Cow genome map

Conread name: Utr1-UTR010022D12

Conread position: 70-813
Cow position:
Alignm length: 750
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 455, 536

Conread position: 93-317
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 17

Conread position: 96-303
Cow position:
Alignm length: 219
Alignm identity: 153
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 96-313
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 48

Conread position: 96-316
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 61, 171

Conread position: 96-350
Cow position:
Alignm length: 273
Alignm identity: 186
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 62, 175

Conread position: 96-352
Cow position:
Alignm length: 261
Alignm identity: 174
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 119

Conread position: 96-356
Cow position:
Alignm length: 274
Alignm identity: 187
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 9

Conread position: 96-358
Cow position:
Alignm length: 267
Alignm identity: 184
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 67, 56

Conread position: 99-284
Cow position:
Alignm length: 192
Alignm identity: 139
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 52, 184

Conread position: 103-310
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 34

Conread position: 107-303
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 208-813
Cow position:
Alignm length: 623
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 23

Conread position: 249-804
Cow position:
Alignm length: 574
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 66

Conread position: 252-626
Cow position:
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 110

Conread position: 252-648
Cow position:
Alignm length: 413
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 42

Conread position: 252-672
Cow position:
Alignm length: 442
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 105

Conread position: 252-686
Cow position:
Alignm length: 461
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 30

Conread position: 252-702
Cow position:
Alignm length: 455
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 273, 58

Conread position: 252-812
Cow position:
Alignm length: 604
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 215

Conread position: 252-813
Cow position:
Alignm length: 587
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 187

Conread position: 252-813
Cow position:
Alignm length: 591
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 590
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 584
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 587
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 30

Conread position: 252-813
Cow position:
Alignm length: 584
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-837
Cow position:
Alignm length: 610
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 19

Conread position: 253-490
Cow position:
Alignm length: 244
Alignm identity: 177
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 41, 185

Conread position: 253-572
Cow position:
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 0

Conread position: 254-526
Cow position:
Alignm length: 285
Alignm identity: 171
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 58, 0

Conread position: 254-597
Cow position:
Alignm length: 364
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-616
Cow position:
Alignm length: 385
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-654
Cow position:
Alignm length: 425
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-673
Cow position:
Alignm length: 445
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-707
Cow position:
Alignm length: 478
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 254-805
Cow position:
Alignm length: 571
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 17

Conread position: 254-813
Cow position:
Alignm length: 585
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-813
Cow position:
Alignm length: 584
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-813
Cow position:
Alignm length: 587
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-824
Cow position:
Alignm length: 597
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 222

Conread position: 255-634
Cow position:
Alignm length: 405
Alignm identity: 274
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 7, 195

Conread position: 255-757
Cow position:
Alignm length: 513
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 199

Conread position: 255-758
Cow position:
Alignm length: 528
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 36

Conread position: 255-777
Cow position:
Alignm length: 544
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 27

Conread position: 255-802
Cow position:
Alignm length: 578
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 168

Conread position: 255-807
Cow position:
Alignm length: 574
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 122

Conread position: 255-808
Cow position:
Alignm length: 577
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 59

Conread position: 255-808
Cow position:
Alignm length: 581
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 255-809
Cow position:
Alignm length: 576
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 294

Conread position: 256-571
Cow position:
Alignm length: 332
Alignm identity: 234
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 56, 21

Conread position: 256-813
Cow position:
Alignm length: 577
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 133

Conread position: 258-591
Cow position:
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 289

Conread position: 258-813
Cow position:
Alignm length: 584
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 89

Conread position: 267-813
Cow position:
Alignm length: 569
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 301-628
Cow position:
Alignm length: 343
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 9

Conread position: 310-532
Cow position:
Alignm length: 230
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 310-555
Cow position:
Alignm length: 252
Alignm identity: 168
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 85, 81

Conread position: 310-598
Cow position:
Alignm length: 307
Alignm identity: 218
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 123, 179

Conread position: 310-616
Cow position:
Alignm length: 322
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 310-805
Cow position:
Alignm length: 515
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 66

Conread position: 310-808
Cow position:
Alignm length: 518
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 72

Conread position: 310-811
Cow position:
Alignm length: 521
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 90

Conread position: 310-813
Cow position:
Alignm length: 518
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 94

Conread position: 310-821
Cow position:
Alignm length: 531
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 208

Conread position: 312-772
Cow position:
Alignm length: 482
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 100

Conread position: 313-812
Cow position:
Alignm length: 521
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 91

Conread position: 319-805
Cow position:
Alignm length: 506
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 35

Conread position: 319-808
Cow position:
Alignm length: 509
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 0

Conread position: 377-767
Cow position:
Alignm length: 409
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 248

Conread position: 383-813
Cow position:
Alignm length: 447
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 82

Conread position: 404-813
Cow position:
Alignm length: 430
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 25

Conread position: 418-813
Cow position:
Alignm length: 403
Alignm identity: 262
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 162, 15

Conread position: 442-813
Cow position:
Alignm length: 388
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 42

Conread position: 458-813
Cow position:
Alignm length: 363
Alignm identity: 186
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 125, 0

Conread position: 467-813
Cow position:
Alignm length: 363
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 473-813
Cow position:
Alignm length: 357
Alignm identity: 246
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 10, 53

Conread position: 489-813
Cow position:
Alignm length: 338
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 495-813
Cow position:
Alignm length: 330
Alignm identity: 221
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 15, 35

Conread position: 517-751
Cow position:
Alignm length: 251
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 134

Conread position: 560-813
Cow position:
Alignm length: 256
Alignm identity: 174
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 200, 84

Conread position: 565-813
Cow position:
Alignm length: 252
Alignm identity: 184
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 76, 95

Conread position: 566-838
Cow position:
Alignm length: 275
Alignm identity: 190
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 74, 84

Conread position: 587-758
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 611-809
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 29, 171

Conread position: 611-813
Cow position:
Alignm length: 207
Alignm identity: 148
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 29, 0

Conread position: 611-813
Cow position:
Alignm length: 206
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.