Cow genome map

Conread name: Utr1-UTR010022D12

Conread position: 92-338
Cow position: chr22:8136465-8136210 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 175
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 66, 193

Conread position: 96-313
Cow position: chr22:32485597-32485374 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 69, 164

Conread position: 96-321
Cow position: chr22:36736505-36736738 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 55

Conread position: 103-246
Cow position: chr22:44609356-44609496 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 14

Conread position: 115-284
Cow position: chr22:36267132-36267302 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 36

Conread position: 214-630
Cow position: chr22:44352737-44352323 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 20

Conread position: 248-802
Cow position: chr22:6502872-6502302 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 117

Conread position: 248-813
Cow position: chr22:11032017-11032595 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 23

Conread position: 250-813
Cow position: chr22:3278097-3277512 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 211

Conread position: 250-813
Cow position: chr22:10909574-10908989 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 116

Conread position: 252-511
Cow position: chr22:1322390-1322659 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 181

Conread position: 252-554
Cow position: chr22:13918094-13918420 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 252-568
Cow position: chr22:1269526-1269194 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 179

Conread position: 252-669
Cow position: chr22:17328470-17328031 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 20

Conread position: 252-724
Cow position: chr22:5308368-5308853 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 448

Conread position: 252-760
Cow position: chr22:560436-559909 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-760
Cow position: chr22:36861261-36860737 (view UCSC Genome Browser custom track)
Alignm length: 526
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 62

Conread position: 252-760
Cow position: chr22:44934248-44934777 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 24

Conread position: 252-790
Cow position: chr22:23853930-23854467 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 114

Conread position: 252-804
Cow position: chr22:35907126-35906571 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 104

Conread position: 252-807
Cow position: chr22:39469254-39468679 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 32

Conread position: 252-813
Cow position: chr22:3306136-3305563 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 9

Conread position: 252-813
Cow position: chr22:19143430-19142842 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 252-813
Cow position: chr22:21589593-21590185 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position: chr22:31313608-31314194 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position: chr22:31334769-31334187 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position: chr22:42991441-42992027 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 20

Conread position: 252-833
Cow position: chr22:44396711-44397310 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 254-533
Cow position: chr22:37132686-37132980 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 141

Conread position: 254-552
Cow position: chr22:16814149-16814459 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-654
Cow position: chr22:8739941-8739527 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 36

Conread position: 254-808
Cow position: chr22:36184026-36184600 (view UCSC Genome Browser custom track)
Alignm length: 576
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 88

Conread position: 254-811
Cow position: chr22:34599674-34600233 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 132

Conread position: 254-813
Cow position: chr22:15313680-15313104 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-813
Cow position: chr22:18816115-18815533 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-813
Cow position: chr22:34168602-34169186 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-836
Cow position: chr22:44369362-44368756 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 97

Conread position: 255-469
Cow position: chr22:15851585-15851810 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 53, 124

Conread position: 255-623
Cow position: chr22:46630779-46630388 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 115

Conread position: 255-653
Cow position: chr22:48004804-48005225 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 143

Conread position: 255-807
Cow position: chr22:37072808-37072243 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 106

Conread position: 256-534
Cow position: chr22:36580531-36580246 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 199
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 17, 102

Conread position: 256-538
Cow position: chr22:525421-525128 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 58, 15

Conread position: 256-808
Cow position: chr22:1879058-1879636 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 105

Conread position: 256-813
Cow position: chr22:326899-326322 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 124

Conread position: 256-813
Cow position: chr22:18027544-18028129 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 256-813
Cow position: chr22:27309508-27308928 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 257-401
Cow position: chr22:1522283-1522435 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 257-813
Cow position: chr22:12731404-12730836 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 433

Conread position: 258-533
Cow position: chr22:11781880-11781593 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 205
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 48, 203

Conread position: 259-808
Cow position: chr22:1520740-1520177 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 152

Conread position: 266-423
Cow position: chr22:44490160-44490325 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 266-778
Cow position: chr22:36269507-36270031 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 18

Conread position: 266-804
Cow position: chr22:5233007-5232442 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 549

Conread position: 266-813
Cow position: chr22:24950377-24950945 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 13

Conread position: 267-808
Cow position: chr22:5940999-5940467 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 21

Conread position: 289-813
Cow position: chr22:24536053-24536574 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 360
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 17, 111

Conread position: 310-460
Cow position: chr22:5932499-5932345 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 310-533
Cow position: chr22:46581261-46581034 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 124, 0

Conread position: 310-616
Cow position: chr22:36552122-36551808 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 214
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 82, 44

Conread position: 310-809
Cow position: chr22:537428-537945 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 14

Conread position: 310-813
Cow position: chr22:693950-694469 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 373

Conread position: 310-813
Cow position: chr22:6020990-6021510 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 204

Conread position: 310-813
Cow position: chr22:20240515-20239995 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 35

Conread position: 310-813
Cow position: chr22:27284359-27284874 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 68

Conread position: 310-813
Cow position: chr22:35672029-35671507 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 319-509
Cow position: chr22:36275772-36275964 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 34

Conread position: 324-554
Cow position: chr22:35942436-35942207 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 64, 30

Conread position: 348-595
Cow position: chr22:291785-291529 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 48, 29

Conread position: 362-813
Cow position: chr22:14629796-14630266 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 366-778
Cow position: chr22:8135724-8135295 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 17

Conread position: 367-813
Cow position: chr22:44457438-44457902 (view UCSC Genome Browser custom track)
Alignm length: 469
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 26

Conread position: 379-689
Cow position: chr22:42988958-42989285 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 407-813
Cow position: chr22:44491457-44491881 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 180

Conread position: 442-601
Cow position: chr22:2627313-2627147 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 457-652
Cow position: chr22:41419031-41418842 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 183, 37

Conread position: 465-801
Cow position: chr22:45930167-45930509 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 228
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 100

Conread position: 493-813
Cow position: chr22:37267681-37268008 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 504-813
Cow position: chr22:11804534-11804209 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 0

Conread position: 523-813
Cow position: chr22:1322768-1323060 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 34, 241

Conread position: 530-786
Cow position: chr22:9287143-9287406 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 25, 161

Conread position: 530-813
Cow position: chr22:36129469-36129762 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 212
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 18, 0

Conread position: 543-797
Cow position: chr22:36276075-36276328 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 179
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 13

Conread position: 551-758
Cow position: chr22:6332298-6332510 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 33, 0

Conread position: 551-802
Cow position: chr22:522814-522557 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 182
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 19

Conread position: 552-813
Cow position: chr22:3802777-3803036 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 181
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 88, 49

Conread position: 558-812
Cow position: chr22:6142791-6142536 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 189
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 26, 99

Conread position: 595-813
Cow position: chr22:35940342-35940126 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 39

Conread position: 612-807
Cow position: chr22:44351019-44350821 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 28, 160

Conread position: 619-833
Cow position: chr22:37293020-37292801 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 639-807
Cow position: chr22:19586220-19586049 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 640-809
Cow position: chr22:28659690-28659518 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Show alignments to all cow chromosomes.