Cow genome map

Conread name: Utr1-UTR010022D12

Conread position: 92-338
Cow position:
Alignm length: 258
Alignm identity: 175
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 66, 193

Conread position: 96-313
Cow position:
Alignm length: 225
Alignm identity: 154
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 69, 164

Conread position: 96-321
Cow position:
Alignm length: 237
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 55

Conread position: 103-246
Cow position:
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 14

Conread position: 115-284
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 36

Conread position: 214-630
Cow position:
Alignm length: 426
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 216, 20

Conread position: 248-802
Cow position:
Alignm length: 579
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 117

Conread position: 248-813
Cow position:
Alignm length: 593
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 23

Conread position: 250-813
Cow position:
Alignm length: 589
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 211

Conread position: 250-813
Cow position:
Alignm length: 589
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 116

Conread position: 252-511
Cow position:
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 181

Conread position: 252-554
Cow position:
Alignm length: 327
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 252-568
Cow position:
Alignm length: 335
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 179

Conread position: 252-669
Cow position:
Alignm length: 442
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 20

Conread position: 252-724
Cow position:
Alignm length: 489
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 448

Conread position: 252-760
Cow position:
Alignm length: 534
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-760
Cow position:
Alignm length: 526
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 62

Conread position: 252-760
Cow position:
Alignm length: 534
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 24

Conread position: 252-790
Cow position:
Alignm length: 554
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 114

Conread position: 252-804
Cow position:
Alignm length: 568
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 104

Conread position: 252-807
Cow position:
Alignm length: 578
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 32

Conread position: 252-813
Cow position:
Alignm length: 587
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 9

Conread position: 252-813
Cow position:
Alignm length: 589
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 252-813
Cow position:
Alignm length: 595
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 589
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 584
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 589
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 20

Conread position: 252-833
Cow position:
Alignm length: 610
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 254-533
Cow position:
Alignm length: 296
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 141

Conread position: 254-552
Cow position:
Alignm length: 311
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-654
Cow position:
Alignm length: 417
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 36

Conread position: 254-808
Cow position:
Alignm length: 576
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 88

Conread position: 254-811
Cow position:
Alignm length: 581
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 132

Conread position: 254-813
Cow position:
Alignm length: 582
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-813
Cow position:
Alignm length: 585
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-813
Cow position:
Alignm length: 587
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-836
Cow position:
Alignm length: 609
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 97

Conread position: 255-469
Cow position:
Alignm length: 228
Alignm identity: 170
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 53, 124

Conread position: 255-623
Cow position:
Alignm length: 393
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 115

Conread position: 255-653
Cow position:
Alignm length: 423
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 143

Conread position: 255-807
Cow position:
Alignm length: 578
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 106

Conread position: 256-534
Cow position:
Alignm length: 291
Alignm identity: 199
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 17, 102

Conread position: 256-538
Cow position:
Alignm length: 296
Alignm identity: 217
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 58, 15

Conread position: 256-808
Cow position:
Alignm length: 580
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 105

Conread position: 256-813
Cow position:
Alignm length: 581
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 124

Conread position: 256-813
Cow position:
Alignm length: 586
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 256-813
Cow position:
Alignm length: 581
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 257-401
Cow position:
Alignm length: 153
Alignm identity: 116
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 257-813
Cow position:
Alignm length: 583
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 433

Conread position: 258-533
Cow position:
Alignm length: 291
Alignm identity: 205
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 48, 203

Conread position: 259-808
Cow position:
Alignm length: 575
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 152

Conread position: 266-423
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 266-778
Cow position:
Alignm length: 538
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 18

Conread position: 266-804
Cow position:
Alignm length: 567
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 549

Conread position: 266-813
Cow position:
Alignm length: 570
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 13

Conread position: 267-808
Cow position:
Alignm length: 550
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 21

Conread position: 289-813
Cow position:
Alignm length: 545
Alignm identity: 360
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 17, 111

Conread position: 310-460
Cow position:
Alignm length: 155
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 310-533
Cow position:
Alignm length: 228
Alignm identity: 162
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 124, 0

Conread position: 310-616
Cow position:
Alignm length: 322
Alignm identity: 214
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 82, 44

Conread position: 310-809
Cow position:
Alignm length: 520
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 14

Conread position: 310-813
Cow position:
Alignm length: 523
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 373

Conread position: 310-813
Cow position:
Alignm length: 523
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 204

Conread position: 310-813
Cow position:
Alignm length: 523
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 35

Conread position: 310-813
Cow position:
Alignm length: 521
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 68

Conread position: 310-813
Cow position:
Alignm length: 523
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 319-509
Cow position:
Alignm length: 194
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 114, 34

Conread position: 324-554
Cow position:
Alignm length: 234
Alignm identity: 160
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 64, 30

Conread position: 348-595
Cow position:
Alignm length: 259
Alignm identity: 179
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 48, 29

Conread position: 362-813
Cow position:
Alignm length: 471
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 366-778
Cow position:
Alignm length: 438
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 17

Conread position: 367-813
Cow position:
Alignm length: 469
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 26

Conread position: 379-689
Cow position:
Alignm length: 328
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 407-813
Cow position:
Alignm length: 426
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 180

Conread position: 442-601
Cow position:
Alignm length: 167
Alignm identity: 127
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 457-652
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 183, 37

Conread position: 465-801
Cow position:
Alignm length: 349
Alignm identity: 228
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 60, 100

Conread position: 493-813
Cow position:
Alignm length: 328
Alignm identity: 191
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 504-813
Cow position:
Alignm length: 326
Alignm identity: 231
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 0

Conread position: 523-813
Cow position:
Alignm length: 295
Alignm identity: 203
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 34, 241

Conread position: 530-786
Cow position:
Alignm length: 266
Alignm identity: 191
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 25, 161

Conread position: 530-813
Cow position:
Alignm length: 294
Alignm identity: 212
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 18, 0

Conread position: 543-797
Cow position:
Alignm length: 263
Alignm identity: 179
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 13

Conread position: 551-758
Cow position:
Alignm length: 213
Alignm identity: 158
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 33, 0

Conread position: 551-802
Cow position:
Alignm length: 259
Alignm identity: 182
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 33, 19

Conread position: 552-813
Cow position:
Alignm length: 266
Alignm identity: 181
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 88, 49

Conread position: 558-812
Cow position:
Alignm length: 261
Alignm identity: 189
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 26, 99

Conread position: 595-813
Cow position:
Alignm length: 222
Alignm identity: 150
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 39

Conread position: 612-807
Cow position:
Alignm length: 200
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 28, 160

Conread position: 619-833
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 639-807
Cow position:
Alignm length: 172
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 640-809
Cow position:
Alignm length: 173
Alignm identity: 121
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Show alignments to all cow chromosomes.