Cow genome map


           Conread name:
           Utr1-UTR010022D12
        

               Conread position:
               92-313
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               59, 159
               

               Conread position:
               92-352
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               65, 179
               

               Conread position:
               96-242
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 40
               

               Conread position:
               96-242
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               96-303
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               153
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               96-303
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               96-313
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               43, 162
               

               Conread position:
               102-313
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               104-303
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               51, 97
               

               Conread position:
               110-242
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               47, 113
               

               Conread position:
               249-571
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               250-572
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 14
               

               Conread position:
               250-813
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 199
               

               Conread position:
               252-388
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-526
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               214
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               44, 30
               

               Conread position:
               252-527
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 227
               

               Conread position:
               252-555
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-607
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-648
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-807
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 21
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 25
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 30
               

               Conread position:
               253-808
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               254-468
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               48, 23
               

               Conread position:
               254-653
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               290
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               58, 17
               

               Conread position:
               254-678
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               307
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               53, 17
               

               Conread position:
               254-775
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 531
               

               Conread position:
               254-813
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 111
               

               Conread position:
               255-468
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               255-638
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 7
               

               Conread position:
               255-693
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 27
               

               Conread position:
               255-713
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 22
               

               Conread position:
               255-787
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 143
               

               Conread position:
               255-809
               

               Cow position:
               
               

               Alignm length:
               579
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 28
               

               Conread position:
               255-813
               

               Cow position:
               
               

               Alignm length:
               593
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 27
               

               Conread position:
               255-813
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 32
               

               Conread position:
               256-469
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               57, 15
               

               Conread position:
               256-552
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 214
               

               Conread position:
               256-654
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 387
               

               Conread position:
               256-681
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 336
               

               Conread position:
               256-813
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 128
               

               Conread position:
               256-815
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 94
               

               Conread position:
               257-509
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               258-631
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 233
               

               Conread position:
               258-813
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 24
               

               Conread position:
               259-622
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               262
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               47, 119
               

               Conread position:
               264-704
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 164
               

               Conread position:
               267-801
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               274-813
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 278
               

               Conread position:
               297-813
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 13
               

               Conread position:
               305-642
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               79, 53
               

               Conread position:
               310-612
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               123, 44
               

               Conread position:
               310-624
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 32
               

               Conread position:
               310-654
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 47
               

               Conread position:
               310-758
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               302
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               127, 62
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 77
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 42
               

               Conread position:
               312-815
               

               Cow position:
               
               

               Alignm length:
               513
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 185
               

               Conread position:
               314-813
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 81
               

               Conread position:
               343-689
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               88, 34
               

               Conread position:
               348-813
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 365
               

               Conread position:
               349-760
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 84
               

               Conread position:
               349-813
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 364
               

               Conread position:
               349-813
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 149
               

               Conread position:
               350-813
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 322
               

               Conread position:
               377-578
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               66, 56
               

               Conread position:
               397-808
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 36
               

               Conread position:
               435-629
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 123
               

               Conread position:
               444-813
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 18
               

               Conread position:
               451-813
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               510-813
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               15, 26
               

               Conread position:
               516-775
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               41, 252
               

               Conread position:
               551-813
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               33, 218
               

               Conread position:
               558-808
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               594-813
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               47, 144
               

               Conread position:
               619-759
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               619-787
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               619-812
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               153
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               21, 78
               

               Conread position:
               619-813
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               21, 91
               

               Conread position:
               639-813
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               125, 60
               
Show alignments to all cow chromosomes.