Cow genome map


           Conread name:
           Utr1-UTR010022D12
        

               Conread position:
               92-303
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               65, 182
               

               Conread position:
               92-303
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               93-303
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 12
               

               Conread position:
               96-242
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               96-246
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               96-259
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               96-303
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               63, 175
               

               Conread position:
               96-352
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 172
               

               Conread position:
               242-837
               

               Cow position:
               
               

               Alignm length:
               626
               

               Alignm identity:
               453
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 41
               

               Conread position:
               250-654
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               292
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               16, 119
               

               Conread position:
               252-423
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               57, 115
               

               Conread position:
               252-533
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               62, 9
               

               Conread position:
               252-607
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 30
               

               Conread position:
               252-615
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 351
               

               Conread position:
               252-677
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 30
               

               Conread position:
               252-771
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 39
               

               Conread position:
               253-463
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               57, 94
               

               Conread position:
               254-413
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               254-624
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 27
               

               Conread position:
               254-758
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               254-775
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 531
               

               Conread position:
               255-677
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 131
               

               Conread position:
               256-532
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               18, 109
               

               Conread position:
               256-602
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 26
               

               Conread position:
               256-760
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 15
               

               Conread position:
               256-813
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               279-799
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               355
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               149, 19
               

               Conread position:
               288-562
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               58, 17
               

               Conread position:
               301-773
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               319
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               142, 52
               

               Conread position:
               303-813
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 82
               

               Conread position:
               308-415
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               310-600
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               310-627
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               74, 101
               

               Conread position:
               310-651
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 157
               

               Conread position:
               310-733
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               288
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               118, 61
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 84
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 123
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 43
               

               Conread position:
               311-612
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               311-642
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               199, 7
               

               Conread position:
               314-808
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               324
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               70, 76
               

               Conread position:
               327-703
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 50
               

               Conread position:
               345-813
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               421-654
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               422-808
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               530-808
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               54, 20
               

               Conread position:
               604-808
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               36, 199
               

               Conread position:
               605-802
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               35, 188
               

               Conread position:
               611-813
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               29, 0
               
Show alignments to all cow chromosomes.