Cow genome map
| Conread name: | Utr1-UTR010022D12 |
| Conread position: | 92-303 |
| Cow position: | chr25:18027855-18027628 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 65, 182 |
| Conread position: | 92-303 |
| Cow position: | chr25:36240321-36240544 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 93-303 |
| Cow position: | chr25:14015953-14016164 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 12 |
| Conread position: | 96-242 |
| Cow position: | chr25:11375568-11375416 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 96-246 |
| Cow position: | chr25:18411513-18411350 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 96-259 |
| Cow position: | chr25:18060808-18060635 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 96-303 |
| Cow position: | chr25:34656667-34656447 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 63, 175 |
| Conread position: | 96-352 |
| Cow position: | chr25:17468915-17468659 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 55, 172 |
| Conread position: | 242-837 |
| Cow position: | chr25:34346717-34346105 (view UCSC Genome Browser custom track) |
| Alignm length: | 626 |
| Alignm identity: | 453 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 41 |
| Conread position: | 250-654 |
| Cow position: | chr25:18422334-18422750 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 292 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 16, 119 |
| Conread position: | 252-423 |
| Cow position: | chr25:33665369-33665192 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 57, 115 |
| Conread position: | 252-533 |
| Cow position: | chr25:17560326-17560035 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 252-607 |
| Cow position: | chr25:18889704-18889330 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 30 |
| Conread position: | 252-615 |
| Cow position: | chr25:18274672-18274289 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 351 |
| Conread position: | 252-677 |
| Cow position: | chr25:34014177-34013722 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 30 |
| Conread position: | 252-771 |
| Cow position: | chr25:12942389-12941838 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 252-813 |
| Cow position: | chr25:26279570-26280138 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 176, 30 |
| Conread position: | 252-813 |
| Cow position: | chr25:26879510-26880081 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 39 |
| Conread position: | 253-463 |
| Cow position: | chr25:18094511-18094731 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 57, 94 |
| Conread position: | 254-413 |
| Cow position: | chr25:35362124-35361957 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 254-624 |
| Cow position: | chr25:11932788-11932406 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 27 |
| Conread position: | 254-758 |
| Cow position: | chr25:6172208-6172737 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 254-775 |
| Cow position: | chr25:13550725-13550181 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 387 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 531 |
| Conread position: | 255-677 |
| Cow position: | chr25:24659566-24660002 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 131 |
| Conread position: | 256-532 |
| Cow position: | chr25:9544375-9544661 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 18, 109 |
| Conread position: | 256-602 |
| Cow position: | chr25:8675230-8675598 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 26 |
| Conread position: | 256-760 |
| Cow position: | chr25:18303714-18304233 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 256-813 |
| Cow position: | chr25:13781344-13781928 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 279-799 |
| Cow position: | chr25:39558073-39557555 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 355 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 149, 19 |
| Conread position: | 288-562 |
| Cow position: | chr25:14958493-14958221 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 301-773 |
| Cow position: | chr25:33258027-33258487 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 319 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 142, 52 |
| Conread position: | 303-813 |
| Cow position: | chr25:12758720-12758194 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 82 |
| Conread position: | 308-415 |
| Cow position: | chr25:25507043-25507149 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 310-600 |
| Cow position: | chr25:20775551-20775254 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 310-627 |
| Cow position: | chr25:18254603-18254280 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 74, 101 |
| Conread position: | 310-651 |
| Cow position: | chr25:18194729-18194374 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 157 |
| Conread position: | 310-733 |
| Cow position: | chr25:24217055-24216632 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 288 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 118, 61 |
| Conread position: | 310-813 |
| Cow position: | chr25:17589185-17588662 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 382 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 310-813 |
| Cow position: | chr25:22147914-22148434 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 84 |
| Conread position: | 310-813 |
| Cow position: | chr25:27022194-27021690 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 123 |
| Conread position: | 310-813 |
| Cow position: | chr25:32580334-32580849 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 43 |
| Conread position: | 311-612 |
| Cow position: | chr25:19917454-19917770 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 311-642 |
| Cow position: | chr25:33244640-33244965 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 199, 7 |
| Conread position: | 314-808 |
| Cow position: | chr25:40918780-40918283 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 324 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 70, 76 |
| Conread position: | 327-703 |
| Cow position: | chr25:18175670-18176057 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 50 |
| Conread position: | 345-813 |
| Cow position: | chr25:20630041-20630524 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 421-654 |
| Cow position: | chr25:33664737-33664487 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 422-808 |
| Cow position: | chr25:25507188-25507593 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 530-808 |
| Cow position: | chr25:17559944-17559662 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 205 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 54, 20 |
| Conread position: | 604-808 |
| Cow position: | chr25:18274087-18273880 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 36, 199 |
| Conread position: | 605-802 |
| Cow position: | chr25:11932392-11932192 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 35, 188 |
| Conread position: | 611-813 |
| Cow position: | chr25:18889055-18888849 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
Show alignments to all cow chromosomes.