Cow genome map

Conread name: Utr1-UTR010022D12

Conread position: 96-242
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 96-258
Cow position:
Alignm length: 171
Alignm identity: 129
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 96-311
Cow position:
Alignm length: 228
Alignm identity: 164
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 97

Conread position: 96-313
Cow position:
Alignm length: 228
Alignm identity: 156
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 55, 12

Conread position: 96-338
Cow position:
Alignm length: 251
Alignm identity: 171
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 85

Conread position: 96-340
Cow position:
Alignm length: 255
Alignm identity: 173
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 61, 107

Conread position: 96-341
Cow position:
Alignm length: 256
Alignm identity: 175
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 98-304
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 53

Conread position: 103-284
Cow position:
Alignm length: 194
Alignm identity: 140
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 38, 126

Conread position: 103-350
Cow position:
Alignm length: 256
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 55, 166

Conread position: 242-532
Cow position:
Alignm length: 296
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 57

Conread position: 250-710
Cow position:
Alignm length: 488
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 252-426
Cow position:
Alignm length: 183
Alignm identity: 143
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 62, 30

Conread position: 252-518
Cow position:
Alignm length: 279
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-533
Cow position:
Alignm length: 294
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 182

Conread position: 252-533
Cow position:
Alignm length: 295
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 25

Conread position: 252-555
Cow position:
Alignm length: 318
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-555
Cow position:
Alignm length: 316
Alignm identity: 209
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 59, 19

Conread position: 252-599
Cow position:
Alignm length: 371
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 30

Conread position: 252-613
Cow position:
Alignm length: 383
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 25

Conread position: 252-722
Cow position:
Alignm length: 488
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-747
Cow position:
Alignm length: 512
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 145

Conread position: 252-760
Cow position:
Alignm length: 535
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 116

Conread position: 252-797
Cow position:
Alignm length: 583
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 37

Conread position: 252-797
Cow position:
Alignm length: 575
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 99

Conread position: 252-804
Cow position:
Alignm length: 574
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 30

Conread position: 252-807
Cow position:
Alignm length: 580
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-808
Cow position:
Alignm length: 587
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 30

Conread position: 252-813
Cow position:
Alignm length: 589
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 25

Conread position: 252-813
Cow position:
Alignm length: 589
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 586
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 593
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 590
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 588
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 30

Conread position: 252-813
Cow position:
Alignm length: 590
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 583
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 254-439
Cow position:
Alignm length: 194
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 58, 19

Conread position: 254-760
Cow position:
Alignm length: 536
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 28

Conread position: 254-760
Cow position:
Alignm length: 524
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 28

Conread position: 254-813
Cow position:
Alignm length: 587
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-813
Cow position:
Alignm length: 572
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 28

Conread position: 254-813
Cow position:
Alignm length: 584
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 255-400
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 255-610
Cow position:
Alignm length: 379
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 255-680
Cow position:
Alignm length: 450
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 43

Conread position: 255-813
Cow position:
Alignm length: 587
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 22

Conread position: 255-813
Cow position:
Alignm length: 583
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 27

Conread position: 256-757
Cow position:
Alignm length: 514
Alignm identity: 203
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 56, 0

Conread position: 256-813
Cow position:
Alignm length: 575
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 106

Conread position: 256-813
Cow position:
Alignm length: 582
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 350

Conread position: 258-815
Cow position:
Alignm length: 581
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 21

Conread position: 266-813
Cow position:
Alignm length: 567
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 24

Conread position: 267-813
Cow position:
Alignm length: 573
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 84

Conread position: 274-645
Cow position:
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 274-805
Cow position:
Alignm length: 559
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 351

Conread position: 276-813
Cow position:
Alignm length: 578
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 90

Conread position: 288-744
Cow position:
Alignm length: 469
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 106

Conread position: 307-801
Cow position:
Alignm length: 512
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 46

Conread position: 308-813
Cow position:
Alignm length: 520
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 103

Conread position: 310-540
Cow position:
Alignm length: 236
Alignm identity: 138
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 54, 0

Conread position: 310-623
Cow position:
Alignm length: 326
Alignm identity: 214
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 40, 87

Conread position: 310-759
Cow position:
Alignm length: 467
Alignm identity: 301
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 118, 45

Conread position: 310-778
Cow position:
Alignm length: 487
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 165

Conread position: 310-813
Cow position:
Alignm length: 523
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 0

Conread position: 310-813
Cow position:
Alignm length: 514
Alignm identity: 321
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 124, 182

Conread position: 310-813
Cow position:
Alignm length: 525
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 404

Conread position: 311-491
Cow position:
Alignm length: 184
Alignm identity: 141
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 122, 93

Conread position: 311-492
Cow position:
Alignm length: 185
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 126, 74

Conread position: 312-655
Cow position:
Alignm length: 361
Alignm identity: 239
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 50

Conread position: 312-776
Cow position:
Alignm length: 490
Alignm identity: 325
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 110, 65

Conread position: 312-813
Cow position:
Alignm length: 520
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 46

Conread position: 338-492
Cow position:
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 95, 0

Conread position: 355-809
Cow position:
Alignm length: 479
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 5

Conread position: 367-663
Cow position:
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 130

Conread position: 379-600
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 6, 55

Conread position: 404-638
Cow position:
Alignm length: 243
Alignm identity: 170
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 39, 29

Conread position: 413-718
Cow position:
Alignm length: 310
Alignm identity: 211
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 24, 73

Conread position: 418-813
Cow position:
Alignm length: 413
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 78

Conread position: 435-683
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 92

Conread position: 442-813
Cow position:
Alignm length: 388
Alignm identity: 266
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 60, 36

Conread position: 505-813
Cow position:
Alignm length: 314
Alignm identity: 214
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 91, 11

Conread position: 520-813
Cow position:
Alignm length: 302
Alignm identity: 211
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 37, 69

Conread position: 530-760
Cow position:
Alignm length: 240
Alignm identity: 175
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 22, 81

Conread position: 532-687
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 543-813
Cow position:
Alignm length: 274
Alignm identity: 185
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 112

Conread position: 583-810
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 8, 175

Show alignments to all cow chromosomes.