Cow genome map
| Conread name: | Utr1-UTR010022D12 |
| Conread position: | 92-313 |
| Cow position: | chr3:21945742-21945514 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 25, 16 |
| Conread position: | 96-236 |
| Cow position: | chr3:70083979-70083834 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 12 |
| Conread position: | 96-242 |
| Cow position: | chr3:5829965-5829811 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 96-303 |
| Cow position: | chr3:2653774-2653989 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 96-303 |
| Cow position: | chr3:31898309-31898093 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 46, 174 |
| Conread position: | 96-303 |
| Cow position: | chr3:55230030-55229813 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 62, 173 |
| Conread position: | 96-313 |
| Cow position: | chr3:17952025-17952255 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 54, 175 |
| Conread position: | 96-328 |
| Cow position: | chr3:3806023-3806252 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 69, 145 |
| Conread position: | 96-352 |
| Cow position: | chr3:39326355-39326617 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 65, 47 |
| Conread position: | 96-356 |
| Cow position: | chr3:31354590-31354325 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 193 |
| Conread position: | 96-358 |
| Cow position: | chr3:63005485-63005212 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 25, 38 |
| Conread position: | 101-314 |
| Cow position: | chr3:2909424-2909200 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 52, 11 |
| Conread position: | 103-303 |
| Cow position: | chr3:66638410-66638623 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 55, 168 |
| Conread position: | 104-246 |
| Cow position: | chr3:472208-472355 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 104-265 |
| Cow position: | chr3:52865077-52864908 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 51, 121 |
| Conread position: | 108-284 |
| Cow position: | chr3:45869527-45869351 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 54, 44 |
| Conread position: | 166-638 |
| Cow position: | chr3:26836649-26836209 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 328 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 59, 34 |
| Conread position: | 234-616 |
| Cow position: | chr3:49272311-49271915 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 76, 27 |
| Conread position: | 235-813 |
| Cow position: | chr3:66620350-66620958 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 44 |
| Conread position: | 242-813 |
| Cow position: | chr3:72630256-72630850 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 40 |
| Conread position: | 249-588 |
| Cow position: | chr3:51940219-51939880 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 248 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 27, 62 |
| Conread position: | 249-813 |
| Cow position: | chr3:19939072-19939667 (view UCSC Genome Browser custom track) |
| Alignm length: | 598 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 249-813 |
| Cow position: | chr3:50915518-50916113 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 250-801 |
| Cow position: | chr3:48230262-48229710 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 102 |
| Conread position: | 250-813 |
| Cow position: | chr3:56340235-56339644 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 536 |
| Conread position: | 251-813 |
| Cow position: | chr3:59861562-59862147 (view UCSC Genome Browser custom track) |
| Alignm length: | 588 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 31 |
| Conread position: | 251-813 |
| Cow position: | chr3:68699772-68699189 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 15 |
| Conread position: | 252-416 |
| Cow position: | chr3:48060635-48060463 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 44, 30 |
| Conread position: | 252-485 |
| Cow position: | chr3:64357643-64357411 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 32, 62 |
| Conread position: | 252-523 |
| Cow position: | chr3:77424000-77424284 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 252-533 |
| Cow position: | chr3:36881725-36881430 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 252-638 |
| Cow position: | chr3:50011868-50012267 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 252-648 |
| Cow position: | chr3:18542211-18541796 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 252-679 |
| Cow position: | chr3:5995505-5995054 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 30 |
| Conread position: | 252-759 |
| Cow position: | chr3:32841829-32841300 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 31 |
| Conread position: | 252-799 |
| Cow position: | chr3:32616807-32616234 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 88 |
| Conread position: | 252-802 |
| Cow position: | chr3:5883735-5884307 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 31 |
| Conread position: | 252-807 |
| Cow position: | chr3:34030702-34030136 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 252-808 |
| Cow position: | chr3:30314764-30315333 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 30 |
| Conread position: | 252-809 |
| Cow position: | chr3:58947821-58948386 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 154 |
| Conread position: | 252-813 |
| Cow position: | chr3:2907562-2906996 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 14 |
| Conread position: | 252-813 |
| Cow position: | chr3:10239850-10240431 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 252-813 |
| Cow position: | chr3:18811697-18812283 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 30 |
| Conread position: | 252-813 |
| Cow position: | chr3:19756762-19756174 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 252-813 |
| Cow position: | chr3:23290150-23289560 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 194 |
| Conread position: | 252-813 |
| Cow position: | chr3:40823584-40824166 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 252-813 |
| Cow position: | chr3:49545010-49544435 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 162 |
| Conread position: | 252-813 |
| Cow position: | chr3:53515810-53516386 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 20 |
| Conread position: | 252-813 |
| Cow position: | chr3:75040973-75040386 (view UCSC Genome Browser custom track) |
| Alignm length: | 589 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 31 |
| Conread position: | 252-813 |
| Cow position: | chr3:78027213-78026645 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 30 |
| Conread position: | 252-817 |
| Cow position: | chr3:24643384-24643969 (view UCSC Genome Browser custom track) |
| Alignm length: | 597 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 94 |
| Conread position: | 252-817 |
| Cow position: | chr3:83233041-83232463 (view UCSC Genome Browser custom track) |
| Alignm length: | 594 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 41 |
| Conread position: | 253-615 |
| Cow position: | chr3:6878858-6878496 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 18 |
| Conread position: | 253-700 |
| Cow position: | chr3:52863939-52863470 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 109 |
| Conread position: | 254-475 |
| Cow position: | chr3:24591120-24590898 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 60, 37 |
| Conread position: | 254-615 |
| Cow position: | chr3:31415736-31416106 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 253 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 19, 112 |
| Conread position: | 254-616 |
| Cow position: | chr3:15178899-15179275 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 56, 105 |
| Conread position: | 254-670 |
| Cow position: | chr3:1516346-1516784 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 416 |
| Conread position: | 254-728 |
| Cow position: | chr3:64027895-64027396 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 254-805 |
| Cow position: | chr3:18463367-18462803 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 254-809 |
| Cow position: | chr3:49137340-49136777 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 28 |
| Conread position: | 254-811 |
| Cow position: | chr3:42432429-42432994 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 138 |
| Conread position: | 254-813 |
| Cow position: | chr3:6686005-6686584 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 114 |
| Conread position: | 254-813 |
| Cow position: | chr3:19736771-19737357 (view UCSC Genome Browser custom track) |
| Alignm length: | 587 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 254-813 |
| Cow position: | chr3:21182488-21181926 (view UCSC Genome Browser custom track) |
| Alignm length: | 580 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 28 |
| Conread position: | 254-813 |
| Cow position: | chr3:63003348-63002769 (view UCSC Genome Browser custom track) |
| Alignm length: | 586 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 18 |
| Conread position: | 255-398 |
| Cow position: | chr3:19944242-19944393 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 255-532 |
| Cow position: | chr3:4027953-4028224 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 204 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 30, 42 |
| Conread position: | 255-533 |
| Cow position: | chr3:66991293-66991570 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 59, 22 |
| Conread position: | 255-653 |
| Cow position: | chr3:18356304-18355888 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 40 |
| Conread position: | 255-662 |
| Cow position: | chr3:594776-595204 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 27 |
| Conread position: | 255-808 |
| Cow position: | chr3:5953987-5953411 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 27 |
| Conread position: | 255-813 |
| Cow position: | chr3:36117854-36118437 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 236 |
| Conread position: | 255-813 |
| Cow position: | chr3:57484531-57483952 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 143 |
| Conread position: | 255-813 |
| Cow position: | chr3:64017166-64016589 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 16 |
| Conread position: | 256-550 |
| Cow position: | chr3:19721970-19721659 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 256-637 |
| Cow position: | chr3:42631631-42632018 (view UCSC Genome Browser custom track) |
| Alignm length: | 396 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 137, 15 |
| Conread position: | 256-743 |
| Cow position: | chr3:21148505-21148024 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 318 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 180, 15 |
| Conread position: | 256-808 |
| Cow position: | chr3:3523214-3523791 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 221 |
| Conread position: | 256-813 |
| Cow position: | chr3:7481032-7480454 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 26 |
| Conread position: | 256-813 |
| Cow position: | chr3:18859607-18860187 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 106 |
| Conread position: | 256-813 |
| Cow position: | chr3:37969241-37969816 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 91 |
| Conread position: | 256-813 |
| Cow position: | chr3:40339919-40339338 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 256-813 |
| Cow position: | chr3:46679624-46680204 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 217 |
| Conread position: | 256-813 |
| Cow position: | chr3:46861110-46860527 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 257-808 |
| Cow position: | chr3:45895357-45894781 (view UCSC Genome Browser custom track) |
| Alignm length: | 585 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 104 |
| Conread position: | 257-808 |
| Cow position: | chr3:45974698-45975272 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 104 |
| Conread position: | 257-808 |
| Cow position: | chr3:46502734-46503316 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 258-671 |
| Cow position: | chr3:49333986-49334420 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 298 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 48, 111 |
| Conread position: | 258-772 |
| Cow position: | chr3:43415355-43415876 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 344 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 14, 349 |
| Conread position: | 258-813 |
| Cow position: | chr3:23213871-23213302 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 99 |
| Conread position: | 264-813 |
| Cow position: | chr3:49677999-49678576 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 209 |
| Conread position: | 267-638 |
| Cow position: | chr3:49613773-49613383 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 328 |
| Conread position: | 267-805 |
| Cow position: | chr3:20380747-20381309 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 267-805 |
| Cow position: | chr3:29331067-29330515 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 337 |
| Conread position: | 267-813 |
| Cow position: | chr3:2917665-2918237 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 411 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 84 |
| Conread position: | 267-813 |
| Cow position: | chr3:32622833-32622268 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 267-813 |
| Cow position: | chr3:68873551-68872979 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 404 |
| Conread position: | 274-590 |
| Cow position: | chr3:3981965-3982294 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 28, 136 |
| Conread position: | 274-813 |
| Cow position: | chr3:64650837-64651403 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 278-497 |
| Cow position: | chr3:74439527-74439748 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 20, 12 |
| Conread position: | 282-756 |
| Cow position: | chr3:21259691-21259200 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 93 |
| Conread position: | 290-643 |
| Cow position: | chr3:18575961-18575595 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 17, 183 |
| Conread position: | 292-808 |
| Cow position: | chr3:37625209-37625737 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 128 |
| Conread position: | 308-573 |
| Cow position: | chr3:3054936-3055199 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 126, 6 |
| Conread position: | 310-509 |
| Cow position: | chr3:7169047-7169250 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 310-704 |
| Cow position: | chr3:22336143-22336554 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 310-733 |
| Cow position: | chr3:77443616-77444043 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 123 |
| Conread position: | 310-799 |
| Cow position: | chr3:4737718-4737199 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 128 |
| Conread position: | 310-805 |
| Cow position: | chr3:47081156-47080646 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 337 |
| Conread position: | 310-808 |
| Cow position: | chr3:6782639-6783138 (view UCSC Genome Browser custom track) |
| Alignm length: | 513 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 155 |
| Conread position: | 310-808 |
| Cow position: | chr3:19878912-19879424 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 306 |
| Conread position: | 310-808 |
| Cow position: | chr3:66890708-66890194 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 310-809 |
| Cow position: | chr3:45774151-45773632 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 235 |
| Conread position: | 310-813 |
| Cow position: | chr3:7158461-7157950 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 299 |
| Conread position: | 310-813 |
| Cow position: | chr3:24314722-24315243 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 172 |
| Conread position: | 310-813 |
| Cow position: | chr3:27918690-27919197 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 172 |
| Conread position: | 310-813 |
| Cow position: | chr3:29578888-29579400 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 256 |
| Conread position: | 310-813 |
| Cow position: | chr3:41211482-41210959 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 341 |
| Conread position: | 310-813 |
| Cow position: | chr3:42995425-42994898 (view UCSC Genome Browser custom track) |
| Alignm length: | 529 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 193 |
| Conread position: | 310-813 |
| Cow position: | chr3:45032995-45033522 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 310-837 |
| Cow position: | chr3:14439506-14438969 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 321 |
| Conread position: | 311-590 |
| Cow position: | chr3:48842427-48842714 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 311-668 |
| Cow position: | chr3:16888785-16888419 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 238 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 126, 49 |
| Conread position: | 312-698 |
| Cow position: | chr3:33846542-33846144 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 258 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 125, 74 |
| Conread position: | 312-758 |
| Cow position: | chr3:79432449-79431985 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 193, 91 |
| Conread position: | 323-537 |
| Cow position: | chr3:54341986-54341772 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 26, 142 |
| Conread position: | 326-813 |
| Cow position: | chr3:42052876-42052370 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 109 |
| Conread position: | 343-743 |
| Cow position: | chr3:51242660-51243074 (view UCSC Genome Browser custom track) |
| Alignm length: | 416 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 351 |
| Conread position: | 345-554 |
| Cow position: | chr3:60208315-60208104 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 88, 138 |
| Conread position: | 349-495 |
| Cow position: | chr3:45238082-45237933 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 85, 38 |
| Conread position: | 366-813 |
| Cow position: | chr3:47177965-47177498 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 369-753 |
| Cow position: | chr3:66367511-66367921 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 274 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 35, 314 |
| Conread position: | 377-795 |
| Cow position: | chr3:52861811-52862233 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 295 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 39, 32 |
| Conread position: | 378-653 |
| Cow position: | chr3:4286121-4286412 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 394-683 |
| Cow position: | chr3:83294547-83294244 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 49, 42 |
| Conread position: | 394-813 |
| Cow position: | chr3:24353286-24353682 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 290 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 195, 46 |
| Conread position: | 399-813 |
| Cow position: | chr3:2710521-2710094 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 225 |
| Conread position: | 405-649 |
| Cow position: | chr3:48059079-48058818 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 405-813 |
| Cow position: | chr3:19944607-19945004 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 283 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 31, 201 |
| Conread position: | 434-797 |
| Cow position: | chr3:64357407-64357032 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 159 |
| Conread position: | 436-813 |
| Cow position: | chr3:38493636-38494010 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 273 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 7, 159 |
| Conread position: | 441-758 |
| Cow position: | chr3:19890209-19889883 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 84, 107 |
| Conread position: | 457-813 |
| Cow position: | chr3:50127230-50126859 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 357 |
| Conread position: | 470-804 |
| Cow position: | chr3:24589584-24589242 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 6.99949e-42 |
| Alignm gaps (pig, cow): | 55, 18 |
| Conread position: | 471-813 |
| Cow position: | chr3:19800759-19800402 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 258 |
| Conread position: | 500-807 |
| Cow position: | chr3:7247128-7247445 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 25, 101 |
| Conread position: | 530-802 |
| Cow position: | chr3:42447589-42447871 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 205 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 530-813 |
| Cow position: | chr3:4028371-4028670 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 264 |
| Conread position: | 531-714 |
| Cow position: | chr3:13967526-13967335 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 531-813 |
| Cow position: | chr3:39880101-39880382 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 97 |
| Conread position: | 532-722 |
| Cow position: | chr3:34091008-34090813 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 24, 39 |
| Conread position: | 541-808 |
| Cow position: | chr3:19721175-19720903 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 16, 89 |
| Conread position: | 558-813 |
| Cow position: | chr3:56145799-56146061 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 122 |
| Conread position: | 561-813 |
| Cow position: | chr3:30331970-30331711 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 571-802 |
| Cow position: | chr3:3841277-3841047 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 69, 184 |
| Conread position: | 581-813 |
| Cow position: | chr3:53411721-53411957 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 13, 129 |
| Conread position: | 583-776 |
| Cow position: | chr3:52727155-52727348 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 8, 116 |
| Conread position: | 611-756 |
| Cow position: | chr3:15179500-15179648 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 108 |
| Conread position: | 611-815 |
| Cow position: | chr3:56098786-56098994 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 29, 35 |
| Conread position: | 612-800 |
| Cow position: | chr3:34845709-34845899 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 54, 171 |
| Conread position: | 623-813 |
| Cow position: | chr3:2869360-2869554 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 628-813 |
| Cow position: | chr3:6877578-6877397 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 12, 35 |
Show alignments to all cow chromosomes.