Cow genome map


           Conread name:
           Utr1-UTR010022D12
        

               Conread position:
               91-241
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               84, 52
               

               Conread position:
               96-303
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               96-303
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               57, 21
               

               Conread position:
               104-303
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               54, 108
               

               Conread position:
               252-490
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               252-492
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-492
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 59
               

               Conread position:
               252-539
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-602
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 30
               

               Conread position:
               252-636
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 30
               

               Conread position:
               252-648
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-720
               

               Cow position:
               
               

               Alignm length:
               502
               

               Alignm identity:
               330
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               10, 99
               

               Conread position:
               252-802
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 20
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               590
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               588
               

               Alignm identity:
               451
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 529
               

               Conread position:
               252-813
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 15
               

               Conread position:
               254-459
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               254-612
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               55, 34
               

               Conread position:
               254-628
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 28
               

               Conread position:
               254-723
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 28
               

               Conread position:
               254-802
               

               Cow position:
               
               

               Alignm length:
               583
               

               Alignm identity:
               379
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               22, 198
               

               Conread position:
               254-813
               

               Cow position:
               
               

               Alignm length:
               587
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 18
               

               Conread position:
               254-813
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 190
               

               Conread position:
               254-813
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 28
               

               Conread position:
               255-760
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 27
               

               Conread position:
               255-813
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 27
               

               Conread position:
               255-813
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               256-718
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               314
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               25, 91
               

               Conread position:
               256-813
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 347
               

               Conread position:
               256-813
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 364
               

               Conread position:
               256-815
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 349
               

               Conread position:
               257-695
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 25
               

               Conread position:
               264-590
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 210
               

               Conread position:
               266-631
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 11
               

               Conread position:
               267-813
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 507
               

               Conread position:
               278-778
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 20
               

               Conread position:
               279-813
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 102
               

               Conread position:
               288-531
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               24, 175
               

               Conread position:
               288-808
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               332
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 25
               

               Conread position:
               305-573
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               24, 5
               

               Conread position:
               310-455
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               310-611
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               50, 309
               

               Conread position:
               310-649
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               235
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               52, 83
               

               Conread position:
               310-649
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               50, 95
               

               Conread position:
               310-713
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 50
               

               Conread position:
               310-717
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 82
               

               Conread position:
               310-760
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 395
               

               Conread position:
               310-808
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 75
               

               Conread position:
               310-808
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 393
               

               Conread position:
               310-808
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               520
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 58
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 93
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               310-813
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 0
               

               Conread position:
               311-554
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               77, 84
               

               Conread position:
               311-812
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               321
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               129, 62
               

               Conread position:
               314-590
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               210
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               314-665
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               66, 76
               

               Conread position:
               317-616
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               119, 45
               

               Conread position:
               319-813
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 394
               

               Conread position:
               372-813
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 115
               

               Conread position:
               376-758
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               267
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               66, 132
               

               Conread position:
               377-817
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               299
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               60, 307
               

               Conread position:
               391-802
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 315
               

               Conread position:
               391-813
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               394-788
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               269
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               126, 42
               

               Conread position:
               435-813
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               269
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               8, 56
               

               Conread position:
               448-814
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               248
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               79, 42
               

               Conread position:
               464-801
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 316
               

               Conread position:
               479-813
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               487-805
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               38, 112
               

               Conread position:
               504-813
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               21, 199
               

               Conread position:
               511-813
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               46, 7
               

               Conread position:
               551-813
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               33, 23
               

               Conread position:
               559-813
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               564-824
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               16, 223
               

               Conread position:
               579-813
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               9, 61
               

               Conread position:
               591-772
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               49, 119
               

               Conread position:
               622-802
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               18, 102
               
Show alignments to all cow chromosomes.