Cow genome map

Conread name: Utr1-UTR010022D12

Conread position: 80-284
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 149

Conread position: 92-302
Cow position:
Alignm length: 217
Alignm identity: 157
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 79, 65

Conread position: 92-313
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 59, 175

Conread position: 96-242
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 96-246
Cow position:
Alignm length: 159
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 61, 145

Conread position: 96-266
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 79, 55

Conread position: 96-328
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 82, 63

Conread position: 103-361
Cow position:
Alignm length: 266
Alignm identity: 176
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 53, 139

Conread position: 110-247
Cow position:
Alignm length: 143
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 42, 0

Conread position: 231-620
Cow position:
Alignm length: 408
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 341

Conread position: 234-813
Cow position:
Alignm length: 582
Alignm identity: 106
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 526, 0

Conread position: 249-645
Cow position:
Alignm length: 429
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 11

Conread position: 249-813
Cow position:
Alignm length: 581
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 22

Conread position: 252-409
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 55, 0

Conread position: 252-518
Cow position:
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 222

Conread position: 252-673
Cow position:
Alignm length: 438
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 110

Conread position: 252-713
Cow position:
Alignm length: 476
Alignm identity: 318
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 29, 164

Conread position: 252-762
Cow position:
Alignm length: 538
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 148

Conread position: 252-802
Cow position:
Alignm length: 592
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 252-809
Cow position:
Alignm length: 582
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 586
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 580
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 29

Conread position: 252-813
Cow position:
Alignm length: 587
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 30

Conread position: 252-813
Cow position:
Alignm length: 589
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 31

Conread position: 252-813
Cow position:
Alignm length: 587
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 584
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 384

Conread position: 252-813
Cow position:
Alignm length: 589
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 30

Conread position: 252-813
Cow position:
Alignm length: 592
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 30

Conread position: 252-813
Cow position:
Alignm length: 587
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 253-808
Cow position:
Alignm length: 581
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 29

Conread position: 254-486
Cow position:
Alignm length: 244
Alignm identity: 186
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 60, 28

Conread position: 254-505
Cow position:
Alignm length: 264
Alignm identity: 186
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 58, 0

Conread position: 254-531
Cow position:
Alignm length: 290
Alignm identity: 208
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 58, 259

Conread position: 254-813
Cow position:
Alignm length: 589
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-813
Cow position:
Alignm length: 587
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-813
Cow position:
Alignm length: 587
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 255-422
Cow position:
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 255-615
Cow position:
Alignm length: 384
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 255-775
Cow position:
Alignm length: 544
Alignm identity: 333
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 52, 9

Conread position: 255-813
Cow position:
Alignm length: 585
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 505

Conread position: 255-813
Cow position:
Alignm length: 583
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 27

Conread position: 256-722
Cow position:
Alignm length: 489
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 235

Conread position: 256-805
Cow position:
Alignm length: 577
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 8

Conread position: 256-808
Cow position:
Alignm length: 578
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 256-813
Cow position:
Alignm length: 577
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 59

Conread position: 256-813
Cow position:
Alignm length: 582
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 437

Conread position: 256-813
Cow position:
Alignm length: 578
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 15

Conread position: 256-813
Cow position:
Alignm length: 575
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 292

Conread position: 267-649
Cow position:
Alignm length: 406
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 267-760
Cow position:
Alignm length: 518
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 98

Conread position: 267-760
Cow position:
Alignm length: 519
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 267-813
Cow position:
Alignm length: 576
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 164

Conread position: 267-813
Cow position:
Alignm length: 574
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 268-813
Cow position:
Alignm length: 566
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 0

Conread position: 274-572
Cow position:
Alignm length: 318
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 274-813
Cow position:
Alignm length: 567
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 440

Conread position: 279-813
Cow position:
Alignm length: 542
Alignm identity: 353
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 100, 31

Conread position: 283-813
Cow position:
Alignm length: 546
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 290-813
Cow position:
Alignm length: 540
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 20

Conread position: 292-801
Cow position:
Alignm length: 524
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 199

Conread position: 301-532
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 27, 58

Conread position: 310-456
Cow position:
Alignm length: 150
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 71, 124

Conread position: 310-491
Cow position:
Alignm length: 185
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 123, 20

Conread position: 310-612
Cow position:
Alignm length: 317
Alignm identity: 227
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 123, 0

Conread position: 310-616
Cow position:
Alignm length: 330
Alignm identity: 225
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 123, 0

Conread position: 310-760
Cow position:
Alignm length: 470
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 59

Conread position: 310-762
Cow position:
Alignm length: 459
Alignm identity: 292
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 127, 83

Conread position: 310-801
Cow position:
Alignm length: 509
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 408

Conread position: 310-802
Cow position:
Alignm length: 508
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 20

Conread position: 310-805
Cow position:
Alignm length: 511
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 310-808
Cow position:
Alignm length: 519
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 48

Conread position: 310-809
Cow position:
Alignm length: 524
Alignm identity: 342
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 37, 195

Conread position: 310-813
Cow position:
Alignm length: 523
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 67

Conread position: 310-813
Cow position:
Alignm length: 525
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 432

Conread position: 310-813
Cow position:
Alignm length: 523
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 310-813
Cow position:
Alignm length: 516
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 211, 115

Conread position: 310-813
Cow position:
Alignm length: 523
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 388

Conread position: 310-813
Cow position:
Alignm length: 522
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 310-815
Cow position:
Alignm length: 523
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 362

Conread position: 310-834
Cow position:
Alignm length: 547
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 242

Conread position: 312-715
Cow position:
Alignm length: 417
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 85

Conread position: 313-700
Cow position:
Alignm length: 403
Alignm identity: 271
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 14, 125

Conread position: 321-497
Cow position:
Alignm length: 181
Alignm identity: 138
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 113, 0

Conread position: 326-616
Cow position:
Alignm length: 303
Alignm identity: 218
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 107, 35

Conread position: 332-815
Cow position:
Alignm length: 501
Alignm identity: 322
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 196, 51

Conread position: 343-813
Cow position:
Alignm length: 490
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 355

Conread position: 350-743
Cow position:
Alignm length: 410
Alignm identity: 267
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 87, 11

Conread position: 355-813
Cow position:
Alignm length: 478
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 372-805
Cow position:
Alignm length: 447
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 26

Conread position: 378-533
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 131

Conread position: 380-805
Cow position:
Alignm length: 443
Alignm identity: 300
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 57, 209

Conread position: 381-778
Cow position:
Alignm length: 414
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 10

Conread position: 391-808
Cow position:
Alignm length: 439
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 379

Conread position: 391-813
Cow position:
Alignm length: 437
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 393-813
Cow position:
Alignm length: 437
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 72

Conread position: 394-813
Cow position:
Alignm length: 436
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 160

Conread position: 405-813
Cow position:
Alignm length: 424
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 405

Conread position: 408-544
Cow position:
Alignm length: 141
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 28, 131

Conread position: 418-813
Cow position:
Alignm length: 416
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 435-813
Cow position:
Alignm length: 397
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 442-813
Cow position:
Alignm length: 388
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 442-822
Cow position:
Alignm length: 408
Alignm identity: 286
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 84, 136

Conread position: 466-676
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 59, 0

Conread position: 470-765
Cow position:
Alignm length: 303
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 29, 15

Conread position: 474-813
Cow position:
Alignm length: 356
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 0

Conread position: 484-813
Cow position:
Alignm length: 346
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 484-813
Cow position:
Alignm length: 346
Alignm identity: 241
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 41, 0

Conread position: 503-813
Cow position:
Alignm length: 330
Alignm identity: 227
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 22, 10

Conread position: 528-813
Cow position:
Alignm length: 297
Alignm identity: 206
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 21, 190

Conread position: 532-813
Cow position:
Alignm length: 292
Alignm identity: 214
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 23, 200

Conread position: 533-770
Cow position:
Alignm length: 245
Alignm identity: 169
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 23, 117

Conread position: 564-813
Cow position:
Alignm length: 256
Alignm identity: 178
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 17, 210

Conread position: 587-813
Cow position:
Alignm length: 231
Alignm identity: 160
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 53, 0

Conread position: 588-802
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 141

Conread position: 605-813
Cow position:
Alignm length: 213
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 619-813
Cow position:
Alignm length: 198
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 145

Conread position: 633-813
Cow position:
Alignm length: 186
Alignm identity: 130
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 7, 0

Show alignments to all cow chromosomes.