Cow genome map

Conread name: Utr1-UTR010022D12

Conread position: 96-242
Cow position:
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 96-293
Cow position:
Alignm length: 203
Alignm identity: 142
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 88, 60

Conread position: 96-302
Cow position:
Alignm length: 218
Alignm identity: 151
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 137

Conread position: 96-302
Cow position:
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 133

Conread position: 96-314
Cow position:
Alignm length: 232
Alignm identity: 159
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 96-317
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 63, 42

Conread position: 97-303
Cow position:
Alignm length: 216
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 82, 59

Conread position: 98-303
Cow position:
Alignm length: 221
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 130

Conread position: 117-338
Cow position:
Alignm length: 230
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 19

Conread position: 213-813
Cow position:
Alignm length: 628
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 136

Conread position: 231-836
Cow position:
Alignm length: 639
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 265

Conread position: 233-809
Cow position:
Alignm length: 607
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 19

Conread position: 234-813
Cow position:
Alignm length: 595
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 45

Conread position: 249-572
Cow position:
Alignm length: 336
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 33

Conread position: 249-801
Cow position:
Alignm length: 574
Alignm identity: 381
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 18, 32

Conread position: 252-394
Cow position:
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 30

Conread position: 252-401
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 108

Conread position: 252-431
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 0

Conread position: 252-523
Cow position:
Alignm length: 283
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-554
Cow position:
Alignm length: 320
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 30

Conread position: 252-625
Cow position:
Alignm length: 392
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 30

Conread position: 252-629
Cow position:
Alignm length: 396
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 30

Conread position: 252-633
Cow position:
Alignm length: 399
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 9

Conread position: 252-636
Cow position:
Alignm length: 401
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 42

Conread position: 252-673
Cow position:
Alignm length: 447
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-689
Cow position:
Alignm length: 462
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-751
Cow position:
Alignm length: 531
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 18

Conread position: 252-758
Cow position:
Alignm length: 530
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-760
Cow position:
Alignm length: 524
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 32

Conread position: 252-765
Cow position:
Alignm length: 530
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 19

Conread position: 252-813
Cow position:
Alignm length: 587
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 252-813
Cow position:
Alignm length: 583
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 42

Conread position: 252-813
Cow position:
Alignm length: 589
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 585
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 30

Conread position: 252-813
Cow position:
Alignm length: 583
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 253-758
Cow position:
Alignm length: 526
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 29

Conread position: 254-533
Cow position:
Alignm length: 293
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 23

Conread position: 254-554
Cow position:
Alignm length: 327
Alignm identity: 225
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 304

Conread position: 254-639
Cow position:
Alignm length: 406
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-649
Cow position:
Alignm length: 417
Alignm identity: 283
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 57, 23

Conread position: 254-702
Cow position:
Alignm length: 460
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 292

Conread position: 254-758
Cow position:
Alignm length: 530
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-758
Cow position:
Alignm length: 530
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-805
Cow position:
Alignm length: 575
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 353

Conread position: 254-818
Cow position:
Alignm length: 603
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 221

Conread position: 255-563
Cow position:
Alignm length: 330
Alignm identity: 216
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 194

Conread position: 255-578
Cow position:
Alignm length: 344
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 18

Conread position: 255-615
Cow position:
Alignm length: 376
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 27

Conread position: 255-626
Cow position:
Alignm length: 390
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 16

Conread position: 255-760
Cow position:
Alignm length: 527
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 64

Conread position: 255-776
Cow position:
Alignm length: 546
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 27

Conread position: 255-813
Cow position:
Alignm length: 584
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 449

Conread position: 256-441
Cow position:
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 143, 53

Conread position: 256-760
Cow position:
Alignm length: 530
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 458

Conread position: 256-808
Cow position:
Alignm length: 580
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 217

Conread position: 256-813
Cow position:
Alignm length: 585
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 256-813
Cow position:
Alignm length: 585
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 458

Conread position: 257-547
Cow position:
Alignm length: 298
Alignm identity: 195
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 45, 15

Conread position: 257-616
Cow position:
Alignm length: 379
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 310

Conread position: 257-804
Cow position:
Alignm length: 567
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 34

Conread position: 257-808
Cow position:
Alignm length: 569
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 185

Conread position: 257-813
Cow position:
Alignm length: 573
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 190

Conread position: 265-808
Cow position:
Alignm length: 571
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 17

Conread position: 266-813
Cow position:
Alignm length: 574
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 267-431
Cow position:
Alignm length: 173
Alignm identity: 125
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 267-624
Cow position:
Alignm length: 382
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 267-775
Cow position:
Alignm length: 534
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 267-808
Cow position:
Alignm length: 569
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 267-813
Cow position:
Alignm length: 571
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 274-628
Cow position:
Alignm length: 375
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 0

Conread position: 278-807
Cow position:
Alignm length: 555
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 81

Conread position: 286-786
Cow position:
Alignm length: 534
Alignm identity: 351
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 28, 231

Conread position: 305-813
Cow position:
Alignm length: 527
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 5

Conread position: 308-522
Cow position:
Alignm length: 218
Alignm identity: 162
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 125, 0

Conread position: 310-492
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 117, 129

Conread position: 310-521
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 133, 65

Conread position: 310-533
Cow position:
Alignm length: 228
Alignm identity: 177
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 124, 80

Conread position: 310-610
Cow position:
Alignm length: 316
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 183

Conread position: 310-616
Cow position:
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 16

Conread position: 310-650
Cow position:
Alignm length: 354
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 91

Conread position: 310-654
Cow position:
Alignm length: 350
Alignm identity: 221
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 173

Conread position: 310-696
Cow position:
Alignm length: 418
Alignm identity: 279
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 29

Conread position: 310-707
Cow position:
Alignm length: 414
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 48

Conread position: 310-787
Cow position:
Alignm length: 488
Alignm identity: 304
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 79, 86

Conread position: 310-805
Cow position:
Alignm length: 515
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 85

Conread position: 310-808
Cow position:
Alignm length: 518
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 337

Conread position: 310-808
Cow position:
Alignm length: 517
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 156

Conread position: 310-811
Cow position:
Alignm length: 517
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 73

Conread position: 310-813
Cow position:
Alignm length: 522
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 72

Conread position: 310-813
Cow position:
Alignm length: 524
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 403

Conread position: 310-813
Cow position:
Alignm length: 524
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 393

Conread position: 310-813
Cow position:
Alignm length: 525
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 208

Conread position: 310-813
Cow position:
Alignm length: 521
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 156

Conread position: 310-813
Cow position:
Alignm length: 520
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 310-813
Cow position:
Alignm length: 522
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 310-813
Cow position:
Alignm length: 520
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 154

Conread position: 311-762
Cow position:
Alignm length: 467
Alignm identity: 305
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 51, 88

Conread position: 311-778
Cow position:
Alignm length: 485
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 57

Conread position: 311-808
Cow position:
Alignm length: 517
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 89

Conread position: 312-813
Cow position:
Alignm length: 521
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 51

Conread position: 313-808
Cow position:
Alignm length: 517
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 90

Conread position: 314-813
Cow position:
Alignm length: 522
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 506

Conread position: 319-813
Cow position:
Alignm length: 518
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 48

Conread position: 322-608
Cow position:
Alignm length: 302
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 61

Conread position: 354-811
Cow position:
Alignm length: 482
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 53

Conread position: 356-738
Cow position:
Alignm length: 395
Alignm identity: 252
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 168, 53

Conread position: 358-813
Cow position:
Alignm length: 470
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 75

Conread position: 372-802
Cow position:
Alignm length: 445
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 27

Conread position: 376-813
Cow position:
Alignm length: 457
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 377-595
Cow position:
Alignm length: 231
Alignm identity: 163
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 51, 106

Conread position: 378-599
Cow position:
Alignm length: 231
Alignm identity: 162
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 58, 85

Conread position: 378-628
Cow position:
Alignm length: 263
Alignm identity: 176
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 10, 17

Conread position: 391-538
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 394-813
Cow position:
Alignm length: 437
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 404-704
Cow position:
Alignm length: 315
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 85

Conread position: 405-710
Cow position:
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 405-813
Cow position:
Alignm length: 425
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 231

Conread position: 414-813
Cow position:
Alignm length: 420
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 59

Conread position: 442-648
Cow position:
Alignm length: 221
Alignm identity: 167
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 58, 0

Conread position: 442-710
Cow position:
Alignm length: 272
Alignm identity: 194
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 83, 22

Conread position: 445-751
Cow position:
Alignm length: 332
Alignm identity: 234
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 80, 200

Conread position: 448-812
Cow position:
Alignm length: 382
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 223

Conread position: 474-813
Cow position:
Alignm length: 355
Alignm identity: 239
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 51, 228

Conread position: 477-813
Cow position:
Alignm length: 353
Alignm identity: 245
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 48, 0

Conread position: 485-758
Cow position:
Alignm length: 288
Alignm identity: 196
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 530-833
Cow position:
Alignm length: 315
Alignm identity: 221
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 28, 97

Conread position: 537-765
Cow position:
Alignm length: 237
Alignm identity: 168
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 20, 0

Conread position: 541-813
Cow position:
Alignm length: 280
Alignm identity: 199
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 43, 0

Conread position: 555-813
Cow position:
Alignm length: 270
Alignm identity: 192
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 29, 0

Conread position: 558-808
Cow position:
Alignm length: 257
Alignm identity: 191
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 26, 0

Conread position: 558-813
Cow position:
Alignm length: 261
Alignm identity: 192
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 26, 17

Conread position: 605-813
Cow position:
Alignm length: 213
Alignm identity: 146
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 35, 0

Conread position: 611-778
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 29, 0

Conread position: 611-813
Cow position:
Alignm length: 206
Alignm identity: 146
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 29, 126

Conread position: 612-802
Cow position:
Alignm length: 194
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 28, 0

Conread position: 619-813
Cow position:
Alignm length: 199
Alignm identity: 141
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 635-808
Cow position:
Alignm length: 178
Alignm identity: 128
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 5, 0

Conread position: 639-813
Cow position:
Alignm length: 176
Alignm identity: 124
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 641-813
Cow position:
Alignm length: 176
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 649-805
Cow position:
Alignm length: 160
Alignm identity: 117
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 19, 153

Show alignments to all cow chromosomes.