Cow genome map

Conread name: Utr1-UTR010022D12

Conread position: 91-341
Cow position:
Alignm length: 262
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 60, 134

Conread position: 96-242
Cow position:
Alignm length: 155
Alignm identity: 121
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 58, 0

Conread position: 96-243
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 51, 131

Conread position: 96-284
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 177

Conread position: 96-303
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 62, 32

Conread position: 96-323
Cow position:
Alignm length: 237
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 0

Conread position: 103-303
Cow position:
Alignm length: 213
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 166

Conread position: 110-305
Cow position:
Alignm length: 209
Alignm identity: 149
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 153

Conread position: 110-323
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 44, 21

Conread position: 118-313
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 40, 163

Conread position: 118-323
Cow position:
Alignm length: 211
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 62

Conread position: 128-352
Cow position:
Alignm length: 231
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 47, 31

Conread position: 230-808
Cow position:
Alignm length: 598
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 18

Conread position: 242-548
Cow position:
Alignm length: 321
Alignm identity: 233
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 27, 144

Conread position: 249-822
Cow position:
Alignm length: 597
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 112

Conread position: 250-813
Cow position:
Alignm length: 591
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 48

Conread position: 252-638
Cow position:
Alignm length: 407
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 27

Conread position: 252-702
Cow position:
Alignm length: 470
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 100

Conread position: 252-705
Cow position:
Alignm length: 479
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 9

Conread position: 252-718
Cow position:
Alignm length: 489
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-760
Cow position:
Alignm length: 534
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-760
Cow position:
Alignm length: 535
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-801
Cow position:
Alignm length: 583
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-802
Cow position:
Alignm length: 577
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-808
Cow position:
Alignm length: 585
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-808
Cow position:
Alignm length: 584
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 583
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 30

Conread position: 252-813
Cow position:
Alignm length: 584
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 30

Conread position: 252-813
Cow position:
Alignm length: 585
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 592
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 584
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 584
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 190

Conread position: 252-813
Cow position:
Alignm length: 590
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 31

Conread position: 252-813
Cow position:
Alignm length: 588
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 597
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 30

Conread position: 253-677
Cow position:
Alignm length: 443
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 272

Conread position: 254-413
Cow position:
Alignm length: 168
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 56, 0

Conread position: 254-532
Cow position:
Alignm length: 290
Alignm identity: 206
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 58, 0

Conread position: 254-608
Cow position:
Alignm length: 372
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 93

Conread position: 254-769
Cow position:
Alignm length: 545
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 142

Conread position: 254-772
Cow position:
Alignm length: 544
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-779
Cow position:
Alignm length: 548
Alignm identity: 358
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 271, 67

Conread position: 254-805
Cow position:
Alignm length: 575
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-808
Cow position:
Alignm length: 576
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 219

Conread position: 254-813
Cow position:
Alignm length: 591
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-813
Cow position:
Alignm length: 588
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-813
Cow position:
Alignm length: 587
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-813
Cow position:
Alignm length: 583
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 28

Conread position: 254-813
Cow position:
Alignm length: 579
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 107

Conread position: 254-813
Cow position:
Alignm length: 587
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 30

Conread position: 254-813
Cow position:
Alignm length: 584
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-813
Cow position:
Alignm length: 588
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 21

Conread position: 254-813
Cow position:
Alignm length: 587
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 0

Conread position: 254-813
Cow position:
Alignm length: 587
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-818
Cow position:
Alignm length: 593
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 255-503
Cow position:
Alignm length: 259
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 246

Conread position: 255-613
Cow position:
Alignm length: 370
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 258

Conread position: 255-630
Cow position:
Alignm length: 400
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 16

Conread position: 255-697
Cow position:
Alignm length: 481
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 29

Conread position: 255-802
Cow position:
Alignm length: 574
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 27

Conread position: 255-813
Cow position:
Alignm length: 573
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 40

Conread position: 255-813
Cow position:
Alignm length: 579
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 7

Conread position: 256-427
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 21, 0

Conread position: 256-651
Cow position:
Alignm length: 429
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 17

Conread position: 256-778
Cow position:
Alignm length: 533
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 449

Conread position: 256-807
Cow position:
Alignm length: 585
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 475

Conread position: 256-808
Cow position:
Alignm length: 578
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 388

Conread position: 256-813
Cow position:
Alignm length: 584
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 26

Conread position: 256-813
Cow position:
Alignm length: 585
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 21

Conread position: 257-498
Cow position:
Alignm length: 253
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 204

Conread position: 257-808
Cow position:
Alignm length: 576
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 137

Conread position: 266-813
Cow position:
Alignm length: 569
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 13

Conread position: 267-813
Cow position:
Alignm length: 571
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 46

Conread position: 274-813
Cow position:
Alignm length: 568
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 498

Conread position: 274-813
Cow position:
Alignm length: 569
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 103

Conread position: 279-807
Cow position:
Alignm length: 540
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 11

Conread position: 305-813
Cow position:
Alignm length: 528
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 5

Conread position: 308-813
Cow position:
Alignm length: 525
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 310-523
Cow position:
Alignm length: 217
Alignm identity: 161
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 123, 162

Conread position: 310-532
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 141, 57

Conread position: 310-533
Cow position:
Alignm length: 233
Alignm identity: 168
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 73, 58

Conread position: 310-578
Cow position:
Alignm length: 284
Alignm identity: 204
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 39, 105

Conread position: 310-760
Cow position:
Alignm length: 478
Alignm identity: 312
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 61, 334

Conread position: 310-801
Cow position:
Alignm length: 510
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 68

Conread position: 310-808
Cow position:
Alignm length: 517
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 506

Conread position: 310-808
Cow position:
Alignm length: 518
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 357

Conread position: 310-809
Cow position:
Alignm length: 531
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 37

Conread position: 310-813
Cow position:
Alignm length: 521
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 286

Conread position: 310-813
Cow position:
Alignm length: 518
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 310-813
Cow position:
Alignm length: 528
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 48

Conread position: 310-813
Cow position:
Alignm length: 524
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 310-813
Cow position:
Alignm length: 524
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 80

Conread position: 310-813
Cow position:
Alignm length: 518
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 0

Conread position: 311-519
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 115, 43

Conread position: 311-775
Cow position:
Alignm length: 480
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 82

Conread position: 311-793
Cow position:
Alignm length: 491
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 74

Conread position: 312-612
Cow position:
Alignm length: 320
Alignm identity: 228
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 65, 7

Conread position: 313-811
Cow position:
Alignm length: 542
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 0

Conread position: 315-490
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 6, 16

Conread position: 315-813
Cow position:
Alignm length: 518
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 26

Conread position: 316-813
Cow position:
Alignm length: 516
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 74

Conread position: 320-524
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 112, 85

Conread position: 320-544
Cow position:
Alignm length: 229
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 28

Conread position: 322-533
Cow position:
Alignm length: 216
Alignm identity: 161
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 115, 40

Conread position: 326-667
Cow position:
Alignm length: 355
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 171

Conread position: 377-802
Cow position:
Alignm length: 444
Alignm identity: 294
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 60, 335

Conread position: 396-813
Cow position:
Alignm length: 436
Alignm identity: 290
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 40, 287

Conread position: 404-813
Cow position:
Alignm length: 429
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 405-808
Cow position:
Alignm length: 423
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 430-808
Cow position:
Alignm length: 398
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 252

Conread position: 436-813
Cow position:
Alignm length: 386
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 90

Conread position: 442-802
Cow position:
Alignm length: 376
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 159

Conread position: 442-838
Cow position:
Alignm length: 413
Alignm identity: 276
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 90, 49

Conread position: 457-654
Cow position:
Alignm length: 210
Alignm identity: 154
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 59, 76

Conread position: 484-775
Cow position:
Alignm length: 306
Alignm identity: 215
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 41, 0

Conread position: 528-813
Cow position:
Alignm length: 297
Alignm identity: 205
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 29, 8

Conread position: 530-810
Cow position:
Alignm length: 288
Alignm identity: 202
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 16, 177

Conread position: 571-760
Cow position:
Alignm length: 193
Alignm identity: 131
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 589-813
Cow position:
Alignm length: 231
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 51, 0

Conread position: 600-817
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 13, 40

Conread position: 605-788
Cow position:
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 159

Show alignments to all cow chromosomes.