Cow genome map

Conread name: Utr1-UTR010022D12

Conread position: 92-285
Cow position:
Alignm length: 196
Alignm identity: 136
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 62, 96

Conread position: 96-242
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 96-242
Cow position:
Alignm length: 153
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 0

Conread position: 96-303
Cow position:
Alignm length: 221
Alignm identity: 158
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 62, 0

Conread position: 96-303
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 96-358
Cow position:
Alignm length: 272
Alignm identity: 183
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 135

Conread position: 103-354
Cow position:
Alignm length: 262
Alignm identity: 178
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 169

Conread position: 231-801
Cow position:
Alignm length: 595
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 21

Conread position: 250-459
Cow position:
Alignm length: 223
Alignm identity: 174
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 7, 56

Conread position: 250-804
Cow position:
Alignm length: 582
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 32

Conread position: 252-491
Cow position:
Alignm length: 252
Alignm identity: 176
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 14, 45

Conread position: 252-521
Cow position:
Alignm length: 279
Alignm identity: 204
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 62, 30

Conread position: 252-605
Cow position:
Alignm length: 367
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 19

Conread position: 252-615
Cow position:
Alignm length: 389
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 252-723
Cow position:
Alignm length: 498
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-760
Cow position:
Alignm length: 528
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 15

Conread position: 252-760
Cow position:
Alignm length: 533
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 30

Conread position: 252-790
Cow position:
Alignm length: 558
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 76

Conread position: 252-805
Cow position:
Alignm length: 582
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-807
Cow position:
Alignm length: 576
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-807
Cow position:
Alignm length: 588
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-808
Cow position:
Alignm length: 584
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-810
Cow position:
Alignm length: 582
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 50

Conread position: 252-812
Cow position:
Alignm length: 582
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 191

Conread position: 252-813
Cow position:
Alignm length: 580
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 30

Conread position: 252-813
Cow position:
Alignm length: 586
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 580
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 30

Conread position: 252-813
Cow position:
Alignm length: 598
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 25

Conread position: 252-813
Cow position:
Alignm length: 589
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 30

Conread position: 252-813
Cow position:
Alignm length: 590
Alignm identity: 435
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 30

Conread position: 252-815
Cow position:
Alignm length: 597
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 39

Conread position: 253-757
Cow position:
Alignm length: 533
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 14

Conread position: 253-813
Cow position:
Alignm length: 606
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 445

Conread position: 254-452
Cow position:
Alignm length: 210
Alignm identity: 149
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 254-533
Cow position:
Alignm length: 292
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-628
Cow position:
Alignm length: 398
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 0

Conread position: 254-696
Cow position:
Alignm length: 468
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 366

Conread position: 254-704
Cow position:
Alignm length: 467
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 57

Conread position: 254-746
Cow position:
Alignm length: 517
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 30

Conread position: 254-802
Cow position:
Alignm length: 569
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 41

Conread position: 254-808
Cow position:
Alignm length: 577
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 112

Conread position: 254-808
Cow position:
Alignm length: 580
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 28

Conread position: 254-808
Cow position:
Alignm length: 580
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 231

Conread position: 254-813
Cow position:
Alignm length: 587
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 455

Conread position: 254-813
Cow position:
Alignm length: 587
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 135

Conread position: 254-833
Cow position:
Alignm length: 605
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 139

Conread position: 255-533
Cow position:
Alignm length: 291
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 59, 27

Conread position: 255-646
Cow position:
Alignm length: 415
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 270

Conread position: 255-707
Cow position:
Alignm length: 477
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 160

Conread position: 255-707
Cow position:
Alignm length: 480
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 16

Conread position: 255-808
Cow position:
Alignm length: 589
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 255-813
Cow position:
Alignm length: 586
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 554

Conread position: 256-480
Cow position:
Alignm length: 236
Alignm identity: 173
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 47, 0

Conread position: 256-654
Cow position:
Alignm length: 423
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 256-689
Cow position:
Alignm length: 458
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 0

Conread position: 256-813
Cow position:
Alignm length: 580
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 26

Conread position: 256-813
Cow position:
Alignm length: 580
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 119

Conread position: 257-807
Cow position:
Alignm length: 586
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 25

Conread position: 257-808
Cow position:
Alignm length: 587
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 405

Conread position: 263-813
Cow position:
Alignm length: 578
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 13

Conread position: 264-533
Cow position:
Alignm length: 276
Alignm identity: 193
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 47

Conread position: 264-800
Cow position:
Alignm length: 563
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 49

Conread position: 264-813
Cow position:
Alignm length: 578
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 127

Conread position: 265-470
Cow position:
Alignm length: 219
Alignm identity: 160
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 49, 0

Conread position: 266-805
Cow position:
Alignm length: 560
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 13

Conread position: 267-514
Cow position:
Alignm length: 259
Alignm identity: 190
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 45, 234

Conread position: 267-813
Cow position:
Alignm length: 596
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 351

Conread position: 267-813
Cow position:
Alignm length: 574
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 429

Conread position: 270-619
Cow position:
Alignm length: 365
Alignm identity: 247
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 10, 126

Conread position: 274-488
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 86, 17

Conread position: 274-505
Cow position:
Alignm length: 243
Alignm identity: 180
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 0

Conread position: 277-638
Cow position:
Alignm length: 384
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 348

Conread position: 277-813
Cow position:
Alignm length: 559
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 329

Conread position: 279-649
Cow position:
Alignm length: 381
Alignm identity: 254
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 154, 31

Conread position: 299-800
Cow position:
Alignm length: 519
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 27

Conread position: 306-813
Cow position:
Alignm length: 523
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 13

Conread position: 308-813
Cow position:
Alignm length: 536
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 11

Conread position: 310-477
Cow position:
Alignm length: 171
Alignm identity: 134
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 123, 0

Conread position: 310-493
Cow position:
Alignm length: 187
Alignm identity: 130
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 310-623
Cow position:
Alignm length: 331
Alignm identity: 226
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 67, 44

Conread position: 310-635
Cow position:
Alignm length: 342
Alignm identity: 237
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 84, 67

Conread position: 310-648
Cow position:
Alignm length: 354
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 179

Conread position: 310-677
Cow position:
Alignm length: 383
Alignm identity: 247
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 54, 129

Conread position: 310-679
Cow position:
Alignm length: 392
Alignm identity: 254
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 67

Conread position: 310-699
Cow position:
Alignm length: 407
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 310-759
Cow position:
Alignm length: 468
Alignm identity: 315
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 123, 31

Conread position: 310-760
Cow position:
Alignm length: 470
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 0

Conread position: 310-802
Cow position:
Alignm length: 511
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 143

Conread position: 310-802
Cow position:
Alignm length: 510
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 172

Conread position: 310-808
Cow position:
Alignm length: 518
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 323

Conread position: 310-813
Cow position:
Alignm length: 523
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 46

Conread position: 310-813
Cow position:
Alignm length: 521
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 294

Conread position: 310-813
Cow position:
Alignm length: 521
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 33

Conread position: 310-813
Cow position:
Alignm length: 521
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 0

Conread position: 311-705
Cow position:
Alignm length: 412
Alignm identity: 264
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 116, 66

Conread position: 311-805
Cow position:
Alignm length: 514
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 142

Conread position: 312-754
Cow position:
Alignm length: 451
Alignm identity: 280
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 28, 80

Conread position: 315-813
Cow position:
Alignm length: 514
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 40

Conread position: 317-813
Cow position:
Alignm length: 518
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 38

Conread position: 334-629
Cow position:
Alignm length: 302
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 190

Conread position: 351-796
Cow position:
Alignm length: 457
Alignm identity: 286
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 33, 67

Conread position: 372-686
Cow position:
Alignm length: 326
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 14

Conread position: 373-813
Cow position:
Alignm length: 460
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 13

Conread position: 378-664
Cow position:
Alignm length: 309
Alignm identity: 214
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 88, 38

Conread position: 380-809
Cow position:
Alignm length: 444
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 134

Conread position: 383-809
Cow position:
Alignm length: 440
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 50

Conread position: 392-813
Cow position:
Alignm length: 447
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 111

Conread position: 394-813
Cow position:
Alignm length: 439
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 397-813
Cow position:
Alignm length: 437
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 442-689
Cow position:
Alignm length: 255
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 78, 52

Conread position: 442-813
Cow position:
Alignm length: 392
Alignm identity: 257
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 58, 15

Conread position: 455-813
Cow position:
Alignm length: 370
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 9

Conread position: 461-676
Cow position:
Alignm length: 230
Alignm identity: 161
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 64, 0

Conread position: 487-813
Cow position:
Alignm length: 337
Alignm identity: 229
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 38, 12

Conread position: 502-809
Cow position:
Alignm length: 319
Alignm identity: 214
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 9

Conread position: 505-813
Cow position:
Alignm length: 320
Alignm identity: 221
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 70

Conread position: 542-801
Cow position:
Alignm length: 266
Alignm identity: 182
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 42, 0

Conread position: 560-813
Cow position:
Alignm length: 259
Alignm identity: 192
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 24, 205

Conread position: 587-813
Cow position:
Alignm length: 231
Alignm identity: 168
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 53, 124

Conread position: 619-813
Cow position:
Alignm length: 199
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 172

Show alignments to all cow chromosomes.