Cow genome map

Conread name: Utr1-UTR010032B02

Conread position: 574-883
Cow position: chr11:40485790-40486105 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 210
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 53, 217

Conread position: 590-887
Cow position: chr11:11460624-11460317 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 37, 70

Conread position: 593-889
Cow position: chr11:66265723-66265423 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 216
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 34, 115

Conread position: 642-883
Cow position: chr11:9874384-9874150 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 642-889
Cow position: chr11:69402180-69402423 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 224, 190

Conread position: 643-849
Cow position: chr11:37372378-37372173 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 54, 97

Conread position: 643-881
Cow position: chr11:68423130-68422907 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 223, 26

Conread position: 644-850
Cow position: chr11:31576064-31575861 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 140
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 171, 51

Conread position: 644-856
Cow position: chr11:51745415-51745214 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 152
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 0

Conread position: 644-889
Cow position: chr11:45890025-45889781 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 178
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 176, 57

Conread position: 644-890
Cow position: chr11:11752450-11752695 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 24, 109

Conread position: 644-890
Cow position: chr11:27681567-27681324 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 172, 216

Conread position: 644-890
Cow position: chr11:47168951-47169182 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 215, 56

Conread position: 644-890
Cow position: chr11:56892883-56892644 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 222, 56

Conread position: 644-890
Cow position: chr11:67236466-67236234 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 182
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 35, 56

Conread position: 644-890
Cow position: chr11:67745387-67745148 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 223, 57

Conread position: 645-838
Cow position: chr11:21473056-21473243 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 645-889
Cow position: chr11:25331679-25331916 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 8, 58

Conread position: 649-879
Cow position: chr11:4609780-4609999 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 217, 51

Conread position: 649-885
Cow position: chr11:32438890-32439123 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 165
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 217, 132

Conread position: 649-887
Cow position: chr11:8828571-8828801 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 217, 51

Conread position: 649-888
Cow position: chr11:12949886-12950121 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 174
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 217, 51

Conread position: 649-888
Cow position: chr11:17963907-17964125 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 168
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 649-889
Cow position: chr11:42519795-42519565 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 177
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 217, 42

Conread position: 649-890
Cow position: chr11:2908826-2908594 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 649-890
Cow position: chr11:28691693-28691932 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 174
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 49, 192

Conread position: 649-890
Cow position: chr11:47565876-47566126 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 53, 90

Conread position: 649-890
Cow position: chr11:50951618-50951377 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 179
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 217, 196

Conread position: 649-890
Cow position: chr11:55821650-55821883 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 214, 34

Conread position: 649-890
Cow position: chr11:78543994-78543758 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 25, 45

Conread position: 650-868
Cow position: chr11:26468207-26467992 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 37, 0

Conread position: 652-890
Cow position: chr11:53452291-53452525 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 170
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 214, 48

Conread position: 663-890
Cow position: chr11:65988270-65988052 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 152, 13

Conread position: 665-864
Cow position: chr11:65444798-65444996 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 177, 0

Conread position: 665-889
Cow position: chr11:46413618-46413400 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 92, 103

Conread position: 665-890
Cow position: chr11:877146-876923 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 173
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 53, 26

Conread position: 665-890
Cow position: chr11:63156873-63157086 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 168
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 164, 71

Conread position: 666-888
Cow position: chr11:16000969-16000752 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 200, 35

Conread position: 666-890
Cow position: chr11:39809033-39808815 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 193, 26

Conread position: 671-889
Cow position: chr11:48650829-48650620 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 188, 29

Conread position: 675-886
Cow position: chr11:20491604-20491398 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 191, 40

Conread position: 679-890
Cow position: chr11:38845231-38845433 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 182, 65

Conread position: 694-883
Cow position: chr11:31894292-31894107 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 172, 49

Conread position: 703-890
Cow position: chr11:7333713-7333899 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 163, 58

Conread position: 703-890
Cow position: chr11:19238149-19238333 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 10, 0

Conread position: 703-890
Cow position: chr11:30952506-30952691 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 74, 55

Conread position: 703-890
Cow position: chr11:59366069-59366251 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 173, 142

Conread position: 704-887
Cow position: chr11:52935908-52936080 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 708-889
Cow position: chr11:83588033-83587864 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 711-890
Cow position: chr11:35668712-35668892 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 104, 141

Conread position: 712-890
Cow position: chr11:40396320-40396148 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 713-890
Cow position: chr11:42232605-42232431 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 139, 0

Conread position: 725-890
Cow position: chr11:8232582-8232745 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 137, 68

Conread position: 731-890
Cow position: chr11:46399105-46398949 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 138, 27

Conread position: 740-890
Cow position: chr11:48011990-48012132 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 21

Show alignments to all cow chromosomes.