Cow genome map
| Conread name: | Utr1-UTR010032B02 |
| Conread position: | 637-887 |
| Cow position: | chr17:3042607-3042358 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 20, 25 |
| Conread position: | 642-890 |
| Cow position: | chr17:8279581-8279827 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 224, 86 |
| Conread position: | 644-889 |
| Cow position: | chr17:26085149-26084917 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 84, 48 |
| Conread position: | 644-890 |
| Cow position: | chr17:10271615-10271377 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 223, 45 |
| Conread position: | 644-890 |
| Cow position: | chr17:37138885-37138643 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 201, 63 |
| Conread position: | 644-890 |
| Cow position: | chr17:39012843-39012604 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 194, 52 |
| Conread position: | 645-890 |
| Cow position: | chr17:20216291-20216051 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 7, 43 |
| Conread position: | 649-877 |
| Cow position: | chr17:6570021-6570243 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 217, 51 |
| Conread position: | 649-888 |
| Cow position: | chr17:19891744-19891503 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 21, 147 |
| Conread position: | 649-889 |
| Cow position: | chr17:25741065-25740835 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 90, 47 |
| Conread position: | 649-890 |
| Cow position: | chr17:11171912-11171681 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 57, 48 |
| Conread position: | 649-890 |
| Cow position: | chr17:28359961-28359727 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 217, 82 |
| Conread position: | 649-890 |
| Cow position: | chr17:32457450-32457697 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 179, 51 |
| Conread position: | 650-889 |
| Cow position: | chr17:18824905-18824673 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 169, 48 |
| Conread position: | 651-890 |
| Cow position: | chr17:144063-144291 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 663-864 |
| Cow position: | chr17:5787732-5787924 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 665-890 |
| Cow position: | chr17:37414798-37415014 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 198, 31 |
| Conread position: | 674-860 |
| Cow position: | chr17:27257133-27257318 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 86, 172 |
| Conread position: | 695-862 |
| Cow position: | chr17:25590161-25590323 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 703-883 |
| Cow position: | chr17:10424147-10423972 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 163, 98 |
| Conread position: | 703-889 |
| Cow position: | chr17:18246146-18245960 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 156, 141 |
| Conread position: | 703-890 |
| Cow position: | chr17:3466893-3466714 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 163, 36 |
| Conread position: | 703-890 |
| Cow position: | chr17:26162358-26162544 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 58, 17 |
| Conread position: | 703-890 |
| Cow position: | chr17:33998986-33999162 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 160, 45 |
| Conread position: | 703-890 |
| Cow position: | chr17:35212435-35212248 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 106, 140 |
| Conread position: | 709-890 |
| Cow position: | chr17:7614320-7614496 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 157, 103 |
| Conread position: | 739-890 |
| Cow position: | chr17:25755824-25755670 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 74, 22 |
| Conread position: | 740-864 |
| Cow position: | chr17:20608577-20608453 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 753-884 |
| Cow position: | chr17:25340132-25340266 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 56, 66 |
| Conread position: | 761-890 |
| Cow position: | chr17:1094505-1094634 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 12, 62 |
Show alignments to all cow chromosomes.