Cow genome map
| Conread name: | Utr1-UTR010032B02 |
| Conread position: | 576-890 |
| Cow position: | chr2:2382408-2382717 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 28 |
| Conread position: | 625-866 |
| Cow position: | chr2:1918196-1918431 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 639-807 |
| Cow position: | chr2:73386755-73386924 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 641-870 |
| Cow position: | chr2:62309342-62309566 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 225, 59 |
| Conread position: | 642-813 |
| Cow position: | chr2:20250796-20250626 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 642-890 |
| Cow position: | chr2:1651489-1651249 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 170, 27 |
| Conread position: | 643-885 |
| Cow position: | chr2:7720828-7721059 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 223, 39 |
| Conread position: | 643-890 |
| Cow position: | chr2:4071007-4070760 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 86, 16 |
| Conread position: | 643-890 |
| Cow position: | chr2:33659616-33659860 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 117 |
| Conread position: | 643-890 |
| Cow position: | chr2:56269529-56269780 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 195, 132 |
| Conread position: | 644-877 |
| Cow position: | chr2:70579619-70579853 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 175, 167 |
| Conread position: | 644-885 |
| Cow position: | chr2:70664102-70663862 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 26, 202 |
| Conread position: | 644-889 |
| Cow position: | chr2:41313978-41313735 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 222, 86 |
| Conread position: | 644-890 |
| Cow position: | chr2:793730-793491 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 214, 11 |
| Conread position: | 644-890 |
| Cow position: | chr2:2740545-2740307 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 219, 17 |
| Conread position: | 644-890 |
| Cow position: | chr2:6444111-6443869 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 171, 56 |
| Conread position: | 644-890 |
| Cow position: | chr2:14099733-14099489 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 143, 57 |
| Conread position: | 644-890 |
| Cow position: | chr2:26042155-26042399 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 26, 107 |
| Conread position: | 644-890 |
| Cow position: | chr2:40313449-40313216 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 98, 25 |
| Conread position: | 644-890 |
| Cow position: | chr2:42309471-42309712 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 218, 47 |
| Conread position: | 644-890 |
| Cow position: | chr2:66779779-66780014 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 78, 48 |
| Conread position: | 644-890 |
| Cow position: | chr2:70752880-70752638 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 222, 57 |
| Conread position: | 645-890 |
| Cow position: | chr2:10356590-10356832 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 221, 44 |
| Conread position: | 645-890 |
| Cow position: | chr2:82311115-82311361 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 214, 86 |
| Conread position: | 646-890 |
| Cow position: | chr2:45726263-45726030 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 169, 54 |
| Conread position: | 646-890 |
| Cow position: | chr2:62818623-62818871 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 649-887 |
| Cow position: | chr2:58685461-58685223 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 166, 43 |
| Conread position: | 649-888 |
| Cow position: | chr2:61950592-61950367 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 210, 44 |
| Conread position: | 649-890 |
| Cow position: | chr2:6056048-6055813 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 153 |
| Conread position: | 649-890 |
| Cow position: | chr2:29382600-29382832 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 649-890 |
| Cow position: | chr2:50606618-50606388 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 166, 51 |
| Conread position: | 649-890 |
| Cow position: | chr2:53000588-53000353 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 136, 26 |
| Conread position: | 649-890 |
| Cow position: | chr2:70790674-70790908 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 15, 50 |
| Conread position: | 650-890 |
| Cow position: | chr2:49480516-49480748 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 177, 20 |
| Conread position: | 660-888 |
| Cow position: | chr2:34256231-34256452 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 206, 40 |
| Conread position: | 660-890 |
| Cow position: | chr2:76822189-76822408 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 198, 36 |
| Conread position: | 665-890 |
| Cow position: | chr2:18061565-18061784 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 86, 77 |
| Conread position: | 665-890 |
| Cow position: | chr2:39855855-39855629 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 150, 181 |
| Conread position: | 665-890 |
| Cow position: | chr2:61820727-61820944 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 201, 28 |
| Conread position: | 670-872 |
| Cow position: | chr2:59380428-59380624 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 196, 30 |
| Conread position: | 674-888 |
| Cow position: | chr2:14749648-14749439 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 192, 136 |
| Conread position: | 674-888 |
| Cow position: | chr2:46175206-46175411 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 24, 32 |
| Conread position: | 674-890 |
| Cow position: | chr2:80595260-80595471 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 192, 26 |
| Conread position: | 675-890 |
| Cow position: | chr2:22859586-22859799 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 81, 101 |
| Conread position: | 684-890 |
| Cow position: | chr2:9325043-9324838 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 53, 62 |
| Conread position: | 696-890 |
| Cow position: | chr2:60182275-60182467 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 44, 67 |
| Conread position: | 703-881 |
| Cow position: | chr2:80800734-80800561 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 29, 97 |
| Conread position: | 703-890 |
| Cow position: | chr2:43773549-43773735 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 163, 37 |
| Conread position: | 703-890 |
| Cow position: | chr2:63865300-63865486 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 163, 58 |
| Conread position: | 703-890 |
| Cow position: | chr2:68842914-68843100 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 157, 72 |
| Conread position: | 707-885 |
| Cow position: | chr2:17427159-17426982 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 107, 54 |
| Conread position: | 707-890 |
| Cow position: | chr2:31457510-31457332 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 723-890 |
| Cow position: | chr2:50400432-50400267 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 143, 38 |
| Conread position: | 726-890 |
| Cow position: | chr2:73069729-73069564 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 90, 35 |
| Conread position: | 737-889 |
| Cow position: | chr2:19154300-19154147 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 75, 30 |
| Conread position: | 740-890 |
| Cow position: | chr2:18889393-18889543 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 126, 111 |
| Conread position: | 741-887 |
| Cow position: | chr2:66796897-66797047 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 55, 20 |
| Conread position: | 752-890 |
| Cow position: | chr2:27613041-27613180 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 26, 94 |
| Conread position: | 754-890 |
| Cow position: | chr2:57293298-57293432 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 67 |
Show alignments to all cow chromosomes.