Cow genome map
| Conread name: | Utr1-UTR010032B02 |
| Conread position: | 571-890 |
| Cow position: | chr4:9548132-9547810 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 57, 12 |
| Conread position: | 577-888 |
| Cow position: | chr4:22249304-22249610 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 35, 10 |
| Conread position: | 579-890 |
| Cow position: | chr4:33030682-33030386 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 279, 45 |
| Conread position: | 593-889 |
| Cow position: | chr4:9846047-9845752 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 210 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 15, 42 |
| Conread position: | 642-890 |
| Cow position: | chr4:19307335-19307093 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 43 |
| Conread position: | 642-890 |
| Cow position: | chr4:21365484-21365239 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 19, 50 |
| Conread position: | 643-890 |
| Cow position: | chr4:10837305-10837546 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 114, 40 |
| Conread position: | 644-831 |
| Cow position: | chr4:40433826-40434012 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 644-855 |
| Cow position: | chr4:5580634-5580428 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 644-858 |
| Cow position: | chr4:30562-30771 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 149 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 165, 48 |
| Conread position: | 644-888 |
| Cow position: | chr4:40623025-40623260 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 155, 56 |
| Conread position: | 644-889 |
| Cow position: | chr4:18439493-18439734 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 220, 52 |
| Conread position: | 644-889 |
| Cow position: | chr4:21073076-21073318 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 222, 106 |
| Conread position: | 644-889 |
| Cow position: | chr4:31172748-31172509 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 223, 25 |
| Conread position: | 644-890 |
| Cow position: | chr4:5798042-5797806 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 222, 140 |
| Conread position: | 644-890 |
| Cow position: | chr4:10992125-10992365 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 222, 56 |
| Conread position: | 644-890 |
| Cow position: | chr4:22528311-22528554 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 148, 56 |
| Conread position: | 644-890 |
| Cow position: | chr4:23758879-23758638 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 222, 56 |
| Conread position: | 644-890 |
| Cow position: | chr4:50769689-50769932 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 42, 120 |
| Conread position: | 644-890 |
| Cow position: | chr4:54146391-54146641 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 192, 40 |
| Conread position: | 645-890 |
| Cow position: | chr4:39767425-39767183 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 221, 55 |
| Conread position: | 647-890 |
| Cow position: | chr4:65841692-65841928 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 52 |
| Conread position: | 649-833 |
| Cow position: | chr4:48283210-48283391 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 120, 43 |
| Conread position: | 649-890 |
| Cow position: | chr4:22115676-22115440 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 214, 52 |
| Conread position: | 649-890 |
| Cow position: | chr4:65406298-65406524 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 217, 52 |
| Conread position: | 650-890 |
| Cow position: | chr4:45919104-45918870 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 216, 50 |
| Conread position: | 660-889 |
| Cow position: | chr4:36813438-36813207 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 96, 138 |
| Conread position: | 665-840 |
| Cow position: | chr4:21249977-21250144 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 665-890 |
| Cow position: | chr4:21259269-21259050 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 198, 31 |
| Conread position: | 665-890 |
| Cow position: | chr4:35870260-35870047 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 147, 0 |
| Conread position: | 666-890 |
| Cow position: | chr4:6208515-6208300 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 200, 145 |
| Conread position: | 667-883 |
| Cow position: | chr4:25972953-25972738 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 669-888 |
| Cow position: | chr4:51123110-51122892 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 89, 125 |
| Conread position: | 670-870 |
| Cow position: | chr4:37880985-37880786 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 192, 175 |
| Conread position: | 670-890 |
| Cow position: | chr4:41154694-41154478 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 194, 21 |
| Conread position: | 674-888 |
| Cow position: | chr4:37827803-37828007 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 674-890 |
| Cow position: | chr4:49001251-49001463 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 148, 17 |
| Conread position: | 694-889 |
| Cow position: | chr4:27561423-27561231 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 30 |
| Conread position: | 700-890 |
| Cow position: | chr4:23166928-23166738 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 166, 111 |
| Conread position: | 701-890 |
| Cow position: | chr4:38181702-38181516 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 5, 112 |
| Conread position: | 703-888 |
| Cow position: | chr4:63784103-63784286 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 160, 54 |
| Conread position: | 703-890 |
| Cow position: | chr4:44676212-44676030 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 86, 111 |
| Conread position: | 716-889 |
| Cow position: | chr4:63417918-63418089 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 724-870 |
| Cow position: | chr4:45116061-45116207 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 142, 88 |
| Conread position: | 741-890 |
| Cow position: | chr4:46082910-46083055 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 125, 44 |
| Conread position: | 749-890 |
| Cow position: | chr4:26541711-26541572 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 117, 14 |
| Conread position: | 753-890 |
| Cow position: | chr4:5553817-5553955 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 48, 93 |
| Conread position: | 760-890 |
| Cow position: | chr4:24415249-24415123 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 34 |
Show alignments to all cow chromosomes.