Cow genome map

Conread name: Utr1-UTR010032B02

Conread position: 575-841
Cow position: chr6:59633344-59633063 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 193
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 52, 19

Conread position: 641-889
Cow position: chr6:18582686-18582928 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 178
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 174, 51

Conread position: 642-870
Cow position: chr6:4164045-4164268 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 173, 58

Conread position: 642-890
Cow position: chr6:7173624-7173872 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 165
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 220, 203

Conread position: 644-888
Cow position: chr6:57118818-57119056 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 219, 105

Conread position: 644-890
Cow position: chr6:6943557-6943796 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 171, 40

Conread position: 644-890
Cow position: chr6:9026643-9026398 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 141, 56

Conread position: 644-890
Cow position: chr6:24223035-24223279 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 219, 48

Conread position: 644-890
Cow position: chr6:36194722-36194472 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 175
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 36, 15

Conread position: 644-890
Cow position: chr6:47204599-47204356 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 169, 57

Conread position: 644-890
Cow position: chr6:54144426-54144186 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 169
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 222, 56

Conread position: 645-883
Cow position: chr6:47326949-47327178 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 8, 56

Conread position: 645-887
Cow position: chr6:6367548-6367784 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 9, 48

Conread position: 645-890
Cow position: chr6:35415393-35415641 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 180
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 216, 200

Conread position: 645-890
Cow position: chr6:37739300-37739067 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 175
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 48

Conread position: 645-890
Cow position: chr6:53673987-53673744 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 202

Conread position: 646-890
Cow position: chr6:55892889-55892647 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 201, 98

Conread position: 648-863
Cow position: chr6:59588287-59588497 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 7, 44

Conread position: 649-874
Cow position: chr6:24545732-24545511 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 149
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 189, 0

Conread position: 649-874
Cow position: chr6:61217911-61218133 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 151, 43

Conread position: 649-890
Cow position: chr6:16634108-16634337 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 217, 43

Conread position: 649-890
Cow position: chr6:19427569-19427334 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 212, 54

Conread position: 649-890
Cow position: chr6:24622855-24623092 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 169
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 210, 100

Conread position: 649-890
Cow position: chr6:51840397-51840151 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 162, 192

Conread position: 650-890
Cow position: chr6:50317927-50318175 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 179
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 137, 48

Conread position: 651-888
Cow position: chr6:36652539-36652302 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 162

Conread position: 662-889
Cow position: chr6:18048919-18049148 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 111, 87

Conread position: 665-890
Cow position: chr6:6731362-6731148 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 197, 41

Conread position: 665-890
Cow position: chr6:48572778-48572998 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 192, 167

Conread position: 665-890
Cow position: chr6:55475357-55475127 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 145, 94

Conread position: 665-890
Cow position: chr6:58074150-58073929 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 196, 44

Conread position: 666-890
Cow position: chr6:63197062-63197287 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 182, 84

Conread position: 670-890
Cow position: chr6:52556383-52556593 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 196, 82

Conread position: 675-889
Cow position: chr6:17534421-17534636 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 148
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 133, 100

Conread position: 677-863
Cow position: chr6:35774893-35775074 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 62, 77

Conread position: 680-886
Cow position: chr6:6994864-6995065 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 162, 0

Conread position: 684-889
Cow position: chr6:56376265-56376470 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 157
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 182, 161

Conread position: 686-890
Cow position: chr6:33985060-33984848 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 126, 166

Conread position: 696-890
Cow position: chr6:54807297-54807108 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 170, 5

Conread position: 703-887
Cow position: chr6:7824830-7824648 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 160, 130

Conread position: 703-888
Cow position: chr6:58316113-58315929 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 703-889
Cow position: chr6:3545759-3545577 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 115

Conread position: 703-889
Cow position: chr6:8318096-8318282 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 34, 44

Conread position: 703-889
Cow position: chr6:12387263-12387442 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 106, 46

Conread position: 703-889
Cow position: chr6:44371881-44372061 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 37, 0

Conread position: 703-890
Cow position: chr6:22969147-22968962 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 146
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 163, 61

Conread position: 703-890
Cow position: chr6:38453706-38453901 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 136, 98

Conread position: 706-890
Cow position: chr6:48344393-48344213 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 132
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 158, 14

Conread position: 709-890
Cow position: chr6:30474381-30474208 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 154, 53

Conread position: 713-890
Cow position: chr6:28164855-28164679 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 103, 54

Conread position: 714-888
Cow position: chr6:44511299-44511126 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 154, 50

Conread position: 714-890
Cow position: chr6:47624908-47625082 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 152, 47

Conread position: 729-889
Cow position: chr6:48806955-48807114 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 134, 29

Conread position: 735-889
Cow position: chr6:17669329-17669177 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 8, 16

Conread position: 737-887
Cow position: chr6:60153068-60152920 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 129, 21

Show alignments to all cow chromosomes.