Cow genome map
| Conread name: | Utr1-UTR010032B02 |
| Conread position: | 579-882 |
| Cow position: | chr7:48289560-48289255 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 59, 7 |
| Conread position: | 583-889 |
| Cow position: | chr7:26665351-26665670 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 40, 28 |
| Conread position: | 626-890 |
| Cow position: | chr7:3283507-3283247 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 77 |
| Conread position: | 637-890 |
| Cow position: | chr7:43941451-43941212 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 58 |
| Conread position: | 641-890 |
| Cow position: | chr7:3322924-3322681 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 9, 59 |
| Conread position: | 644-883 |
| Cow position: | chr7:46327642-46327875 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 222, 57 |
| Conread position: | 644-883 |
| Cow position: | chr7:55076575-55076810 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 106, 17 |
| Conread position: | 644-886 |
| Cow position: | chr7:23131723-23131488 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 216, 49 |
| Conread position: | 644-888 |
| Cow position: | chr7:19880920-19881160 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 219, 56 |
| Conread position: | 644-889 |
| Cow position: | chr7:22153285-22153037 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 21, 58 |
| Conread position: | 644-889 |
| Cow position: | chr7:37364915-37364680 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 217, 56 |
| Conread position: | 644-890 |
| Cow position: | chr7:5249788-5250031 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 170, 57 |
| Conread position: | 644-890 |
| Cow position: | chr7:7507676-7507440 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 218, 48 |
| Conread position: | 644-890 |
| Cow position: | chr7:19399551-19399793 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 105, 119 |
| Conread position: | 644-890 |
| Cow position: | chr7:53743775-53744016 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 152, 56 |
| Conread position: | 649-887 |
| Cow position: | chr7:45956050-45955816 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 111 |
| Conread position: | 649-890 |
| Cow position: | chr7:10942743-10942968 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 166, 43 |
| Conread position: | 649-890 |
| Cow position: | chr7:21197260-21197495 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 214, 74 |
| Conread position: | 649-890 |
| Cow position: | chr7:43234324-43234557 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 217, 100 |
| Conread position: | 649-890 |
| Cow position: | chr7:58490202-58489962 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 88, 50 |
| Conread position: | 650-889 |
| Cow position: | chr7:43215629-43215397 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 216, 39 |
| Conread position: | 651-890 |
| Cow position: | chr7:62102712-62102479 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 212, 49 |
| Conread position: | 660-847 |
| Cow position: | chr7:41913589-41913767 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 660-888 |
| Cow position: | chr7:61308210-61307994 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 660-890 |
| Cow position: | chr7:8826924-8826704 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 660-890 |
| Cow position: | chr7:25703115-25703339 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 665-887 |
| Cow position: | chr7:20147236-20147453 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 112, 84 |
| Conread position: | 665-889 |
| Cow position: | chr7:45709099-45709320 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 96, 33 |
| Conread position: | 665-889 |
| Cow position: | chr7:57537419-57537636 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 113, 89 |
| Conread position: | 667-890 |
| Cow position: | chr7:26466846-26466638 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 669-875 |
| Cow position: | chr7:48547761-48547964 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 669-890 |
| Cow position: | chr7:25445497-25445279 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 193, 85 |
| Conread position: | 669-890 |
| Cow position: | chr7:40758137-40758359 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 184, 20 |
| Conread position: | 670-890 |
| Cow position: | chr7:40727289-40727076 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 197, 22 |
| Conread position: | 675-890 |
| Cow position: | chr7:27387881-27388095 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 124, 177 |
| Conread position: | 680-883 |
| Cow position: | chr7:45747756-45747951 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 16, 24 |
| Conread position: | 703-832 |
| Cow position: | chr7:34441116-34441245 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 98 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 703-883 |
| Cow position: | chr7:48443698-48443871 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 64 |
| Conread position: | 703-887 |
| Cow position: | chr7:24767163-24767345 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 163, 56 |
| Conread position: | 703-890 |
| Cow position: | chr7:3134369-3134560 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 104, 139 |
| Conread position: | 703-890 |
| Cow position: | chr7:10099292-10099472 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 116, 108 |
| Conread position: | 703-890 |
| Cow position: | chr7:12755085-12755261 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 163, 63 |
| Conread position: | 703-890 |
| Cow position: | chr7:17406278-17406464 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 112, 143 |
| Conread position: | 703-890 |
| Cow position: | chr7:19051254-19051435 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 703-890 |
| Cow position: | chr7:36746396-36746206 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 84, 27 |
| Conread position: | 703-890 |
| Cow position: | chr7:47172640-47172822 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 160, 37 |
| Conread position: | 707-890 |
| Cow position: | chr7:23177601-23177418 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 159, 138 |
| Conread position: | 712-890 |
| Cow position: | chr7:3311901-3311727 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 154, 32 |
| Conread position: | 717-890 |
| Cow position: | chr7:53242536-53242362 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 103 |
| Conread position: | 734-889 |
| Cow position: | chr7:39497972-39498126 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 92, 9 |
| Conread position: | 737-890 |
| Cow position: | chr7:51248835-51248988 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 78, 8 |
| Conread position: | 741-890 |
| Cow position: | chr7:40213385-40213237 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 121, 20 |
| Conread position: | 742-889 |
| Cow position: | chr7:2744515-2744662 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 124, 103 |
| Conread position: | 743-890 |
| Cow position: | chr7:34199358-34199213 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 25 |
Show alignments to all cow chromosomes.