Cow genome map
| Conread name: | Utr1-UTR010032B02 |
| Conread position: | 561-890 |
| Cow position: | chr9:64454268-64453936 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 267 |
| Conread position: | 599-890 |
| Cow position: | chr9:14184564-14184859 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 203 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 16, 95 |
| Conread position: | 601-890 |
| Cow position: | chr9:11102929-11102627 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 26, 235 |
| Conread position: | 628-890 |
| Cow position: | chr9:23527865-23527608 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 25, 81 |
| Conread position: | 642-887 |
| Cow position: | chr9:41957747-41957988 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 9, 53 |
| Conread position: | 642-890 |
| Cow position: | chr9:39152739-39152494 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 19, 61 |
| Conread position: | 643-887 |
| Cow position: | chr9:54924564-54924807 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 223, 18 |
| Conread position: | 644-843 |
| Cow position: | chr9:34725567-34725369 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 185, 34 |
| Conread position: | 644-856 |
| Cow position: | chr9:34204075-34204282 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 644-890 |
| Cow position: | chr9:9200778-9200537 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 222, 117 |
| Conread position: | 644-890 |
| Cow position: | chr9:11201535-11201773 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 195, 0 |
| Conread position: | 644-890 |
| Cow position: | chr9:15006804-15006567 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 128, 56 |
| Conread position: | 644-890 |
| Cow position: | chr9:32847835-32848079 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 140, 56 |
| Conread position: | 644-890 |
| Cow position: | chr9:34309974-34310218 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 168, 48 |
| Conread position: | 644-890 |
| Cow position: | chr9:39428854-39428612 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 219, 191 |
| Conread position: | 644-890 |
| Cow position: | chr9:48133679-48133917 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 219, 56 |
| Conread position: | 644-890 |
| Cow position: | chr9:52633545-52633307 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 222, 47 |
| Conread position: | 645-890 |
| Cow position: | chr9:11363842-11364079 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 221, 53 |
| Conread position: | 645-890 |
| Cow position: | chr9:56252846-56253085 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 8, 57 |
| Conread position: | 645-890 |
| Cow position: | chr9:58669327-58669565 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 8, 57 |
| Conread position: | 649-840 |
| Cow position: | chr9:5172282-5172470 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 115, 40 |
| Conread position: | 649-864 |
| Cow position: | chr9:4858485-4858702 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 21, 101 |
| Conread position: | 649-882 |
| Cow position: | chr9:27292328-27292103 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 109, 79 |
| Conread position: | 649-890 |
| Cow position: | chr9:21462915-21462662 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 163, 52 |
| Conread position: | 649-890 |
| Cow position: | chr9:23943230-23943481 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 650-890 |
| Cow position: | chr9:54437214-54437449 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 23, 92 |
| Conread position: | 660-890 |
| Cow position: | chr9:214499-214280 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 206, 90 |
| Conread position: | 662-890 |
| Cow position: | chr9:17799589-17799815 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 11, 149 |
| Conread position: | 663-889 |
| Cow position: | chr9:29808419-29808649 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 149, 40 |
| Conread position: | 665-880 |
| Cow position: | chr9:2114040-2113830 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 17, 26 |
| Conread position: | 665-887 |
| Cow position: | chr9:32624974-32625189 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 198, 85 |
| Conread position: | 665-889 |
| Cow position: | chr9:52787572-52787350 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 17, 36 |
| Conread position: | 665-890 |
| Cow position: | chr9:19382297-19382512 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 201, 35 |
| Conread position: | 665-890 |
| Cow position: | chr9:32817175-32816946 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 148, 182 |
| Conread position: | 665-890 |
| Cow position: | chr9:38546382-38546602 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 201, 33 |
| Conread position: | 665-890 |
| Cow position: | chr9:44108867-44108643 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 87, 148 |
| Conread position: | 666-870 |
| Cow position: | chr9:20896864-20897069 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 93, 127 |
| Conread position: | 666-889 |
| Cow position: | chr9:18110898-18110678 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 147, 34 |
| Conread position: | 666-890 |
| Cow position: | chr9:10127700-10127484 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 200, 19 |
| Conread position: | 667-890 |
| Cow position: | chr9:3931928-3932151 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 23, 92 |
| Conread position: | 667-890 |
| Cow position: | chr9:56860979-56861202 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 129, 33 |
| Conread position: | 675-889 |
| Cow position: | chr9:5575297-5575506 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 188, 71 |
| Conread position: | 675-890 |
| Cow position: | chr9:4861361-4861576 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 103, 92 |
| Conread position: | 675-890 |
| Cow position: | chr9:9315284-9315491 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 179, 14 |
| Conread position: | 676-890 |
| Cow position: | chr9:42901023-42901232 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 138 |
| Conread position: | 679-889 |
| Cow position: | chr9:8950885-8951092 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 192, 85 |
| Conread position: | 692-890 |
| Cow position: | chr9:3725070-3724873 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 123, 67 |
| Conread position: | 700-890 |
| Cow position: | chr9:33038461-33038274 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 44, 12 |
| Conread position: | 703-890 |
| Cow position: | chr9:24399680-24399498 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 163, 108 |
| Conread position: | 703-890 |
| Cow position: | chr9:29108541-29108726 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 707-890 |
| Cow position: | chr9:27052332-27052149 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 19, 7 |
| Conread position: | 710-887 |
| Cow position: | chr9:31588091-31587914 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 156, 135 |
| Conread position: | 710-889 |
| Cow position: | chr9:34106735-34106909 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 156, 32 |
| Conread position: | 713-890 |
| Cow position: | chr9:34093426-34093241 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 44, 16 |
| Conread position: | 731-890 |
| Cow position: | chr9:8600359-8600522 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 49, 30 |
| Conread position: | 743-889 |
| Cow position: | chr9:18093625-18093476 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 72, 21 |
| Conread position: | 755-890 |
| Cow position: | chr9:17806050-17806184 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.