Cow genome map

Conread name: Utr1-UTR010044B01

Conread position: 1-225
Cow position: chr11:13088085-13088317 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 98, 0

Conread position: 1-225
Cow position: chr11:25098742-25098510 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 98, 0

Conread position: 1-225
Cow position: chr11:38600510-38600278 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 179
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 98, 0

Conread position: 1-225
Cow position: chr11:41192286-41192054 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 98, 0

Conread position: 1-225
Cow position: chr11:52421896-52422128 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 176
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 98, 0

Conread position: 1-267
Cow position: chr11:28666962-28667232 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 158

Conread position: 1-271
Cow position: chr11:23882462-23882738 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 239

Conread position: 1-281
Cow position: chr11:9154760-9154478 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 224

Conread position: 1-289
Cow position: chr11:31531577-31531858 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 160

Conread position: 1-291
Cow position: chr11:14260620-14260327 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 134

Conread position: 1-304
Cow position: chr11:30254658-30254955 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 230
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 98, 230

Conread position: 1-307
Cow position: chr11:39585294-39584984 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-310
Cow position: chr11:30104765-30104451 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-315
Cow position: chr11:84386374-84386063 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 121

Conread position: 1-321
Cow position: chr11:15720298-15719970 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 14

Conread position: 1-324
Cow position: chr11:32025305-32025627 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 238
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 98, 50

Conread position: 1-326
Cow position: chr11:42310035-42309714 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 228
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 98, 41

Conread position: 1-327
Cow position: chr11:72484791-72485120 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 219

Conread position: 1-347
Cow position: chr11:47737118-47736767 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-389
Cow position: chr11:7228681-7229073 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-389
Cow position: chr11:17834148-17833758 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 148

Conread position: 1-391
Cow position: chr11:77748207-77748600 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 152

Conread position: 1-401
Cow position: chr11:15987680-15988081 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 74

Conread position: 1-448
Cow position: chr11:44515347-44514894 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-451
Cow position: chr11:77777591-77777143 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 145

Conread position: 1-468
Cow position: chr11:8242699-8242230 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 55

Conread position: 1-471
Cow position: chr11:66945904-66945427 (view UCSC Genome Browser custom track)
Alignm length: 487
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 54

Conread position: 1-483
Cow position: chr11:3229548-3230027 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 235

Conread position: 1-490
Cow position: chr11:66859905-66859413 (view UCSC Genome Browser custom track)
Alignm length: 499
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 80

Conread position: 1-508
Cow position: chr11:72312884-72313388 (view UCSC Genome Browser custom track)
Alignm length: 514
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 100

Conread position: 1-509
Cow position: chr11:10129322-10128824 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 242

Conread position: 1-523
Cow position: chr11:5387898-5388401 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 185

Conread position: 1-535
Cow position: chr11:72365615-72366155 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-543
Cow position: chr11:76371638-76371096 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 243

Conread position: 1-560
Cow position: chr11:56917576-56917021 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 168

Conread position: 1-560
Cow position: chr11:61848306-61847741 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-570
Cow position: chr11:24395761-24396334 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 241

Conread position: 1-583
Cow position: chr11:35862200-35861639 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 187

Conread position: 1-584
Cow position: chr11:13045309-13044752 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 237

Conread position: 1-609
Cow position: chr11:32478385-32477765 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-614
Cow position: chr11:44516743-44516125 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-618
Cow position: chr11:64353895-64353266 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-626
Cow position: chr11:41177355-41177980 (view UCSC Genome Browser custom track)
Alignm length: 641
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 244

Conread position: 1-631
Cow position: chr11:39600434-39599782 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 73

Conread position: 1-685
Cow position: chr11:63653252-63652553 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 237

Conread position: 1-687
Cow position: chr11:50834331-50833633 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 242

Conread position: 1-733
Cow position: chr11:54727891-54728636 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 135

Conread position: 1-740
Cow position: chr11:10958248-10959009 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 85

Conread position: 1-749
Cow position: chr11:18889794-18890497 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 84

Conread position: 1-749
Cow position: chr11:40486593-40487342 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 113, 73

Conread position: 1-750
Cow position: chr11:9707575-9708338 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-764
Cow position: chr11:66731571-66732322 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 242

Conread position: 1-765
Cow position: chr11:25809316-25808541 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-796
Cow position: chr11:50511245-50510433 (view UCSC Genome Browser custom track)
Alignm length: 818
Alignm identity: 617
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-800
Cow position: chr11:30201262-30200454 (view UCSC Genome Browser custom track)
Alignm length: 817
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 58

Conread position: 1-837
Cow position: chr11:29663622-29662779 (view UCSC Genome Browser custom track)
Alignm length: 861
Alignm identity: 647
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 237

Conread position: 1-838
Cow position: chr11:11990416-11991284 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 680
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 295

Conread position: 1-838
Cow position: chr11:35738915-35738059 (view UCSC Genome Browser custom track)
Alignm length: 863
Alignm identity: 673
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-838
Cow position: chr11:40773602-40772788 (view UCSC Genome Browser custom track)
Alignm length: 863
Alignm identity: 639
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 175

Conread position: 1-839
Cow position: chr11:10850547-10851400 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 239

Conread position: 1-840
Cow position: chr11:21729578-21728732 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 603
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 179

Conread position: 1-842
Cow position: chr11:41168267-41167405 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 233

Conread position: 1-842
Cow position: chr11:43511544-43510686 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-843
Cow position: chr11:31928895-31929727 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 632
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 125

Conread position: 1-846
Cow position: chr11:8444560-8443698 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-847
Cow position: chr11:31865045-31865943 (view UCSC Genome Browser custom track)
Alignm length: 905
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 227

Conread position: 1-847
Cow position: chr11:49237535-49236681 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 58

Conread position: 1-848
Cow position: chr11:2534026-2534879 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-848
Cow position: chr11:2834704-2835556 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 622
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 56

Conread position: 1-848
Cow position: chr11:27659678-27660533 (view UCSC Genome Browser custom track)
Alignm length: 881
Alignm identity: 635
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 228

Conread position: 1-848
Cow position: chr11:47973424-47972561 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-848
Cow position: chr11:63391049-63390187 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 674
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 160

Conread position: 1-849
Cow position: chr11:27834333-27833458 (view UCSC Genome Browser custom track)
Alignm length: 884
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 34

Conread position: 1-850
Cow position: chr11:4024914-4024061 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 186

Conread position: 1-850
Cow position: chr11:4267724-4266858 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 134

Conread position: 1-850
Cow position: chr11:7121536-7120652 (view UCSC Genome Browser custom track)
Alignm length: 889
Alignm identity: 676
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr11:10699319-10698449 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 681
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 240

Conread position: 1-850
Cow position: chr11:11591412-11592278 (view UCSC Genome Browser custom track)
Alignm length: 881
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 73

Conread position: 1-850
Cow position: chr11:12317643-12316765 (view UCSC Genome Browser custom track)
Alignm length: 883
Alignm identity: 674
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 234

Conread position: 1-850
Cow position: chr11:12354466-12353595 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 673
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 244

Conread position: 1-850
Cow position: chr11:15835348-15836210 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 673
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr11:17105262-17104409 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 655
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr11:17280154-17279302 (view UCSC Genome Browser custom track)
Alignm length: 884
Alignm identity: 640
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 169

Conread position: 1-850
Cow position: chr11:17548585-17549455 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr11:19061647-19060776 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 675
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr11:19100056-19099191 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 674
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 232

Conread position: 1-850
Cow position: chr11:20731795-20730926 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 676
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr11:21897265-21896407 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 627
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 188

Conread position: 1-850
Cow position: chr11:25564183-25565044 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-850
Cow position: chr11:26122494-26121626 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 676
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 248

Conread position: 1-850
Cow position: chr11:27725473-27724604 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 242

Conread position: 1-850
Cow position: chr11:28124942-28125810 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 236

Conread position: 1-850
Cow position: chr11:28693539-28692685 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 75

Conread position: 1-850
Cow position: chr11:32454488-32455351 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 247

Conread position: 1-850
Cow position: chr11:33000319-33001168 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 640
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 100

Conread position: 1-850
Cow position: chr11:33602202-33601342 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 670
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 244

Conread position: 1-850
Cow position: chr11:35142895-35142038 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 655
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 39

Conread position: 1-850
Cow position: chr11:35542641-35541774 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 234

Conread position: 1-850
Cow position: chr11:38575055-38574188 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 665
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 169

Conread position: 1-850
Cow position: chr11:38833045-38832182 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 54

Conread position: 1-850
Cow position: chr11:40403333-40402486 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 239

Conread position: 1-850
Cow position: chr11:44154654-44153786 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 138

Conread position: 1-850
Cow position: chr11:44254502-44255368 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 134

Conread position: 1-850
Cow position: chr11:44580802-44579937 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 653
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 232

Conread position: 1-850
Cow position: chr11:49172073-49171207 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 244

Conread position: 1-850
Cow position: chr11:53429594-53428710 (view UCSC Genome Browser custom track)
Alignm length: 890
Alignm identity: 678
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 242

Conread position: 1-850
Cow position: chr11:57625747-57624890 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 236

Conread position: 1-850
Cow position: chr11:58136145-58137013 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 17

Conread position: 1-850
Cow position: chr11:58139137-58139987 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 160

Conread position: 1-850
Cow position: chr11:61398186-61397324 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 168

Conread position: 1-850
Cow position: chr11:63861209-63860347 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-850
Cow position: chr11:67296581-67295710 (view UCSC Genome Browser custom track)
Alignm length: 880
Alignm identity: 672
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-850
Cow position: chr11:71331929-71332796 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 674
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position: chr11:73799272-73798408 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 239

Conread position: 1-850
Cow position: chr11:75403070-75402228 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 648
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 158

Conread position: 1-850
Cow position: chr11:84966541-84967405 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 2-296
Cow position: chr11:27937832-27938124 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 149

Conread position: 2-505
Cow position: chr11:4033004-4032507 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 53

Conread position: 2-750
Cow position: chr11:86578355-86579115 (view UCSC Genome Browser custom track)
Alignm length: 774
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 235

Conread position: 3-408
Cow position: chr11:25183491-25183909 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 213

Conread position: 5-287
Cow position: chr11:14734949-14734661 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 237

Conread position: 5-322
Cow position: chr11:10869930-10870251 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 229
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 61, 157

Conread position: 5-443
Cow position: chr11:15127246-15127686 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 237

Conread position: 5-506
Cow position: chr11:21887996-21887495 (view UCSC Genome Browser custom track)
Alignm length: 507
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 197

Conread position: 5-508
Cow position: chr11:19072638-19073132 (view UCSC Genome Browser custom track)
Alignm length: 511
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 119

Conread position: 5-564
Cow position: chr11:9080117-9079568 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 50

Conread position: 5-573
Cow position: chr11:7373885-7374448 (view UCSC Genome Browser custom track)
Alignm length: 581
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 37

Conread position: 5-635
Cow position: chr11:39483719-39484341 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 54

Conread position: 5-676
Cow position: chr11:30190213-30190861 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 94

Conread position: 5-687
Cow position: chr11:26399913-26400607 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 236

Conread position: 5-763
Cow position: chr11:11256502-11257249 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 235

Conread position: 5-773
Cow position: chr11:60824217-60824987 (view UCSC Genome Browser custom track)
Alignm length: 788
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 61

Conread position: 5-800
Cow position: chr11:83284327-83285137 (view UCSC Genome Browser custom track)
Alignm length: 826
Alignm identity: 629
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 164

Conread position: 5-848
Cow position: chr11:59601042-59601888 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 151

Conread position: 5-850
Cow position: chr11:23494197-23495049 (view UCSC Genome Browser custom track)
Alignm length: 882
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 243

Conread position: 5-850
Cow position: chr11:32078348-32077486 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 228

Conread position: 5-850
Cow position: chr11:38640382-38641234 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 650
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 144

Conread position: 5-850
Cow position: chr11:56462792-56463659 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 670
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 240

Conread position: 6-384
Cow position: chr11:82146210-82145842 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 269
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 87, 155

Conread position: 6-467
Cow position: chr11:10215180-10214713 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 121

Conread position: 6-850
Cow position: chr11:26549913-26550773 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 239

Conread position: 7-813
Cow position: chr11:3495476-3496303 (view UCSC Genome Browser custom track)
Alignm length: 832
Alignm identity: 632
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 237

Conread position: 7-850
Cow position: chr11:28227346-28226481 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 228

Conread position: 8-850
Cow position: chr11:59871248-59872105 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 624
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 239

Conread position: 9-287
Cow position: chr11:13049507-13049235 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 200
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 142, 10

Conread position: 10-313
Cow position: chr11:3790231-3790533 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 116

Conread position: 10-454
Cow position: chr11:21648045-21648467 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 294
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 50, 8

Conread position: 10-746
Cow position: chr11:18147109-18146357 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 284

Conread position: 10-840
Cow position: chr11:42372261-42373085 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 102

Conread position: 10-850
Cow position: chr11:67453091-67453950 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 234

Conread position: 10-850
Cow position: chr11:74928236-74929105 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 649
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 234

Conread position: 11-472
Cow position: chr11:5982568-5983011 (view UCSC Genome Browser custom track)
Alignm length: 464
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 92

Conread position: 11-535
Cow position: chr11:28393330-28393844 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 146

Conread position: 11-849
Cow position: chr11:85391408-85390567 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 231

Conread position: 14-850
Cow position: chr11:6342901-6343756 (view UCSC Genome Browser custom track)
Alignm length: 862
Alignm identity: 670
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 228

Conread position: 14-850
Cow position: chr11:7680404-7681254 (view UCSC Genome Browser custom track)
Alignm length: 862
Alignm identity: 622
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 230

Conread position: 19-850
Cow position: chr11:41313741-41314592 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 216

Conread position: 21-321
Cow position: chr11:5280481-5280788 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 220
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 11, 223

Conread position: 23-560
Cow position: chr11:79749434-79748890 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 222

Conread position: 23-850
Cow position: chr11:75511743-75510903 (view UCSC Genome Browser custom track)
Alignm length: 854
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 212

Conread position: 26-442
Cow position: chr11:56891763-56891346 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 135

Conread position: 26-715
Cow position: chr11:48981747-48982444 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 202

Conread position: 26-848
Cow position: chr11:26785708-26786505 (view UCSC Genome Browser custom track)
Alignm length: 842
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 135

Conread position: 28-451
Cow position: chr11:38068723-38069149 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 53

Conread position: 29-396
Cow position: chr11:9238560-9238928 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 263
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 74, 188

Conread position: 35-766
Cow position: chr11:27922256-27923000 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 199

Conread position: 36-729
Cow position: chr11:22934135-22933458 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 132

Conread position: 36-848
Cow position: chr11:21477074-21477853 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 197

Conread position: 37-383
Cow position: chr11:85731501-85731156 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 97

Conread position: 37-841
Cow position: chr11:2568210-2567399 (view UCSC Genome Browser custom track)
Alignm length: 839
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 124

Conread position: 40-831
Cow position: chr11:60757507-60756710 (view UCSC Genome Browser custom track)
Alignm length: 806
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 95

Conread position: 42-425
Cow position: chr11:56652987-56652588 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 227

Conread position: 42-529
Cow position: chr11:8245633-8246126 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 197

Conread position: 42-843
Cow position: chr11:75553317-75552510 (view UCSC Genome Browser custom track)
Alignm length: 830
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 203

Conread position: 42-850
Cow position: chr11:41600220-41599396 (view UCSC Genome Browser custom track)
Alignm length: 834
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 192

Conread position: 46-450
Cow position: chr11:77747589-77747187 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 188

Conread position: 55-560
Cow position: chr11:60223205-60222694 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 56-350
Cow position: chr11:13063126-13062829 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 215
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 43, 15

Conread position: 56-634
Cow position: chr11:67954655-67954057 (view UCSC Genome Browser custom track)
Alignm length: 610
Alignm identity: 421
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 228

Conread position: 59-362
Cow position: chr11:38701858-38702165 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 179
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 40, 16

Conread position: 61-850
Cow position: chr11:48168576-48167789 (view UCSC Genome Browser custom track)
Alignm length: 813
Alignm identity: 596
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 151

Conread position: 65-850
Cow position: chr11:72368544-72369348 (view UCSC Genome Browser custom track)
Alignm length: 809
Alignm identity: 607
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 174

Conread position: 68-404
Cow position: chr11:33042256-33041920 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 227
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 29, 244

Conread position: 75-391
Cow position: chr11:46781827-46781509 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 11

Conread position: 80-648
Cow position: chr11:52462790-52463376 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 157

Conread position: 82-507
Cow position: chr11:43992271-43991842 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 288
Alignm E-value: 8.96831e-44
Alignm gaps (pig, cow): 22, 115

Conread position: 82-850
Cow position: chr11:65281532-65282307 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 9

Conread position: 83-611
Cow position: chr11:8266324-8266866 (view UCSC Genome Browser custom track)
Alignm length: 551
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 78

Conread position: 84-541
Cow position: chr11:14650276-14650744 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 161

Conread position: 103-362
Cow position: chr11:8201198-8200938 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 194
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 76, 132

Conread position: 103-459
Cow position: chr11:66739683-66739329 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 28

Conread position: 103-850
Cow position: chr11:1493312-1492576 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 132

Conread position: 103-850
Cow position: chr11:36930998-36930237 (view UCSC Genome Browser custom track)
Alignm length: 781
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 54

Conread position: 116-459
Cow position: chr11:83287183-83286839 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 15

Conread position: 121-382
Cow position: chr11:12411209-12411474 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 188
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 37

Conread position: 121-849
Cow position: chr11:29012776-29013488 (view UCSC Genome Browser custom track)
Alignm length: 745
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 36

Conread position: 121-850
Cow position: chr11:30928933-30929679 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 119

Conread position: 124-849
Cow position: chr11:7330144-7330849 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 110

Conread position: 131-675
Cow position: chr11:29613953-29614506 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 109

Conread position: 131-850
Cow position: chr11:18921022-18920301 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 26

Conread position: 132-445
Cow position: chr11:53690184-53690484 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 217
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 50, 14

Conread position: 132-850
Cow position: chr11:67920763-67920045 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 33

Conread position: 148-328
Cow position: chr11:32402281-32402101 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 31, 87

Conread position: 148-580
Cow position: chr11:81577325-81576897 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 92

Conread position: 148-842
Cow position: chr11:5482866-5482157 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 58

Conread position: 153-826
Cow position: chr11:39151182-39151869 (view UCSC Genome Browser custom track)
Alignm length: 694
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 86

Conread position: 157-408
Cow position: chr11:38021889-38021637 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 186
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 24, 83

Conread position: 159-846
Cow position: chr11:16230065-16229356 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 89

Conread position: 177-494
Cow position: chr11:46687612-46687914 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 80, 54

Conread position: 181-362
Cow position: chr11:37676816-37676994 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 152, 50

Conread position: 181-850
Cow position: chr11:33688404-33687767 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 181-850
Cow position: chr11:41261313-41260632 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 184-850
Cow position: chr11:73513743-73513072 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 264, 46

Conread position: 186-765
Cow position: chr11:58805196-58804619 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 267, 39

Conread position: 186-838
Cow position: chr11:8830155-8829503 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 102

Conread position: 187-850
Cow position: chr11:12177708-12178385 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 49

Conread position: 195-432
Cow position: chr11:9432058-9432289 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 138, 11

Conread position: 195-497
Cow position: chr11:37117703-37117997 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 211
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 258, 31

Conread position: 195-584
Cow position: chr11:29616666-29616292 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 41

Conread position: 195-844
Cow position: chr11:26068489-26067812 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 41

Conread position: 195-850
Cow position: chr11:14260329-14259669 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 36

Conread position: 195-850
Cow position: chr11:52846106-52846772 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 41

Conread position: 197-514
Cow position: chr11:42365930-42366245 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 209
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 136, 27

Conread position: 197-850
Cow position: chr11:44106307-44106975 (view UCSC Genome Browser custom track)
Alignm length: 678
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 39

Conread position: 198-850
Cow position: chr11:2285345-2286010 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 38

Conread position: 202-800
Cow position: chr11:24494172-24493564 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 34

Conread position: 204-747
Cow position: chr11:61426332-61426858 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 26

Conread position: 207-735
Cow position: chr11:28631174-28631708 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 29

Conread position: 214-850
Cow position: chr11:9387984-9388632 (view UCSC Genome Browser custom track)
Alignm length: 656
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 22

Conread position: 215-762
Cow position: chr11:15995133-15995697 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 21

Conread position: 216-848
Cow position: chr11:28598233-28597616 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 117, 66

Conread position: 231-468
Cow position: chr11:32254615-32254852 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 102, 51

Conread position: 233-840
Cow position: chr11:1667290-1667907 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 51

Conread position: 235-459
Cow position: chr11:72021090-72021316 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 49

Conread position: 236-431
Cow position: chr11:45157044-45156849 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 153
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 97, 46

Conread position: 236-609
Cow position: chr11:40134141-40133776 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 47

Conread position: 236-769
Cow position: chr11:32876276-32875730 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 236-798
Cow position: chr11:37279909-37279339 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 56

Conread position: 236-850
Cow position: chr11:7719848-7719218 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 236-850
Cow position: chr11:22618279-22617649 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 236-850
Cow position: chr11:51033954-51034573 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 46

Conread position: 241-388
Cow position: chr11:63617986-63617839 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 92, 41

Conread position: 241-846
Cow position: chr11:40457848-40458471 (view UCSC Genome Browser custom track)
Alignm length: 629
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 52

Conread position: 243-467
Cow position: chr11:29547492-29547706 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 101, 39

Conread position: 243-831
Cow position: chr11:81067423-81068008 (view UCSC Genome Browser custom track)
Alignm length: 604
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 39

Conread position: 245-849
Cow position: chr11:3795915-3796509 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 37

Conread position: 248-717
Cow position: chr11:17980612-17980137 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 34

Conread position: 248-850
Cow position: chr11:17853773-17854391 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 34

Conread position: 249-825
Cow position: chr11:10365709-10365130 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 36

Conread position: 257-842
Cow position: chr11:25335828-25336425 (view UCSC Genome Browser custom track)
Alignm length: 603
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 26

Conread position: 263-850
Cow position: chr11:26593084-26592480 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 30

Conread position: 273-473
Cow position: chr11:38842560-38842359 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 60, 18

Conread position: 275-848
Cow position: chr11:21471339-21471918 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 17

Conread position: 275-850
Cow position: chr11:30056918-30057496 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 53

Conread position: 282-838
Cow position: chr11:27284149-27284724 (view UCSC Genome Browser custom track)
Alignm length: 580
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 199

Conread position: 298-850
Cow position: chr11:44915958-44915389 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 55

Show alignments to all cow chromosomes.