Cow genome map

Conread name: Utr1-UTR010044B01

Conread position: 1-225
Cow position:
Alignm length: 233
Alignm identity: 177
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 98, 0

Conread position: 1-304
Cow position:
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 170

Conread position: 1-327
Cow position:
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-328
Cow position:
Alignm length: 336
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-351
Cow position:
Alignm length: 360
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-362
Cow position:
Alignm length: 371
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-381
Cow position:
Alignm length: 390
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 239

Conread position: 1-391
Cow position:
Alignm length: 401
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 153

Conread position: 1-402
Cow position:
Alignm length: 412
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 239

Conread position: 1-403
Cow position:
Alignm length: 413
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 244

Conread position: 1-409
Cow position:
Alignm length: 418
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-449
Cow position:
Alignm length: 458
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-537
Cow position:
Alignm length: 547
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-583
Cow position:
Alignm length: 594
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 1-584
Cow position:
Alignm length: 598
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 241

Conread position: 1-635
Cow position:
Alignm length: 651
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 253

Conread position: 1-635
Cow position:
Alignm length: 651
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-708
Cow position:
Alignm length: 727
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 52

Conread position: 1-721
Cow position:
Alignm length: 740
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 54

Conread position: 1-724
Cow position:
Alignm length: 742
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-729
Cow position:
Alignm length: 761
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 73

Conread position: 1-735
Cow position:
Alignm length: 753
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-742
Cow position:
Alignm length: 750
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 236

Conread position: 1-765
Cow position:
Alignm length: 794
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 242

Conread position: 1-813
Cow position:
Alignm length: 837
Alignm identity: 625
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 235

Conread position: 1-823
Cow position:
Alignm length: 844
Alignm identity: 625
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 128

Conread position: 1-840
Cow position:
Alignm length: 867
Alignm identity: 647
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 246

Conread position: 1-841
Cow position:
Alignm length: 866
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 238

Conread position: 1-841
Cow position:
Alignm length: 859
Alignm identity: 607
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 159

Conread position: 1-842
Cow position:
Alignm length: 866
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 159

Conread position: 1-848
Cow position:
Alignm length: 872
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 149

Conread position: 1-849
Cow position:
Alignm length: 891
Alignm identity: 633
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 161

Conread position: 1-850
Cow position:
Alignm length: 877
Alignm identity: 642
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 26

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position:
Alignm length: 891
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 159

Conread position: 1-850
Cow position:
Alignm length: 871
Alignm identity: 627
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 68

Conread position: 1-850
Cow position:
Alignm length: 873
Alignm identity: 676
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 160

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 234

Conread position: 1-850
Cow position:
Alignm length: 870
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 241

Conread position: 1-850
Cow position:
Alignm length: 871
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position:
Alignm length: 871
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 239

Conread position: 1-850
Cow position:
Alignm length: 886
Alignm identity: 638
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 132

Conread position: 1-850
Cow position:
Alignm length: 880
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 298

Conread position: 1-850
Cow position:
Alignm length: 879
Alignm identity: 640
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 217

Conread position: 1-850
Cow position:
Alignm length: 874
Alignm identity: 665
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position:
Alignm length: 876
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 160

Conread position: 1-850
Cow position:
Alignm length: 870
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 680
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 672
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position:
Alignm length: 872
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 1-850
Cow position:
Alignm length: 873
Alignm identity: 632
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position:
Alignm length: 876
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position:
Alignm length: 871
Alignm identity: 675
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position:
Alignm length: 873
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 2-511
Cow position:
Alignm length: 522
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 242

Conread position: 2-560
Cow position:
Alignm length: 569
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 148

Conread position: 5-445
Cow position:
Alignm length: 446
Alignm identity: 297
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 53, 27

Conread position: 5-574
Cow position:
Alignm length: 581
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 234

Conread position: 5-791
Cow position:
Alignm length: 818
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 251

Conread position: 5-849
Cow position:
Alignm length: 874
Alignm identity: 640
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 237

Conread position: 6-849
Cow position:
Alignm length: 869
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 236

Conread position: 7-259
Cow position:
Alignm length: 261
Alignm identity: 193
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 93, 134

Conread position: 7-584
Cow position:
Alignm length: 588
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 232

Conread position: 7-728
Cow position:
Alignm length: 761
Alignm identity: 551
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 232

Conread position: 7-813
Cow position:
Alignm length: 830
Alignm identity: 629
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 231

Conread position: 7-850
Cow position:
Alignm length: 869
Alignm identity: 648
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 206

Conread position: 10-287
Cow position:
Alignm length: 288
Alignm identity: 190
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 20, 112

Conread position: 10-732
Cow position:
Alignm length: 734
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 234

Conread position: 10-850
Cow position:
Alignm length: 864
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 120

Conread position: 10-850
Cow position:
Alignm length: 863
Alignm identity: 665
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 229

Conread position: 11-526
Cow position:
Alignm length: 523
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 74

Conread position: 11-850
Cow position:
Alignm length: 867
Alignm identity: 635
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 118

Conread position: 13-850
Cow position:
Alignm length: 865
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 215

Conread position: 19-850
Cow position:
Alignm length: 850
Alignm identity: 601
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 144

Conread position: 23-543
Cow position:
Alignm length: 527
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 88

Conread position: 27-353
Cow position:
Alignm length: 337
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 213

Conread position: 28-424
Cow position:
Alignm length: 407
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 120

Conread position: 31-451
Cow position:
Alignm length: 430
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 208

Conread position: 32-850
Cow position:
Alignm length: 857
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 199

Conread position: 34-845
Cow position:
Alignm length: 830
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 75

Conread position: 42-299
Cow position:
Alignm length: 266
Alignm identity: 191
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 57, 197

Conread position: 42-472
Cow position:
Alignm length: 441
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 186

Conread position: 46-465
Cow position:
Alignm length: 432
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 189

Conread position: 47-850
Cow position:
Alignm length: 836
Alignm identity: 628
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 249

Conread position: 56-850
Cow position:
Alignm length: 819
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 194

Conread position: 76-483
Cow position:
Alignm length: 421
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 166

Conread position: 76-751
Cow position:
Alignm length: 697
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 85

Conread position: 82-850
Cow position:
Alignm length: 794
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 9

Conread position: 86-490
Cow position:
Alignm length: 422
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 29

Conread position: 86-605
Cow position:
Alignm length: 533
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 155

Conread position: 86-735
Cow position:
Alignm length: 665
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 5

Conread position: 102-848
Cow position:
Alignm length: 762
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 133

Conread position: 109-542
Cow position:
Alignm length: 441
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 122

Conread position: 109-626
Cow position:
Alignm length: 526
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 28

Conread position: 112-850
Cow position:
Alignm length: 756
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 128

Conread position: 112-850
Cow position:
Alignm length: 752
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 125

Conread position: 114-531
Cow position:
Alignm length: 424
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 126

Conread position: 121-405
Cow position:
Alignm length: 289
Alignm identity: 186
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 53, 159

Conread position: 121-431
Cow position:
Alignm length: 316
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 91

Conread position: 123-843
Cow position:
Alignm length: 733
Alignm identity: 455
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 60, 22

Conread position: 136-850
Cow position:
Alignm length: 736
Alignm identity: 562
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 99

Conread position: 137-674
Cow position:
Alignm length: 565
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 30

Conread position: 137-850
Cow position:
Alignm length: 754
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 30

Conread position: 148-749
Cow position:
Alignm length: 616
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 90

Conread position: 157-769
Cow position:
Alignm length: 632
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 64

Conread position: 166-850
Cow position:
Alignm length: 707
Alignm identity: 540
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 74

Conread position: 166-850
Cow position:
Alignm length: 710
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 74

Conread position: 180-850
Cow position:
Alignm length: 699
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 32

Conread position: 181-453
Cow position:
Alignm length: 274
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 181-511
Cow position:
Alignm length: 333
Alignm identity: 223
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 272, 53

Conread position: 181-765
Cow position:
Alignm length: 600
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 81

Conread position: 181-822
Cow position:
Alignm length: 659
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 181-850
Cow position:
Alignm length: 685
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 50

Conread position: 181-850
Cow position:
Alignm length: 687
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 182-543
Cow position:
Alignm length: 364
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 54

Conread position: 182-850
Cow position:
Alignm length: 677
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 54

Conread position: 188-584
Cow position:
Alignm length: 402
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 48

Conread position: 197-489
Cow position:
Alignm length: 297
Alignm identity: 207
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 153, 39

Conread position: 208-832
Cow position:
Alignm length: 646
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 28

Conread position: 227-458
Cow position:
Alignm length: 235
Alignm identity: 179
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 5, 18

Conread position: 235-850
Cow position:
Alignm length: 632
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 48

Conread position: 238-631
Cow position:
Alignm length: 396
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 44

Conread position: 243-451
Cow position:
Alignm length: 210
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 39

Conread position: 243-496
Cow position:
Alignm length: 259
Alignm identity: 177
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 61, 39

Conread position: 243-560
Cow position:
Alignm length: 320
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 39

Conread position: 243-850
Cow position:
Alignm length: 626
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 39

Conread position: 250-849
Cow position:
Alignm length: 617
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 32

Conread position: 258-409
Cow position:
Alignm length: 153
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 75, 25

Conread position: 258-547
Cow position:
Alignm length: 292
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 34

Conread position: 267-849
Cow position:
Alignm length: 600
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 0

Conread position: 270-650
Cow position:
Alignm length: 390
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 277-848
Cow position:
Alignm length: 590
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 6

Show alignments to all cow chromosomes.