Cow genome map

Conread name: Utr1-UTR010044B01

Conread position: 1-224
Cow position: chr13:22778028-22778258 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 168
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 98, 74

Conread position: 1-225
Cow position: chr13:4734077-4734309 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 99, 0

Conread position: 1-225
Cow position: chr13:23455940-23456172 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 1-278
Cow position: chr13:33333850-33333569 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 124

Conread position: 1-284
Cow position: chr13:32922772-32922484 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-291
Cow position: chr13:17329684-17329396 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 201
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 98, 13

Conread position: 1-296
Cow position: chr13:34763486-34763196 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 215
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 24, 76

Conread position: 1-300
Cow position: chr13:644470-644167 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-305
Cow position: chr13:5515824-5515516 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-316
Cow position: chr13:46599088-46598768 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 98, 140

Conread position: 1-322
Cow position: chr13:51006521-51006196 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-388
Cow position: chr13:5718151-5717766 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 160

Conread position: 1-391
Cow position: chr13:60698299-60697909 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 124

Conread position: 1-400
Cow position: chr13:35539669-35540078 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-422
Cow position: chr13:36672159-36672582 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-428
Cow position: chr13:31726174-31725744 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 234

Conread position: 1-441
Cow position: chr13:24932289-24931843 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 233

Conread position: 1-473
Cow position: chr13:35685883-35686356 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 49

Conread position: 1-490
Cow position: chr13:30241050-30241542 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 235

Conread position: 1-505
Cow position: chr13:12565641-12565150 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 93

Conread position: 1-514
Cow position: chr13:5261257-5261772 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 112

Conread position: 1-542
Cow position: chr13:24237056-24237577 (view UCSC Genome Browser custom track)
Alignm length: 549
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 159

Conread position: 1-558
Cow position: chr13:30795211-30794653 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 235

Conread position: 1-561
Cow position: chr13:19637648-19638221 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 245

Conread position: 1-562
Cow position: chr13:34039838-34039272 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 160

Conread position: 1-580
Cow position: chr13:143617-143032 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-582
Cow position: chr13:6360369-6360955 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-583
Cow position: chr13:36347620-36347039 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 54

Conread position: 1-584
Cow position: chr13:8068700-8068111 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-584
Cow position: chr13:30305694-30306277 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 15

Conread position: 1-603
Cow position: chr13:28526808-28526195 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 244

Conread position: 1-619
Cow position: chr13:32253849-32253219 (view UCSC Genome Browser custom track)
Alignm length: 635
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-641
Cow position: chr13:34322461-34321830 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 170

Conread position: 1-652
Cow position: chr13:19566221-19566887 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 244

Conread position: 1-675
Cow position: chr13:31731067-31730382 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 134

Conread position: 1-685
Cow position: chr13:25890870-25891558 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 130

Conread position: 1-720
Cow position: chr13:32955954-32955229 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 140

Conread position: 1-720
Cow position: chr13:32982895-32982170 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 140

Conread position: 1-745
Cow position: chr13:58718057-58718805 (view UCSC Genome Browser custom track)
Alignm length: 772
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 29

Conread position: 1-751
Cow position: chr13:22275304-22276053 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 128

Conread position: 1-769
Cow position: chr13:2138677-2137890 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-775
Cow position: chr13:47575040-47574276 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 191

Conread position: 1-800
Cow position: chr13:20572199-20571394 (view UCSC Genome Browser custom track)
Alignm length: 820
Alignm identity: 620
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 167

Conread position: 1-804
Cow position: chr13:32549262-32550091 (view UCSC Genome Browser custom track)
Alignm length: 843
Alignm identity: 622
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 235

Conread position: 1-840
Cow position: chr13:18330623-18329763 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-840
Cow position: chr13:31509648-31510503 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 244

Conread position: 1-841
Cow position: chr13:561884-561026 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 240

Conread position: 1-843
Cow position: chr13:5230450-5229609 (view UCSC Genome Browser custom track)
Alignm length: 860
Alignm identity: 650
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 74

Conread position: 1-848
Cow position: chr13:3014681-3015551 (view UCSC Genome Browser custom track)
Alignm length: 888
Alignm identity: 617
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 55

Conread position: 1-848
Cow position: chr13:33632645-33631779 (view UCSC Genome Browser custom track)
Alignm length: 897
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 124

Conread position: 1-848
Cow position: chr13:34906064-34905223 (view UCSC Genome Browser custom track)
Alignm length: 862
Alignm identity: 672
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 31

Conread position: 1-850
Cow position: chr13:3021982-3021113 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 42

Conread position: 1-850
Cow position: chr13:3555914-3556783 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 670
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position: chr13:4943888-4944762 (view UCSC Genome Browser custom track)
Alignm length: 880
Alignm identity: 672
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 13

Conread position: 1-850
Cow position: chr13:6665631-6664756 (view UCSC Genome Browser custom track)
Alignm length: 880
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 243

Conread position: 1-850
Cow position: chr13:11389761-11390630 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 676
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 20

Conread position: 1-850
Cow position: chr13:11796197-11795332 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 209

Conread position: 1-850
Cow position: chr13:13333454-13332575 (view UCSC Genome Browser custom track)
Alignm length: 884
Alignm identity: 678
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 245

Conread position: 1-850
Cow position: chr13:14303480-14302615 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 670
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 137

Conread position: 1-850
Cow position: chr13:14400587-14399703 (view UCSC Genome Browser custom track)
Alignm length: 889
Alignm identity: 674
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 255

Conread position: 1-850
Cow position: chr13:16807099-16807958 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr13:18122368-18121499 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr13:20564471-20563607 (view UCSC Genome Browser custom track)
Alignm length: 884
Alignm identity: 648
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 53

Conread position: 1-850
Cow position: chr13:21837796-21836925 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-850
Cow position: chr13:26823594-26822767 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 59

Conread position: 1-850
Cow position: chr13:31608938-31608066 (view UCSC Genome Browser custom track)
Alignm length: 881
Alignm identity: 673
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 244

Conread position: 1-850
Cow position: chr13:31989379-31990240 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 222

Conread position: 1-850
Cow position: chr13:32080367-32081248 (view UCSC Genome Browser custom track)
Alignm length: 886
Alignm identity: 677
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 246

Conread position: 1-850
Cow position: chr13:32734684-32733819 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position: chr13:32794835-32793970 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 235

Conread position: 1-850
Cow position: chr13:34870463-34871332 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 52

Conread position: 1-850
Cow position: chr13:35760060-35760912 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 140

Conread position: 1-850
Cow position: chr13:36936234-36937092 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 233

Conread position: 1-850
Cow position: chr13:38611726-38612586 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position: chr13:44324445-44323597 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 633
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 93

Conread position: 1-850
Cow position: chr13:49976171-49977042 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-850
Cow position: chr13:50190569-50189702 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 658
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 150

Conread position: 1-850
Cow position: chr13:53051338-53052208 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 673
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position: chr13:53157886-53157017 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 128

Conread position: 1-850
Cow position: chr13:60647082-60646213 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 133

Conread position: 1-850
Cow position: chr13:61953753-61954624 (view UCSC Genome Browser custom track)
Alignm length: 881
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 183

Conread position: 2-514
Cow position: chr13:34940169-34940685 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 229

Conread position: 2-730
Cow position: chr13:30652785-30652040 (view UCSC Genome Browser custom track)
Alignm length: 752
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 293

Conread position: 2-850
Cow position: chr13:21906420-21905540 (view UCSC Genome Browser custom track)
Alignm length: 893
Alignm identity: 625
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 303

Conread position: 5-267
Cow position: chr13:19394524-19394257 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 202
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 78, 135

Conread position: 5-287
Cow position: chr13:42088930-42088641 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 217
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 55

Conread position: 5-492
Cow position: chr13:42072723-42072237 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 330
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 176, 103

Conread position: 5-531
Cow position: chr13:3481368-3480854 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 66

Conread position: 5-606
Cow position: chr13:1142514-1143108 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 50

Conread position: 5-680
Cow position: chr13:21401352-21402026 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 239

Conread position: 5-809
Cow position: chr13:60425534-60426358 (view UCSC Genome Browser custom track)
Alignm length: 838
Alignm identity: 636
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 9

Conread position: 5-848
Cow position: chr13:1882996-1882144 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 50

Conread position: 5-849
Cow position: chr13:4486361-4487224 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 26

Conread position: 5-850
Cow position: chr13:15921951-15921088 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 675
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 234

Conread position: 5-850
Cow position: chr13:34509309-34508456 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 643
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 85

Conread position: 6-245
Cow position: chr13:26846981-26847221 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 43, 32

Conread position: 6-837
Cow position: chr13:9571495-9570657 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 634
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 118

Conread position: 6-837
Cow position: chr13:22781471-22780630 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 639
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 119

Conread position: 6-850
Cow position: chr13:13902366-13903227 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 665
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 156

Conread position: 7-251
Cow position: chr13:28861252-28861506 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 192
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 92, 0

Conread position: 7-719
Cow position: chr13:22714403-22715123 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 204

Conread position: 7-850
Cow position: chr13:33523448-33522584 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 234

Conread position: 7-850
Cow position: chr13:50111974-50112839 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 647
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 237

Conread position: 10-746
Cow position: chr13:19424136-19424902 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 33

Conread position: 10-850
Cow position: chr13:9300682-9301529 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 223

Conread position: 11-225
Cow position: chr13:46427098-46427318 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 88, 31

Conread position: 11-460
Cow position: chr13:14737404-14737859 (view UCSC Genome Browser custom track)
Alignm length: 461
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 242

Conread position: 12-403
Cow position: chr13:15279298-15278903 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 234

Conread position: 12-584
Cow position: chr13:43121035-43120458 (view UCSC Genome Browser custom track)
Alignm length: 583
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 224

Conread position: 19-846
Cow position: chr13:47569621-47570439 (view UCSC Genome Browser custom track)
Alignm length: 843
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 69

Conread position: 19-850
Cow position: chr13:34344806-34345674 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 286

Conread position: 23-547
Cow position: chr13:3651918-3651390 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 215

Conread position: 23-722
Cow position: chr13:7608673-7609382 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 126

Conread position: 32-692
Cow position: chr13:17318836-17318172 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 8

Conread position: 33-432
Cow position: chr13:30242756-30243160 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 216

Conread position: 35-850
Cow position: chr13:1591618-1590781 (view UCSC Genome Browser custom track)
Alignm length: 844
Alignm identity: 647
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 205

Conread position: 40-850
Cow position: chr13:28699359-28700193 (view UCSC Genome Browser custom track)
Alignm length: 841
Alignm identity: 627
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 203

Conread position: 40-850
Cow position: chr13:30469574-30468746 (view UCSC Genome Browser custom track)
Alignm length: 837
Alignm identity: 642
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 198

Conread position: 48-400
Cow position: chr13:43591840-43592194 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 7

Conread position: 49-850
Cow position: chr13:16249392-16248573 (view UCSC Genome Browser custom track)
Alignm length: 829
Alignm identity: 644
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 143

Conread position: 50-850
Cow position: chr13:28131057-28131875 (view UCSC Genome Browser custom track)
Alignm length: 823
Alignm identity: 627
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 194

Conread position: 51-850
Cow position: chr13:58312884-58313704 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 626
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 188

Conread position: 59-458
Cow position: chr13:47729238-47728836 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 185

Conread position: 61-770
Cow position: chr13:34376964-34376240 (view UCSC Genome Browser custom track)
Alignm length: 732
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 141

Conread position: 76-699
Cow position: chr13:3001765-3001138 (view UCSC Genome Browser custom track)
Alignm length: 645
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 6

Conread position: 76-704
Cow position: chr13:18761674-18761043 (view UCSC Genome Browser custom track)
Alignm length: 650
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 46

Conread position: 85-848
Cow position: chr13:3783711-3784501 (view UCSC Genome Browser custom track)
Alignm length: 800
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 50

Conread position: 97-850
Cow position: chr13:42087526-42086761 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 138

Conread position: 102-405
Cow position: chr13:43160307-43160610 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 222
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 79, 138

Conread position: 102-850
Cow position: chr13:20538939-20538199 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 129

Conread position: 103-281
Cow position: chr13:15986985-15986806 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 76, 132

Conread position: 103-651
Cow position: chr13:19239516-19240062 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 128

Conread position: 130-850
Cow position: chr13:43975308-43974586 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 107

Conread position: 148-670
Cow position: chr13:14411518-14410987 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 82

Conread position: 148-850
Cow position: chr13:23267178-23266461 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 93

Conread position: 166-574
Cow position: chr13:20483835-20484244 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 69

Conread position: 180-449
Cow position: chr13:9537164-9536898 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 51

Conread position: 180-839
Cow position: chr13:26987221-26986557 (view UCSC Genome Browser custom track)
Alignm length: 679
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 48

Conread position: 181-368
Cow position: chr13:49747998-49748183 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 152, 55

Conread position: 181-663
Cow position: chr13:29791037-29791497 (view UCSC Genome Browser custom track)
Alignm length: 486
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 7

Conread position: 183-675
Cow position: chr13:14522972-14522497 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 330
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 121, 50

Conread position: 186-850
Cow position: chr13:29055733-29055056 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 50

Conread position: 186-850
Cow position: chr13:39911100-39911770 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 45

Conread position: 194-850
Cow position: chr13:26204755-26204087 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 42

Conread position: 195-473
Cow position: chr13:28132181-28132457 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 41

Conread position: 196-850
Cow position: chr13:680756-681423 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 511
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 40

Conread position: 197-385
Cow position: chr13:33501490-33501305 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 120, 29

Conread position: 203-451
Cow position: chr13:9112487-9112732 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 30

Conread position: 205-850
Cow position: chr13:3657636-3656982 (view UCSC Genome Browser custom track)
Alignm length: 660
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 31

Conread position: 213-681
Cow position: chr13:45933473-45933946 (view UCSC Genome Browser custom track)
Alignm length: 478
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 23

Conread position: 234-663
Cow position: chr13:11053569-11053143 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 16

Conread position: 236-509
Cow position: chr13:42271880-42272152 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 189
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 97, 58

Conread position: 236-547
Cow position: chr13:17921776-17921459 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 42

Conread position: 236-633
Cow position: chr13:52459416-52459023 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 236-800
Cow position: chr13:6719422-6718845 (view UCSC Genome Browser custom track)
Alignm length: 579
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 236-837
Cow position: chr13:13126965-13126369 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 40

Conread position: 242-500
Cow position: chr13:46598546-46598287 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 27, 41

Conread position: 249-839
Cow position: chr13:2805526-2804921 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 14

Conread position: 274-850
Cow position: chr13:55337523-55338109 (view UCSC Genome Browser custom track)
Alignm length: 588
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 18

Conread position: 287-699
Cow position: chr13:18097830-18097409 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 412

Conread position: 302-848
Cow position: chr13:11571860-11571307 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 381
Alignm E-value: 0
Alignm gaps (pig, cow): 232, 154

Show alignments to all cow chromosomes.