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Cow genome map

           
Conread name:
           
Utr1-UTR010044B01
        

               
Conread position:
               
1-224
               

               
Cow position:
               
chr15:16514438-16514664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr15:2590022-2589790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr15:2592383-2592151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr15:27748386-27748618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr15:4727583-4727841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr15:25331803-25332068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr15:8753253-8753553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 54
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr15:24297570-24297865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 160
               

               
Conread position:
               
1-304
               

               
Cow position:
               
chr15:31363840-31364149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 240
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr15:52440512-52440835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
48, 240
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr15:29341674-29341342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
98, 232
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr15:6153554-6153224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 242
               

               
Conread position:
               
1-328
               

               
Cow position:
               
chr15:52208916-52209247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr15:32741343-32741695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-357
               

               
Cow position:
               
chr15:3792519-3792157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 244
               

               
Conread position:
               
1-361
               

               
Cow position:
               
chr15:25204629-25204269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 133
               

               
Conread position:
               
1-362
               

               
Cow position:
               
chr15:52977333-52977699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-366
               

               
Cow position:
               
chr15:6487835-6488203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 243
               

               
Conread position:
               
1-382
               

               
Cow position:
               
chr15:6381678-6381286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 245
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr15:23709136-23708749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-389
               

               
Cow position:
               
chr15:14579769-14579383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 238
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr15:29003288-29003680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
1-428
               

               
Cow position:
               
chr15:18660693-18661125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 243
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr15:4768557-4768992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 235
               

               
Conread position:
               
1-434
               

               
Cow position:
               
chr15:1328219-1328653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-437
               

               
Cow position:
               
chr15:7236680-7237115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 239
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr15:21452318-21452780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 31
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr15:50120369-50119864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 197
               

               
Conread position:
               
1-526
               

               
Cow position:
               
chr15:21966413-21966941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
1-578
               

               
Cow position:
               
chr15:34517514-34518089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
446
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 239
               

               
Conread position:
               
1-580
               

               
Cow position:
               
chr15:6384176-6383592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 124
               

               
Conread position:
               
1-580
               

               
Cow position:
               
chr15:12365781-12366357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 133
               

               
Conread position:
               
1-593
               

               
Cow position:
               
chr15:2795571-2796167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-609
               

               
Cow position:
               
chr15:42944231-42943616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 239
               

               
Conread position:
               
1-652
               

               
Cow position:
               
chr15:4653847-4654508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 232
               

               
Conread position:
               
1-655
               

               
Cow position:
               
chr15:24090204-24090871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-662
               

               
Cow position:
               
chr15:31586022-31585348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
508
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 54
               

               
Conread position:
               
1-665
               

               
Cow position:
               
chr15:3153187-3152519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
499
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
1-681
               

               
Cow position:
               
chr15:2633329-2632639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 111
               

               
Conread position:
               
1-691
               

               
Cow position:
               
chr15:21830313-21831017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
713
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 252
               

               
Conread position:
               
1-700
               

               
Cow position:
               
chr15:13430200-13430908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
541
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 240
               

               
Conread position:
               
1-702
               

               
Cow position:
               
chr15:32491512-32490799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 243
               

               
Conread position:
               
1-717
               

               
Cow position:
               
chr15:2663764-2664492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
734
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-721
               

               
Cow position:
               
chr15:8101834-8102554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 167
               

               
Conread position:
               
1-735
               

               
Cow position:
               
chr15:17295384-17296123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
547
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 160
               

               
Conread position:
               
1-735
               

               
Cow position:
               
chr15:31270495-31269750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
567
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-736
               

               
Cow position:
               
chr15:25553522-25554264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
563
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 147
               

               
Conread position:
               
1-740
               

               
Cow position:
               
chr15:9522827-9522070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
762
               

               
Alignm identity:
               
569
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 235
               

               
Conread position:
               
1-755
               

               
Cow position:
               
chr15:11269379-11270137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
763
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-760
               

               
Cow position:
               
chr15:21663366-21662591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
784
               

               
Alignm identity:
               
603
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 243
               

               
Conread position:
               
1-765
               

               
Cow position:
               
chr15:18229442-18230217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
781
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 198
               

               
Conread position:
               
1-778
               

               
Cow position:
               
chr15:16800650-16801443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
800
               

               
Alignm identity:
               
596
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-798
               

               
Cow position:
               
chr15:36623283-36622480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
819
               

               
Alignm identity:
               
619
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 17
               

               
Conread position:
               
1-800
               

               
Cow position:
               
chr15:4814941-4815745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
828
               

               
Alignm identity:
               
596
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 13
               

               
Conread position:
               
1-800
               

               
Cow position:
               
chr15:18579106-18579915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
822
               

               
Alignm identity:
               
614
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 158
               

               
Conread position:
               
1-800
               

               
Cow position:
               
chr15:23275199-23274420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
812
               

               
Alignm identity:
               
534
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 241
               

               
Conread position:
               
1-833
               

               
Cow position:
               
chr15:3258131-3257286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
860
               

               
Alignm identity:
               
626
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 233
               

               
Conread position:
               
1-838
               

               
Cow position:
               
chr15:5983021-5983863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
647
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 20
               

               
Conread position:
               
1-839
               

               
Cow position:
               
chr15:6164716-6163869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
658
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 241
               

               
Conread position:
               
1-840
               

               
Cow position:
               
chr15:7840712-7841556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
653
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 50
               

               
Conread position:
               
1-840
               

               
Cow position:
               
chr15:14573925-14573086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
598
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 48
               

               
Conread position:
               
1-840
               

               
Cow position:
               
chr15:15344727-15343873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
656
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 234
               

               
Conread position:
               
1-840
               

               
Cow position:
               
chr15:51220117-51220974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
668
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 238
               

               
Conread position:
               
1-841
               

               
Cow position:
               
chr15:4828711-4829566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
593
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 81
               

               
Conread position:
               
1-841
               

               
Cow position:
               
chr15:7577516-7578398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
886
               

               
Alignm identity:
               
619
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 454
               

               
Conread position:
               
1-841
               

               
Cow position:
               
chr15:44072824-44073682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
660
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 127
               

               
Conread position:
               
1-846
               

               
Cow position:
               
chr15:43830-44704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
890
               

               
Alignm identity:
               
630
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 236
               

               
Conread position:
               
1-848
               

               
Cow position:
               
chr15:313428-312557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
879
               

               
Alignm identity:
               
658
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 242
               

               
Conread position:
               
1-848
               

               
Cow position:
               
chr15:2019683-2020495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
858
               

               
Alignm identity:
               
571
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 121
               

               
Conread position:
               
1-849
               

               
Cow position:
               
chr15:5019768-5020607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
636
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-849
               

               
Cow position:
               
chr15:38983036-38983919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
888
               

               
Alignm identity:
               
636
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:29931-29063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
654
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 242
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:443412-442544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
660
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 239
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:480960-481825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
658
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:1775528-1776406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
893
               

               
Alignm identity:
               
618
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 98
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:1785145-1786012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
660
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 221
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:2644974-2644102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
878
               

               
Alignm identity:
               
662
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 242
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:3008457-3007593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
661
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 169
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:3721755-3720894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
644
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 128
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:3891943-3892830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
903
               

               
Alignm identity:
               
665
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 66
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:4388123-4388993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
670
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 151
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:4788420-4787566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
642
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 48
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:4924540-4925391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
654
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 247
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:5497429-5498300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
882
               

               
Alignm identity:
               
651
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 242
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:6119764-6120625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
877
               

               
Alignm identity:
               
667
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 148
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:6551240-6550368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
653
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 248
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:6616174-6617044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
664
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:7318944-7319811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
674
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 234
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:7565379-7566246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
647
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 234
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:7587405-7586541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
871
               

               
Alignm identity:
               
652
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:10735933-10736809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
889
               

               
Alignm identity:
               
629
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 235
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:12418334-12417469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
666
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 245
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:13682714-13683576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
880
               

               
Alignm identity:
               
683
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:17035252-17034388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
666
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 160
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:18019992-18019142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
604
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
358, 91
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:18265385-18264515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
663
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:19735423-19734553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
681
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 243
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:20412971-20413820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
867
               

               
Alignm identity:
               
633
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 100
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:21636650-21637518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
664
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 233
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:21806225-21807095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
665
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:21825241-21826112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
877
               

               
Alignm identity:
               
661
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 243
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:25132332-25133208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
882
               

               
Alignm identity:
               
667
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 244
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:32702361-32701492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
879
               

               
Alignm identity:
               
640
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 251
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:32714079-32714945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
649
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:35644075-35643223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
660
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 225
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:35750919-35750053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
667
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:36941010-36940137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
879
               

               
Alignm identity:
               
656
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 41
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:41359385-41360246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
879
               

               
Alignm identity:
               
612
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 6
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:42939287-42940154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
881
               

               
Alignm identity:
               
663
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 248
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr15:47202188-47201328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
868
               

               
Alignm identity:
               
665
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 243
               

               
Conread position:
               
2-255
               

               
Cow position:
               
chr15:32065880-32065622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
101, 231
               

               
Conread position:
               
2-840
               

               
Cow position:
               
chr15:36670546-36671393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
862
               

               
Alignm identity:
               
621
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 287
               

               
Conread position:
               
3-848
               

               
Cow position:
               
chr15:51911153-51910289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
877
               

               
Alignm identity:
               
636
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 158
               

               
Conread position:
               
3-850
               

               
Cow position:
               
chr15:7940809-7941662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
668
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 122
               

               
Conread position:
               
3-850
               

               
Cow position:
               
chr15:25070116-25069248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
671
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 157
               

               
Conread position:
               
5-326
               

               
Cow position:
               
chr15:6493311-6493629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
5-419
               

               
Cow position:
               
chr15:13388993-13388568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 234
               

               
Conread position:
               
5-840
               

               
Cow position:
               
chr15:4219531-4218683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
859
               

               
Alignm identity:
               
632
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 52
               

               
Conread position:
               
5-849
               

               
Cow position:
               
chr15:6081078-6081921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
871
               

               
Alignm identity:
               
625
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 147
               

               
Conread position:
               
5-850
               

               
Cow position:
               
chr15:4688412-4689274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
666
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 239
               

               
Conread position:
               
5-850
               

               
Cow position:
               
chr15:6589555-6588689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
644
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 242
               

               
Conread position:
               
5-850
               

               
Cow position:
               
chr15:7270721-7271586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
652
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 156
               

               
Conread position:
               
6-635
               

               
Cow position:
               
chr15:7058108-7058741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
453
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 113
               

               
Conread position:
               
6-767
               

               
Cow position:
               
chr15:32718228-32717457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
782
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 235
               

               
Conread position:
               
6-850
               

               
Cow position:
               
chr15:2617682-2616835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
609
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 34
               

               
Conread position:
               
7-228
               

               
Cow position:
               
chr15:21912135-21911913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
92, 112
               

               
Conread position:
               
7-349
               

               
Cow position:
               
chr15:10825855-10826205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 235
               

               
Conread position:
               
7-593
               

               
Cow position:
               
chr15:4917573-4918161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 79
               

               
Conread position:
               
7-850
               

               
Cow position:
               
chr15:36330078-36329214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
662
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 228
               

               
Conread position:
               
10-470
               

               
Cow position:
               
chr15:334811-335264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 79
               

               
Conread position:
               
10-840
               

               
Cow position:
               
chr15:13546663-13545846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
846
               

               
Alignm identity:
               
609
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 234
               

               
Conread position:
               
10-850
               

               
Cow position:
               
chr15:4629863-4628995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
883
               

               
Alignm identity:
               
645
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 246
               

               
Conread position:
               
10-850
               

               
Cow position:
               
chr15:28487742-28486897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
862
               

               
Alignm identity:
               
642
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 71
               

               
Conread position:
               
11-850
               

               
Cow position:
               
chr15:4641590-4642445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
656
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
11-850
               

               
Cow position:
               
chr15:8029630-8028769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
644
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 238
               

               
Conread position:
               
11-850
               

               
Cow position:
               
chr15:22540431-22539594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
642
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 228
               

               
Conread position:
               
12-850
               

               
Cow position:
               
chr15:5641200-5640345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
658
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 12
               

               
Conread position:
               
12-850
               

               
Cow position:
               
chr15:30044784-30045653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
622
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 232
               

               
Conread position:
               
19-505
               

               
Cow position:
               
chr15:28480501-28480018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
32, 223
               

               
Conread position:
               
19-624
               

               
Cow position:
               
chr15:6762702-6762085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 225
               

               
Conread position:
               
19-850
               

               
Cow position:
               
chr15:12858538-12859387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
857
               

               
Alignm identity:
               
660
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 67
               

               
Conread position:
               
23-850
               

               
Cow position:
               
chr15:4081399-4082230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
850
               

               
Alignm identity:
               
634
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 222
               

               
Conread position:
               
27-349
               

               
Cow position:
               
chr15:14756373-14756706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
72, 271
               

               
Conread position:
               
27-850
               

               
Cow position:
               
chr15:17074960-17074116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
647
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 212
               

               
Conread position:
               
31-440
               

               
Cow position:
               
chr15:20405210-20404799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 204
               

               
Conread position:
               
37-308
               

               
Cow position:
               
chr15:50309088-50308813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 202
               

               
Conread position:
               
38-538
               

               
Cow position:
               
chr15:23797540-23798051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 184
               

               
Conread position:
               
39-824
               

               
Cow position:
               
chr15:42532464-42533266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
807
               

               
Alignm identity:
               
620
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 196
               

               
Conread position:
               
40-458
               

               
Cow position:
               
chr15:16967085-16966662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 204
               

               
Conread position:
               
40-850
               

               
Cow position:
               
chr15:7267019-7267847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
838
               

               
Alignm identity:
               
636
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 89
               

               
Conread position:
               
41-848
               

               
Cow position:
               
chr15:1759660-1758847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
833
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 40
               

               
Conread position:
               
42-850
               

               
Cow position:
               
chr15:4140492-4139668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
835
               

               
Alignm identity:
               
638
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 197
               

               
Conread position:
               
45-225
               

               
Cow position:
               
chr15:4199411-4199601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
45-846
               

               
Cow position:
               
chr15:21155882-21156692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
829
               

               
Alignm identity:
               
547
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 125
               

               
Conread position:
               
51-850
               

               
Cow position:
               
chr15:23667064-23666248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
821
               

               
Alignm identity:
               
592
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 189
               

               
Conread position:
               
55-773
               

               
Cow position:
               
chr15:23773736-23774460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
739
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 189
               

               
Conread position:
               
65-850
               

               
Cow position:
               
chr15:11627849-11628644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
810
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 9
               

               
Conread position:
               
66-850
               

               
Cow position:
               
chr15:6330584-6331355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
798
               

               
Alignm identity:
               
589
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 15
               

               
Conread position:
               
72-850
               

               
Cow position:
               
chr15:26591899-26591104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
802
               

               
Alignm identity:
               
600
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 167
               

               
Conread position:
               
74-588
               

               
Cow position:
               
chr15:32858315-32858835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 170
               

               
Conread position:
               
75-800
               

               
Cow position:
               
chr15:17266958-17267709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
568
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 174
               

               
Conread position:
               
81-850
               

               
Cow position:
               
chr15:7963578-7962804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
81-850
               

               
Cow position:
               
chr15:39091752-39090973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
808
               

               
Alignm identity:
               
568
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 76
               

               
Conread position:
               
87-431
               

               
Cow position:
               
chr15:25165824-25165475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 152
               

               
Conread position:
               
97-624
               

               
Cow position:
               
chr15:19724249-19724780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 140
               

               
Conread position:
               
102-580
               

               
Cow position:
               
chr15:502795-503274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 123
               

               
Conread position:
               
103-709
               

               
Cow position:
               
chr15:4673823-4674431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
230, 83
               

               
Conread position:
               
106-665
               

               
Cow position:
               
chr15:2952665-2952101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 125
               

               
Conread position:
               
112-264
               

               
Cow position:
               
chr15:2079680-2079833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
69, 123
               

               
Conread position:
               
116-848
               

               
Cow position:
               
chr15:15864746-15865475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
754
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 117
               

               
Conread position:
               
117-412
               

               
Cow position:
               
chr15:42827578-42827870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
118-735
               

               
Cow position:
               
chr15:4077637-4077009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 126
               

               
Conread position:
               
121-850
               

               
Cow position:
               
chr15:1773946-1774690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
753
               

               
Alignm identity:
               
560
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 119
               

               
Conread position:
               
122-846
               

               
Cow position:
               
chr15:4626912-4626181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
742
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
125-641
               

               
Cow position:
               
chr15:2898486-2897973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 110
               

               
Conread position:
               
134-423
               

               
Cow position:
               
chr15:21645590-21645300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 101
               

               
Conread position:
               
137-716
               

               
Cow position:
               
chr15:21367102-21366500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 9
               

               
Conread position:
               
137-838
               

               
Cow position:
               
chr15:1081961-1082667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
727
               

               
Alignm identity:
               
489
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 99
               

               
Conread position:
               
137-839
               

               
Cow position:
               
chr15:1129467-1128760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
725
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 94
               

               
Conread position:
               
148-616
               

               
Cow position:
               
chr15:4380796-4380322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 91
               

               
Conread position:
               
148-850
               

               
Cow position:
               
chr15:24796396-24797079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
716
               

               
Alignm identity:
               
548
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
151-775
               

               
Cow position:
               
chr15:6281183-6281808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 54
               

               
Conread position:
               
152-841
               

               
Cow position:
               
chr15:6805245-6805948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
711
               

               
Alignm identity:
               
540
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 85
               

               
Conread position:
               
180-494
               

               
Cow position:
               
chr15:20429802-20430104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
273, 47
               

               
Conread position:
               
180-687
               

               
Cow position:
               
chr15:6658553-6658038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 57
               

               
Conread position:
               
180-835
               

               
Cow position:
               
chr15:35404540-35405203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
487
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 50
               

               
Conread position:
               
181-561
               

               
Cow position:
               
chr15:44666647-44666269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 53
               

               
Conread position:
               
181-795
               

               
Cow position:
               
chr15:33753716-33753094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
629
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 55
               

               
Conread position:
               
181-840
               

               
Cow position:
               
chr15:4952891-4953554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
506
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 50
               

               
Conread position:
               
181-848
               

               
Cow position:
               
chr15:11575444-11574776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
511
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
181-850
               

               
Cow position:
               
chr15:22760425-22759754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
691
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 50
               

               
Conread position:
               
182-724
               

               
Cow position:
               
chr15:13286537-13285994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 45
               

               
Conread position:
               
184-850
               

               
Cow position:
               
chr15:4727739-4728396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 35
               

               
Conread position:
               
187-401
               

               
Cow position:
               
chr15:7932210-7932421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
146, 40
               

               
Conread position:
               
189-694
               

               
Cow position:
               
chr15:37373554-37373045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 49
               

               
Conread position:
               
192-838
               

               
Cow position:
               
chr15:33305212-33304563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
498
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 44
               

               
Conread position:
               
195-412
               

               
Cow position:
               
chr15:42726792-42727005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
195-590
               

               
Cow position:
               
chr15:32697328-32697716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 36
               

               
Conread position:
               
195-621
               

               
Cow position:
               
chr15:32646938-32647366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 41
               

               
Conread position:
               
195-850
               

               
Cow position:
               
chr15:45244172-45244834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
670
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 32
               

               
Conread position:
               
196-838
               

               
Cow position:
               
chr15:37394309-37394936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
490
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 40
               

               
Conread position:
               
198-629
               

               
Cow position:
               
chr15:4104180-4103753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
222, 33
               

               
Conread position:
               
203-765
               

               
Cow position:
               
chr15:36356478-36355914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 33
               

               
Conread position:
               
206-850
               

               
Cow position:
               
chr15:7985841-7985181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
505
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 30
               

               
Conread position:
               
230-771
               

               
Cow position:
               
chr15:6043235-6043763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 52
               

               
Conread position:
               
231-391
               

               
Cow position:
               
chr15:7780513-7780360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 50
               

               
Conread position:
               
231-848
               

               
Cow position:
               
chr15:16514806-16515446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
448
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 6
               

               
Conread position:
               
233-724
               

               
Cow position:
               
chr15:5196968-5197462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 49
               

               
Conread position:
               
233-836
               

               
Cow position:
               
chr15:609506-608890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
235-850
               

               
Cow position:
               
chr15:4213784-4214406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
627
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 47
               

               
Conread position:
               
235-850
               

               
Cow position:
               
chr15:12442149-12442771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
475
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 33
               

               
Conread position:
               
236-389
               

               
Cow position:
               
chr15:15738678-15738831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 46
               

               
Conread position:
               
236-533
               

               
Cow position:
               
chr15:461611-461909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 46
               

               
Conread position:
               
236-850
               

               
Cow position:
               
chr15:27747904-27747269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 46
               

               
Conread position:
               
238-681
               

               
Cow position:
               
chr15:24047885-24048349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 45
               

               
Conread position:
               
240-810
               

               
Cow position:
               
chr15:5002830-5002248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 13
               

               
Conread position:
               
243-635
               

               
Cow position:
               
chr15:49242693-49242293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
243-850
               

               
Cow position:
               
chr15:34063574-34064187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 50
               

               
Conread position:
               
258-846
               

               
Cow position:
               
chr15:50345092-50344492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 34
               

               
Conread position:
               
264-483
               

               
Cow position:
               
chr15:33455055-33455270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
69, 19
               

               
Conread position:
               
275-457
               

               
Cow position:
               
chr15:1669757-1669940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
159, 8
               

               
Conread position:
               
282-681
               

               
Cow position:
               
chr15:1298992-1298587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 73
               

               
Conread position:
               
284-603
               

               
Cow position:
               
chr15:21840930-21841251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 38
               

               
Conread position:
               
297-747
               

               
Cow position:
               
chr15:52464567-52464112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 63
               

               
Conread position:
               
300-584
               

               
Cow position:
               
chr15:8696949-8696675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
153, 85
               

               
Conread position:
               
311-526
               

               
Cow position:
               
chr15:9436047-9436275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
22, 58
               

               
Conread position:
               
313-619
               

               
Cow position:
               
chr15:39419180-39419476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
23, 48
               
Show alignments to all cow chromosomes.