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Cow genome map

           
Conread name:
           
Utr1-UTR010044B01
        

               
Conread position:
               
1-225
               

               
Cow position:
               
chr16:16538814-16539037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
100, 54
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr16:3144370-3144134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
1-258
               

               
Cow position:
               
chr16:16230341-16230608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
100, 166
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr16:51401822-51401529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
54, 104
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr16:41564380-41564650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
180, 93
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr16:56861338-56861630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 248
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr16:1565648-1565352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 243
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr16:20968771-20968475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 243
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr16:1434225-1434524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 238
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr16:42734604-42734300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 170
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr16:36241163-36241476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 233
               

               
Conread position:
               
1-321
               

               
Cow position:
               
chr16:41161441-41161106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 249
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr16:5591331-5591659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
27, 51
               

               
Conread position:
               
1-372
               

               
Cow position:
               
chr16:16238796-16238416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 244
               

               
Conread position:
               
1-386
               

               
Cow position:
               
chr16:28268817-28268436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 154
               

               
Conread position:
               
1-397
               

               
Cow position:
               
chr16:46521020-46520609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 296
               

               
Conread position:
               
1-403
               

               
Cow position:
               
chr16:54175430-54175832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 38
               

               
Conread position:
               
1-421
               

               
Cow position:
               
chr16:25453479-25453073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 14
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr16:54431602-54432031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr16:5487800-5488233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 143
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chr16:29049460-29049895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 238
               

               
Conread position:
               
1-443
               

               
Cow position:
               
chr16:24621669-24621222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chr16:23364883-23364419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 241
               

               
Conread position:
               
1-462
               

               
Cow position:
               
chr16:48012632-48012184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
81, 238
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr16:11744569-11745041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-474
               

               
Cow position:
               
chr16:34505726-34506207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 240
               

               
Conread position:
               
1-497
               

               
Cow position:
               
chr16:6945286-6945790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 245
               

               
Conread position:
               
1-524
               

               
Cow position:
               
chr16:13539396-13538867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-530
               

               
Cow position:
               
chr16:25260153-25260686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 233
               

               
Conread position:
               
1-543
               

               
Cow position:
               
chr16:19887052-19887595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 243
               

               
Conread position:
               
1-584
               

               
Cow position:
               
chr16:3010864-3011455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 241
               

               
Conread position:
               
1-605
               

               
Cow position:
               
chr16:28168289-28167681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
454
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 237
               

               
Conread position:
               
1-620
               

               
Cow position:
               
chr16:44127810-44127195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
476
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 234
               

               
Conread position:
               
1-622
               

               
Cow position:
               
chr16:49529435-49530063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
637
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 54
               

               
Conread position:
               
1-631
               

               
Cow position:
               
chr16:23876501-23875869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-647
               

               
Cow position:
               
chr16:27711149-27710519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
658
               

               
Alignm identity:
               
467
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 80
               

               
Conread position:
               
1-648
               

               
Cow position:
               
chr16:2394398-2395051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
483
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 231
               

               
Conread position:
               
1-677
               

               
Cow position:
               
chr16:51040582-51041252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
690
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 235
               

               
Conread position:
               
1-681
               

               
Cow position:
               
chr16:34532323-34533011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 242
               

               
Conread position:
               
1-702
               

               
Cow position:
               
chr16:31586669-31585959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
537
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 55
               

               
Conread position:
               
1-711
               

               
Cow position:
               
chr16:39474857-39475585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
743
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 247
               

               
Conread position:
               
1-719
               

               
Cow position:
               
chr16:3819393-3820132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
557
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 135
               

               
Conread position:
               
1-721
               

               
Cow position:
               
chr16:55591947-55591241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
550
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 232
               

               
Conread position:
               
1-727
               

               
Cow position:
               
chr16:49231246-49230512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
553
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 88
               

               
Conread position:
               
1-740
               

               
Cow position:
               
chr16:25087638-25088398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
766
               

               
Alignm identity:
               
580
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 88
               

               
Conread position:
               
1-764
               

               
Cow position:
               
chr16:45704764-45703993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
783
               

               
Alignm identity:
               
600
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 215
               

               
Conread position:
               
1-776
               

               
Cow position:
               
chr16:41515163-41515955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
803
               

               
Alignm identity:
               
596
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 92
               

               
Conread position:
               
1-798
               

               
Cow position:
               
chr16:7674431-7673625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
816
               

               
Alignm identity:
               
591
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 87
               

               
Conread position:
               
1-800
               

               
Cow position:
               
chr16:20377490-20378290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
816
               

               
Alignm identity:
               
636
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 238
               

               
Conread position:
               
1-829
               

               
Cow position:
               
chr16:8872401-8871564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
863
               

               
Alignm identity:
               
611
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 59
               

               
Conread position:
               
1-838
               

               
Cow position:
               
chr16:12161251-12160398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
862
               

               
Alignm identity:
               
660
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 234
               

               
Conread position:
               
1-839
               

               
Cow position:
               
chr16:14352652-14351796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
666
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 238
               

               
Conread position:
               
1-842
               

               
Cow position:
               
chr16:23985339-23986203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
651
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 244
               

               
Conread position:
               
1-847
               

               
Cow position:
               
chr16:48909610-48908777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
553
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 94
               

               
Conread position:
               
1-848
               

               
Cow position:
               
chr16:26653698-26654552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
615
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 146
               

               
Conread position:
               
1-848
               

               
Cow position:
               
chr16:41624625-41623815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
620
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 15
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:193905-193041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
666
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 159
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:416923-417793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
667
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 27
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:2408866-2407994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
877
               

               
Alignm identity:
               
677
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 234
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:2725194-2724326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
671
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 234
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:3149002-3148143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
663
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:3331938-3332787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
627
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 255
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:3769982-3769110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
878
               

               
Alignm identity:
               
666
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 243
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:4426120-4426988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
662
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 27
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:4462282-4461430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
653
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 73
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:5526077-5525202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
881
               

               
Alignm identity:
               
653
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 244
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:10440269-10441136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
662
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 54
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:11633815-11632946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
681
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:12535910-12535070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
649
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:12650958-12651818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
665
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 87
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:14663078-14662225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
662
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 80
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:15187095-15187956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
666
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 244
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:15311311-15312179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
665
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:15569798-15570663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
657
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 210
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:15812097-15812980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
890
               

               
Alignm identity:
               
673
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 149
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:15980357-15979480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
883
               

               
Alignm identity:
               
672
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 246
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:16031923-16032780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
595
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 160
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:16150720-16149850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
670
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 239
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:16267867-16267021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
607
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 242
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:16539439-16540295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
632
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 246
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:18974894-18975766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
878
               

               
Alignm identity:
               
671
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 246
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:21017588-21018456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
670
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 140
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:24210363-24209500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
662
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 54
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:24406939-24407810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
877
               

               
Alignm identity:
               
665
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 149
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:25344004-25344876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
878
               

               
Alignm identity:
               
667
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 245
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:25443905-25444774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
679
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 239
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:25455434-25454580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
654
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 244
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:26665744-26666609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
878
               

               
Alignm identity:
               
672
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 98
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:27731353-27730483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
669
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 240
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:29035922-29036757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
635
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 230
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:37478832-37477963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
664
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:39615267-39616113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
871
               

               
Alignm identity:
               
606
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 161
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:40294142-40293272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
670
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:42074860-42073996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
878
               

               
Alignm identity:
               
666
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 80
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:43895234-43894365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
877
               

               
Alignm identity:
               
673
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 241
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:46554452-46555320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
668
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 73
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:47403412-47404278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
662
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:47772291-47773162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
878
               

               
Alignm identity:
               
627
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 242
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chr16:52526260-52527128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
680
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 243
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr16:23097135-23096807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 237
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr16:23098370-23098698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 237
               

               
Conread position:
               
2-467
               

               
Cow position:
               
chr16:17111281-17111752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 242
               

               
Conread position:
               
2-817
               

               
Cow position:
               
chr16:49219929-49219094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
841
               

               
Alignm identity:
               
592
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 309
               

               
Conread position:
               
2-850
               

               
Cow position:
               
chr16:8814071-8813207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
666
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 123
               

               
Conread position:
               
3-850
               

               
Cow position:
               
chr16:50713386-50712541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
650
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 147
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chr16:7083679-7084048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 248
               

               
Conread position:
               
5-395
               

               
Cow position:
               
chr16:16960831-16960439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
28, 114
               

               
Conread position:
               
5-410
               

               
Cow position:
               
chr16:41029776-41029370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
88, 238
               

               
Conread position:
               
5-584
               

               
Cow position:
               
chr16:20642520-20643105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
445
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 158
               

               
Conread position:
               
5-840
               

               
Cow position:
               
chr16:15494492-15495341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
860
               

               
Alignm identity:
               
640
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 71
               

               
Conread position:
               
5-841
               

               
Cow position:
               
chr16:7466646-7467497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
651
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 234
               

               
Conread position:
               
5-841
               

               
Cow position:
               
chr16:23249957-23249066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
894
               

               
Alignm identity:
               
664
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 302
               

               
Conread position:
               
5-846
               

               
Cow position:
               
chr16:23562479-23563339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
880
               

               
Alignm identity:
               
657
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 284
               

               
Conread position:
               
5-846
               

               
Cow position:
               
chr16:49254201-49253370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
853
               

               
Alignm identity:
               
657
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 148
               

               
Conread position:
               
5-849
               

               
Cow position:
               
chr16:29157684-29158497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
861
               

               
Alignm identity:
               
638
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 28
               

               
Conread position:
               
5-850
               

               
Cow position:
               
chr16:839316-840168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
660
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 234
               

               
Conread position:
               
5-850
               

               
Cow position:
               
chr16:51086815-51087680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
684
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 239
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr16:46224546-46224240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
93, 155
               

               
Conread position:
               
6-850
               

               
Cow position:
               
chr16:20204034-20204877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
657
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 238
               

               
Conread position:
               
7-389
               

               
Cow position:
               
chr16:5663825-5664208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 44
               

               
Conread position:
               
7-400
               

               
Cow position:
               
chr16:44661772-44662156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 54
               

               
Conread position:
               
7-509
               

               
Cow position:
               
chr16:34535-35042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 25
               

               
Conread position:
               
7-626
               

               
Cow position:
               
chr16:37146011-37146638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 237
               

               
Conread position:
               
7-657
               

               
Cow position:
               
chr16:26389135-26388471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
493
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 236
               

               
Conread position:
               
7-850
               

               
Cow position:
               
chr16:4756061-4756908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
653
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
7-850
               

               
Cow position:
               
chr16:26990913-26990043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
877
               

               
Alignm identity:
               
656
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 223
               

               
Conread position:
               
7-850
               

               
Cow position:
               
chr16:46102582-46101721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
868
               

               
Alignm identity:
               
665
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 237
               

               
Conread position:
               
8-487
               

               
Cow position:
               
chr16:15411026-15410543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 60
               

               
Conread position:
               
10-293
               

               
Cow position:
               
chr16:18495710-18495426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 9
               

               
Conread position:
               
10-850
               

               
Cow position:
               
chr16:17141445-17142297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
868
               

               
Alignm identity:
               
619
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 223
               

               
Conread position:
               
10-850
               

               
Cow position:
               
chr16:56914209-56913340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
883
               

               
Alignm identity:
               
640
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 243
               

               
Conread position:
               
11-271
               

               
Cow position:
               
chr16:29207183-29206924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
74, 82
               

               
Conread position:
               
11-850
               

               
Cow position:
               
chr16:28194262-28193403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
657
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 228
               

               
Conread position:
               
12-271
               

               
Cow position:
               
chr16:49463539-49463275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
87, 227
               

               
Conread position:
               
12-412
               

               
Cow position:
               
chr16:25168130-25168511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
321, 93
               

               
Conread position:
               
14-321
               

               
Cow position:
               
chr16:6266912-6266607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
87, 18
               

               
Conread position:
               
14-518
               

               
Cow position:
               
chr16:15178730-15179223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 209
               

               
Conread position:
               
18-715
               

               
Cow position:
               
chr16:21189304-21190014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
543
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 5
               

               
Conread position:
               
18-850
               

               
Cow position:
               
chr16:2233664-2232828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
853
               

               
Alignm identity:
               
632
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 132
               

               
Conread position:
               
21-784
               

               
Cow position:
               
chr16:30696503-30695737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
787
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
50, 183
               

               
Conread position:
               
23-607
               

               
Cow position:
               
chr16:42117805-42118379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 211
               

               
Conread position:
               
23-800
               

               
Cow position:
               
chr16:18694918-18694121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
809
               

               
Alignm identity:
               
584
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 216
               

               
Conread position:
               
23-848
               

               
Cow position:
               
chr16:19798633-19797795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
857
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 49
               

               
Conread position:
               
31-261
               

               
Cow position:
               
chr16:6733809-6733574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
68, 208
               

               
Conread position:
               
33-850
               

               
Cow position:
               
chr16:28469055-28468225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
835
               

               
Alignm identity:
               
514
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 203
               

               
Conread position:
               
43-294
               

               
Cow position:
               
chr16:4962880-4962626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
42, 197
               

               
Conread position:
               
55-512
               

               
Cow position:
               
chr16:14440453-14440917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
66-504
               

               
Cow position:
               
chr16:7009151-7009585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 91
               

               
Conread position:
               
68-382
               

               
Cow position:
               
chr16:25936862-25937175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
33, 80
               

               
Conread position:
               
74-560
               

               
Cow position:
               
chr16:48496037-48495543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 173
               

               
Conread position:
               
83-277
               

               
Cow position:
               
chr16:3349065-3349264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
18, 157
               

               
Conread position:
               
86-518
               

               
Cow position:
               
chr16:23672680-23673101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 72
               

               
Conread position:
               
94-800
               

               
Cow position:
               
chr16:25964039-25964744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
718
               

               
Alignm identity:
               
539
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 44
               

               
Conread position:
               
100-845
               

               
Cow position:
               
chr16:4973391-4972631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
591
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 135
               

               
Conread position:
               
103-567
               

               
Cow position:
               
chr16:24988583-24988117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 137
               

               
Conread position:
               
103-782
               

               
Cow position:
               
chr16:54180219-54179537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
698
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 132
               

               
Conread position:
               
104-802
               

               
Cow position:
               
chr16:44049788-44049077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
532
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 136
               

               
Conread position:
               
106-850
               

               
Cow position:
               
chr16:41036887-41036143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
764
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 134
               

               
Conread position:
               
107-424
               

               
Cow position:
               
chr16:28066195-28066513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 133
               

               
Conread position:
               
109-848
               

               
Cow position:
               
chr16:25892674-25893400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
758
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 12
               

               
Conread position:
               
109-850
               

               
Cow position:
               
chr16:40677-41433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
761
               

               
Alignm identity:
               
571
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 129
               

               
Conread position:
               
109-850
               

               
Cow position:
               
chr16:28206968-28206213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
763
               

               
Alignm identity:
               
589
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 48
               

               
Conread position:
               
109-850
               

               
Cow position:
               
chr16:43563252-43562498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
762
               

               
Alignm identity:
               
584
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 116
               

               
Conread position:
               
110-850
               

               
Cow position:
               
chr16:4343762-4343020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
759
               

               
Alignm identity:
               
551
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 126
               

               
Conread position:
               
114-850
               

               
Cow position:
               
chr16:2480995-2480260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
748
               

               
Alignm identity:
               
558
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 17
               

               
Conread position:
               
122-841
               

               
Cow position:
               
chr16:13422765-13422037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
745
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
124-848
               

               
Cow position:
               
chr16:28473768-28473059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
741
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 113
               

               
Conread position:
               
127-848
               

               
Cow position:
               
chr16:43770988-43770262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 19
               

               
Conread position:
               
128-843
               

               
Cow position:
               
chr16:10860155-10859443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
735
               

               
Alignm identity:
               
491
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 39
               

               
Conread position:
               
132-850
               

               
Cow position:
               
chr16:1733905-1734634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
738
               

               
Alignm identity:
               
561
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 64
               

               
Conread position:
               
141-850
               

               
Cow position:
               
chr16:42210668-42211394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
731
               

               
Alignm identity:
               
557
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 94
               

               
Conread position:
               
148-547
               

               
Cow position:
               
chr16:26316890-26317291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 92
               

               
Conread position:
               
148-850
               

               
Cow position:
               
chr16:19081231-19081944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
723
               

               
Alignm identity:
               
545
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
153-750
               

               
Cow position:
               
chr16:37925789-37925194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
612
               

               
Alignm identity:
               
460
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 45
               

               
Conread position:
               
157-778
               

               
Cow position:
               
chr16:7154790-7155422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 83
               

               
Conread position:
               
173-539
               

               
Cow position:
               
chr16:54479414-54479778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 58
               

               
Conread position:
               
180-850
               

               
Cow position:
               
chr16:55150570-55151225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 60
               

               
Conread position:
               
181-414
               

               
Cow position:
               
chr16:29685659-29685438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
181-652
               

               
Cow position:
               
chr16:37487041-37486563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 55
               

               
Conread position:
               
181-850
               

               
Cow position:
               
chr16:14100070-14100746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 46
               

               
Conread position:
               
181-850
               

               
Cow position:
               
chr16:27593606-27592926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 55
               

               
Conread position:
               
181-850
               

               
Cow position:
               
chr16:45608631-45609306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
680
               

               
Alignm identity:
               
526
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 50
               

               
Conread position:
               
182-470
               

               
Cow position:
               
chr16:24146247-24146515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
269, 45
               

               
Conread position:
               
186-850
               

               
Cow position:
               
chr16:23533776-23533102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
518
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 41
               

               
Conread position:
               
194-848
               

               
Cow position:
               
chr16:45655359-45654679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 37
               

               
Conread position:
               
197-456
               

               
Cow position:
               
chr16:15549084-15549340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
139, 37
               

               
Conread position:
               
197-530
               

               
Cow position:
               
chr16:42742304-42741980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
200-751
               

               
Cow position:
               
chr16:37455244-37454695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 25
               

               
Conread position:
               
209-848
               

               
Cow position:
               
chr16:47367242-47367865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
652
               

               
Alignm identity:
               
462
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 27
               

               
Conread position:
               
210-850
               

               
Cow position:
               
chr16:10373189-10372538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 26
               

               
Conread position:
               
212-609
               

               
Cow position:
               
chr16:49170721-49170336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 70
               

               
Conread position:
               
213-692
               

               
Cow position:
               
chr16:14569942-14569467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 13
               

               
Conread position:
               
214-723
               

               
Cow position:
               
chr16:19671987-19671487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 69
               

               
Conread position:
               
227-680
               

               
Cow position:
               
chr16:5763105-5763558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 57
               

               
Conread position:
               
230-726
               

               
Cow position:
               
chr16:12244779-12244278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 19
               

               
Conread position:
               
235-843
               

               
Cow position:
               
chr16:340049-340644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 58
               

               
Conread position:
               
236-473
               

               
Cow position:
               
chr16:9431802-9431564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 46
               

               
Conread position:
               
236-850
               

               
Cow position:
               
chr16:6676988-6677615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
479
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 46
               

               
Conread position:
               
241-512
               

               
Cow position:
               
chr16:49577233-49577489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
95, 41
               

               
Conread position:
               
241-579
               

               
Cow position:
               
chr16:10812336-10812676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
241-844
               

               
Cow position:
               
chr16:4398522-4399132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 42
               

               
Conread position:
               
241-850
               

               
Cow position:
               
chr16:15349874-15349264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
621
               

               
Alignm identity:
               
472
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
243-735
               

               
Cow position:
               
chr16:37053313-37053814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
248-520
               

               
Cow position:
               
chr16:712640-712913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 34
               

               
Conread position:
               
248-800
               

               
Cow position:
               
chr16:45559574-45560147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 35
               

               
Conread position:
               
248-846
               

               
Cow position:
               
chr16:50518481-50519066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
622
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
85, 9
               

               
Conread position:
               
251-473
               

               
Cow position:
               
chr16:42746145-42745933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
85, 31
               

               
Conread position:
               
251-674
               

               
Cow position:
               
chr16:13777194-13777611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 41
               

               
Conread position:
               
252-481
               

               
Cow position:
               
chr16:16231069-16231299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 31
               

               
Conread position:
               
253-850
               

               
Cow position:
               
chr16:37446414-37445806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
611
               

               
Alignm identity:
               
458
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 31
               

               
Conread position:
               
254-449
               

               
Cow position:
               
chr16:26672257-26672063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
79, 28
               

               
Conread position:
               
262-848
               

               
Cow position:
               
chr16:50874547-50873964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
262-850
               

               
Cow position:
               
chr16:5435119-5435723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 20
               

               
Conread position:
               
263-848
               

               
Cow position:
               
chr16:37058714-37058105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
269-850
               

               
Cow position:
               
chr16:5416966-5416377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
270-843
               

               
Cow position:
               
chr16:7303058-7303648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 22
               

               
Conread position:
               
276-850
               

               
Cow position:
               
chr16:1958415-1957828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 144
               

               
Conread position:
               
276-850
               

               
Cow position:
               
chr16:45465609-45465022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
592
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
277-850
               

               
Cow position:
               
chr16:599738-600318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 16
               

               
Conread position:
               
281-850
               

               
Cow position:
               
chr16:52856530-52855967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 234
               

               
Conread position:
               
282-850
               

               
Cow position:
               
chr16:37671182-37670611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 46
               

               
Conread position:
               
287-850
               

               
Cow position:
               
chr16:22799386-22798806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
451
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
302-526
               

               
Cow position:
               
chr16:42176234-42176459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
61, 25
               
Show alignments to all cow chromosomes.