Cow genome map

Conread name: Utr1-UTR010044B01

Conread position: 1-223
Cow position:
Alignm length: 237
Alignm identity: 173
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 102, 24

Conread position: 1-225
Cow position:
Alignm length: 233
Alignm identity: 178
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 98, 0

Conread position: 1-225
Cow position:
Alignm length: 232
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 1-260
Cow position:
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 239

Conread position: 1-281
Cow position:
Alignm length: 294
Alignm identity: 211
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 98, 204

Conread position: 1-303
Cow position:
Alignm length: 311
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-321
Cow position:
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 1-327
Cow position:
Alignm length: 328
Alignm identity: 228
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 41, 31

Conread position: 1-328
Cow position:
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 237

Conread position: 1-328
Cow position:
Alignm length: 337
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-357
Cow position:
Alignm length: 367
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-374
Cow position:
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 239

Conread position: 1-388
Cow position:
Alignm length: 397
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 160

Conread position: 1-403
Cow position:
Alignm length: 413
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 32

Conread position: 1-431
Cow position:
Alignm length: 440
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 222

Conread position: 1-432
Cow position:
Alignm length: 452
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 254

Conread position: 1-432
Cow position:
Alignm length: 439
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 88

Conread position: 1-451
Cow position:
Alignm length: 460
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-455
Cow position:
Alignm length: 466
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 239

Conread position: 1-473
Cow position:
Alignm length: 483
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 137

Conread position: 1-484
Cow position:
Alignm length: 494
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 243

Conread position: 1-497
Cow position:
Alignm length: 509
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 245

Conread position: 1-507
Cow position:
Alignm length: 517
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 55

Conread position: 1-507
Cow position:
Alignm length: 517
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 55

Conread position: 1-513
Cow position:
Alignm length: 533
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 52

Conread position: 1-514
Cow position:
Alignm length: 523
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-559
Cow position:
Alignm length: 571
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 160

Conread position: 1-587
Cow position:
Alignm length: 594
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 102

Conread position: 1-601
Cow position:
Alignm length: 613
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 242

Conread position: 1-681
Cow position:
Alignm length: 698
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 19

Conread position: 1-700
Cow position:
Alignm length: 726
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 125

Conread position: 1-740
Cow position:
Alignm length: 759
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-745
Cow position:
Alignm length: 766
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 125

Conread position: 1-747
Cow position:
Alignm length: 762
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 58

Conread position: 1-751
Cow position:
Alignm length: 770
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-764
Cow position:
Alignm length: 775
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 60

Conread position: 1-800
Cow position:
Alignm length: 820
Alignm identity: 496
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 109, 90

Conread position: 1-833
Cow position:
Alignm length: 859
Alignm identity: 633
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 30

Conread position: 1-840
Cow position:
Alignm length: 864
Alignm identity: 630
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 37

Conread position: 1-841
Cow position:
Alignm length: 874
Alignm identity: 630
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 244

Conread position: 1-841
Cow position:
Alignm length: 867
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-846
Cow position:
Alignm length: 867
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 15

Conread position: 1-848
Cow position:
Alignm length: 876
Alignm identity: 646
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 245

Conread position: 1-848
Cow position:
Alignm length: 864
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 1-849
Cow position:
Alignm length: 876
Alignm identity: 638
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 39

Conread position: 1-849
Cow position:
Alignm length: 858
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 181

Conread position: 1-849
Cow position:
Alignm length: 879
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 160

Conread position: 1-849
Cow position:
Alignm length: 880
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 235

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 68

Conread position: 1-850
Cow position:
Alignm length: 888
Alignm identity: 646
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 68

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 160

Conread position: 1-850
Cow position:
Alignm length: 870
Alignm identity: 641
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 37

Conread position: 1-850
Cow position:
Alignm length: 874
Alignm identity: 643
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 159

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 244

Conread position: 1-850
Cow position:
Alignm length: 877
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-850
Cow position:
Alignm length: 879
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 241

Conread position: 1-850
Cow position:
Alignm length: 874
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 244

Conread position: 1-850
Cow position:
Alignm length: 885
Alignm identity: 672
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 243

Conread position: 1-850
Cow position:
Alignm length: 882
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 242

Conread position: 1-850
Cow position:
Alignm length: 880
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 8

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 13

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 128

Conread position: 1-850
Cow position:
Alignm length: 883
Alignm identity: 650
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 245

Conread position: 1-850
Cow position:
Alignm length: 868
Alignm identity: 648
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 232

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 174

Conread position: 1-850
Cow position:
Alignm length: 882
Alignm identity: 677
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 244

Conread position: 1-850
Cow position:
Alignm length: 876
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 241

Conread position: 1-850
Cow position:
Alignm length: 876
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 135

Conread position: 1-850
Cow position:
Alignm length: 873
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-850
Cow position:
Alignm length: 877
Alignm identity: 674
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position:
Alignm length: 879
Alignm identity: 649
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 240

Conread position: 2-387
Cow position:
Alignm length: 396
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 133

Conread position: 2-691
Cow position:
Alignm length: 708
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 160

Conread position: 2-840
Cow position:
Alignm length: 862
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 17

Conread position: 2-850
Cow position:
Alignm length: 863
Alignm identity: 632
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 234

Conread position: 2-850
Cow position:
Alignm length: 870
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 238

Conread position: 5-436
Cow position:
Alignm length: 443
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 10

Conread position: 5-583
Cow position:
Alignm length: 589
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 227

Conread position: 5-847
Cow position:
Alignm length: 873
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 27

Conread position: 5-850
Cow position:
Alignm length: 873
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 11

Conread position: 6-850
Cow position:
Alignm length: 866
Alignm identity: 606
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 238

Conread position: 7-254
Cow position:
Alignm length: 256
Alignm identity: 189
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 92, 232

Conread position: 7-322
Cow position:
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 237

Conread position: 7-839
Cow position:
Alignm length: 873
Alignm identity: 619
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 132

Conread position: 8-584
Cow position:
Alignm length: 587
Alignm identity: 372
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 166, 11

Conread position: 10-293
Cow position:
Alignm length: 294
Alignm identity: 206
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 59, 148

Conread position: 10-850
Cow position:
Alignm length: 874
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 237

Conread position: 11-740
Cow position:
Alignm length: 746
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 45

Conread position: 11-757
Cow position:
Alignm length: 766
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 114

Conread position: 12-813
Cow position:
Alignm length: 828
Alignm identity: 626
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 8

Conread position: 12-846
Cow position:
Alignm length: 866
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 224

Conread position: 15-843
Cow position:
Alignm length: 859
Alignm identity: 534
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 73, 45

Conread position: 16-526
Cow position:
Alignm length: 516
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 26

Conread position: 17-850
Cow position:
Alignm length: 865
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 224

Conread position: 18-850
Cow position:
Alignm length: 858
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 132

Conread position: 19-765
Cow position:
Alignm length: 757
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 126

Conread position: 20-735
Cow position:
Alignm length: 735
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 202

Conread position: 32-587
Cow position:
Alignm length: 565
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 23

Conread position: 33-850
Cow position:
Alignm length: 837
Alignm identity: 626
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 67

Conread position: 34-847
Cow position:
Alignm length: 845
Alignm identity: 619
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 201

Conread position: 35-349
Cow position:
Alignm length: 318
Alignm identity: 218
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 67, 129

Conread position: 35-848
Cow position:
Alignm length: 846
Alignm identity: 605
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 87

Conread position: 35-850
Cow position:
Alignm length: 843
Alignm identity: 642
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 20

Conread position: 37-843
Cow position:
Alignm length: 834
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 116

Conread position: 59-460
Cow position:
Alignm length: 410
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 40

Conread position: 62-850
Cow position:
Alignm length: 812
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 177

Conread position: 65-288
Cow position:
Alignm length: 231
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 95

Conread position: 75-850
Cow position:
Alignm length: 789
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 129

Conread position: 76-353
Cow position:
Alignm length: 286
Alignm identity: 200
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 23, 159

Conread position: 77-499
Cow position:
Alignm length: 434
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 61

Conread position: 96-735
Cow position:
Alignm length: 657
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 56

Conread position: 102-451
Cow position:
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 53

Conread position: 103-791
Cow position:
Alignm length: 708
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 133

Conread position: 103-835
Cow position:
Alignm length: 766
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 139

Conread position: 131-449
Cow position:
Alignm length: 323
Alignm identity: 214
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 93

Conread position: 132-850
Cow position:
Alignm length: 739
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 103

Conread position: 137-509
Cow position:
Alignm length: 379
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 97

Conread position: 148-442
Cow position:
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 92

Conread position: 148-838
Cow position:
Alignm length: 712
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 58

Conread position: 164-700
Cow position:
Alignm length: 542
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 76

Conread position: 174-560
Cow position:
Alignm length: 389
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 62

Conread position: 181-473
Cow position:
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 181-519
Cow position:
Alignm length: 357
Alignm identity: 237
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 211, 53

Conread position: 181-547
Cow position:
Alignm length: 369
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 181-841
Cow position:
Alignm length: 684
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 198-601
Cow position:
Alignm length: 408
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 14

Conread position: 208-328
Cow position:
Alignm length: 121
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 209-850
Cow position:
Alignm length: 659
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 27

Conread position: 230-414
Cow position:
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 230-628
Cow position:
Alignm length: 402
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 17

Conread position: 235-850
Cow position:
Alignm length: 632
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 47

Conread position: 236-626
Cow position:
Alignm length: 410
Alignm identity: 273
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 100, 46

Conread position: 237-650
Cow position:
Alignm length: 425
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 21

Conread position: 239-802
Cow position:
Alignm length: 571
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 43

Conread position: 241-431
Cow position:
Alignm length: 192
Alignm identity: 147
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 92, 40

Conread position: 243-850
Cow position:
Alignm length: 625
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 39

Conread position: 245-850
Cow position:
Alignm length: 622
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 38

Conread position: 250-543
Cow position:
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 32

Conread position: 263-850
Cow position:
Alignm length: 614
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 21

Conread position: 283-850
Cow position:
Alignm length: 575
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 102

Conread position: 292-527
Cow position:
Alignm length: 238
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 314-593
Cow position:
Alignm length: 284
Alignm identity: 183
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 123, 0

Show alignments to all cow chromosomes.