Cow genome map

Conread name: Utr1-UTR010044B01

Conread position: 1-223
Cow position: chr17:11380534-11380303 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 102, 24

Conread position: 1-225
Cow position: chr17:5307142-5306910 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 98, 0

Conread position: 1-225
Cow position: chr17:11084822-11084591 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 0

Conread position: 1-260
Cow position: chr17:43453530-43453264 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 239

Conread position: 1-281
Cow position: chr17:14005975-14006264 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 211
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 98, 204

Conread position: 1-303
Cow position: chr17:28025484-28025176 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-321
Cow position: chr17:8211249-8211574 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 1-327
Cow position: chr17:20511097-20510781 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 228
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 41, 31

Conread position: 1-328
Cow position: chr17:14214441-14214113 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 237

Conread position: 1-328
Cow position: chr17:26830317-26829989 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-357
Cow position: chr17:5546792-5546430 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-374
Cow position: chr17:253416-253793 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 239

Conread position: 1-388
Cow position: chr17:2582876-2583265 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 160

Conread position: 1-403
Cow position: chr17:16897506-16897104 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 32

Conread position: 1-431
Cow position: chr17:18124343-18123912 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 222

Conread position: 1-432
Cow position: chr17:1705996-1706444 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 254

Conread position: 1-432
Cow position: chr17:36816262-36816683 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 88

Conread position: 1-451
Cow position: chr17:15718931-15719385 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-455
Cow position: chr17:38828508-38828956 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 239

Conread position: 1-473
Cow position: chr17:11785474-11785950 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 137

Conread position: 1-484
Cow position: chr17:14899311-14899799 (view UCSC Genome Browser custom track)
Alignm length: 494
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 243

Conread position: 1-497
Cow position: chr17:22107049-22106545 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 245

Conread position: 1-507
Cow position: chr17:1709136-1708629 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 55

Conread position: 1-507
Cow position: chr17:1712304-1711797 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 55

Conread position: 1-513
Cow position: chr17:23510856-23510334 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 52

Conread position: 1-514
Cow position: chr17:9073738-9074255 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-559
Cow position: chr17:13930486-13931048 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 160

Conread position: 1-587
Cow position: chr17:21067070-21066492 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 102

Conread position: 1-601
Cow position: chr17:24292225-24292830 (view UCSC Genome Browser custom track)
Alignm length: 613
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 242

Conread position: 1-681
Cow position: chr17:15140749-15140058 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 19

Conread position: 1-700
Cow position: chr17:14871267-14871983 (view UCSC Genome Browser custom track)
Alignm length: 726
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 125

Conread position: 1-740
Cow position: chr17:138201-138943 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-745
Cow position: chr17:40810338-40811089 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 125

Conread position: 1-747
Cow position: chr17:20642312-20643057 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 58

Conread position: 1-751
Cow position: chr17:15709405-15708640 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 577
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-764
Cow position: chr17:33290367-33289617 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 60

Conread position: 1-800
Cow position: chr17:3327718-3328503 (view UCSC Genome Browser custom track)
Alignm length: 820
Alignm identity: 496
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 109, 90

Conread position: 1-833
Cow position: chr17:22562744-22563586 (view UCSC Genome Browser custom track)
Alignm length: 859
Alignm identity: 633
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 30

Conread position: 1-840
Cow position: chr17:20085215-20084373 (view UCSC Genome Browser custom track)
Alignm length: 864
Alignm identity: 630
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 37

Conread position: 1-841
Cow position: chr17:1784958-1784113 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 630
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 244

Conread position: 1-841
Cow position: chr17:18100487-18099627 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-846
Cow position: chr17:16855502-16854647 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 15

Conread position: 1-848
Cow position: chr17:4062927-4063787 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 646
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 245

Conread position: 1-848
Cow position: chr17:13707343-13708154 (view UCSC Genome Browser custom track)
Alignm length: 864
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 62

Conread position: 1-849
Cow position: chr17:1882851-1883697 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 638
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 39

Conread position: 1-849
Cow position: chr17:2178462-2179285 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 579
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 181

Conread position: 1-849
Cow position: chr17:6071126-6071997 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 160

Conread position: 1-849
Cow position: chr17:15853317-15854190 (view UCSC Genome Browser custom track)
Alignm length: 880
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 235

Conread position: 1-850
Cow position: chr17:183736-184605 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 68

Conread position: 1-850
Cow position: chr17:452429-453298 (view UCSC Genome Browser custom track)
Alignm length: 888
Alignm identity: 646
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 68

Conread position: 1-850
Cow position: chr17:731896-731040 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 160

Conread position: 1-850
Cow position: chr17:2176573-2177428 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 641
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 37

Conread position: 1-850
Cow position: chr17:2245468-2244615 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 643
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 159

Conread position: 1-850
Cow position: chr17:2264782-2265646 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 244

Conread position: 1-850
Cow position: chr17:4481295-4480425 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-850
Cow position: chr17:6122367-6123241 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 241

Conread position: 1-850
Cow position: chr17:6262444-6263312 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 244

Conread position: 1-850
Cow position: chr17:8222283-8223164 (view UCSC Genome Browser custom track)
Alignm length: 885
Alignm identity: 672
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 243

Conread position: 1-850
Cow position: chr17:14242421-14243290 (view UCSC Genome Browser custom track)
Alignm length: 882
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 242

Conread position: 1-850
Cow position: chr17:14250512-14249651 (view UCSC Genome Browser custom track)
Alignm length: 880
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 8

Conread position: 1-850
Cow position: chr17:15327870-15328738 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 13

Conread position: 1-850
Cow position: chr17:15438393-15439249 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 128

Conread position: 1-850
Cow position: chr17:15808568-15809446 (view UCSC Genome Browser custom track)
Alignm length: 883
Alignm identity: 650
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 245

Conread position: 1-850
Cow position: chr17:16870671-16869841 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 648
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 232

Conread position: 1-850
Cow position: chr17:20390362-20391232 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position: chr17:22249662-22248794 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 174

Conread position: 1-850
Cow position: chr17:24027401-24026528 (view UCSC Genome Browser custom track)
Alignm length: 882
Alignm identity: 677
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 244

Conread position: 1-850
Cow position: chr17:24784783-24785648 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 241

Conread position: 1-850
Cow position: chr17:25738892-25739754 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 135

Conread position: 1-850
Cow position: chr17:27792186-27791334 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-850
Cow position: chr17:29825373-29824502 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 674
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr17:43991073-43991942 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 649
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 240

Conread position: 2-387
Cow position: chr17:4569841-4570220 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 133

Conread position: 2-691
Cow position: chr17:10270756-10270068 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 160

Conread position: 2-840
Cow position: chr17:1655157-1654316 (view UCSC Genome Browser custom track)
Alignm length: 862
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 17

Conread position: 2-850
Cow position: chr17:15374001-15374840 (view UCSC Genome Browser custom track)
Alignm length: 863
Alignm identity: 632
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 234

Conread position: 2-850
Cow position: chr17:19215806-19214952 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 238

Conread position: 5-436
Cow position: chr17:3401264-3401697 (view UCSC Genome Browser custom track)
Alignm length: 443
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 10

Conread position: 5-583
Cow position: chr17:33935245-33934664 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 227

Conread position: 5-847
Cow position: chr17:4210522-4211387 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 27

Conread position: 5-850
Cow position: chr17:20094568-20093707 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 11

Conread position: 6-850
Cow position: chr17:2838624-2839470 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 606
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 238

Conread position: 7-254
Cow position: chr17:3709535-3709283 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 92, 232

Conread position: 7-322
Cow position: chr17:12674852-12674533 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 237

Conread position: 7-839
Cow position: chr17:8204527-8205381 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 619
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 132

Conread position: 8-584
Cow position: chr17:20090051-20089493 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 372
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 166, 11

Conread position: 10-293
Cow position: chr17:19789829-19790117 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 59, 148

Conread position: 10-850
Cow position: chr17:14029755-14028889 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 237

Conread position: 11-740
Cow position: chr17:1312158-1311422 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 45

Conread position: 11-757
Cow position: chr17:4084670-4085422 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 114

Conread position: 12-813
Cow position: chr17:21770279-21771101 (view UCSC Genome Browser custom track)
Alignm length: 828
Alignm identity: 626
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 8

Conread position: 12-846
Cow position: chr17:20694799-20695636 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 224

Conread position: 15-843
Cow position: chr17:18785041-18785856 (view UCSC Genome Browser custom track)
Alignm length: 859
Alignm identity: 534
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 73, 45

Conread position: 16-526
Cow position: chr17:603307-602805 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 26

Conread position: 17-850
Cow position: chr17:29155990-29156839 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 224

Conread position: 18-850
Cow position: chr17:1969757-1970609 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 132

Conread position: 19-765
Cow position: chr17:17132957-17133696 (view UCSC Genome Browser custom track)
Alignm length: 757
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 126

Conread position: 20-735
Cow position: chr17:29949825-29950548 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 202

Conread position: 32-587
Cow position: chr17:2032829-2033368 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 23

Conread position: 33-850
Cow position: chr17:1569578-1568764 (view UCSC Genome Browser custom track)
Alignm length: 837
Alignm identity: 626
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 67

Conread position: 34-847
Cow position: chr17:27977742-27978557 (view UCSC Genome Browser custom track)
Alignm length: 845
Alignm identity: 619
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 201

Conread position: 35-349
Cow position: chr17:32408015-32407711 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 67, 129

Conread position: 35-848
Cow position: chr17:1457758-1456924 (view UCSC Genome Browser custom track)
Alignm length: 846
Alignm identity: 605
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 87

Conread position: 35-850
Cow position: chr17:20545759-20546595 (view UCSC Genome Browser custom track)
Alignm length: 843
Alignm identity: 642
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 20

Conread position: 37-843
Cow position: chr17:22500024-22500837 (view UCSC Genome Browser custom track)
Alignm length: 834
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 116

Conread position: 59-460
Cow position: chr17:3780110-3780509 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 40

Conread position: 62-850
Cow position: chr17:147570-148366 (view UCSC Genome Browser custom track)
Alignm length: 812
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 177

Conread position: 65-288
Cow position: chr17:3305033-3305257 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 43, 95

Conread position: 75-850
Cow position: chr17:16118780-16118013 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 129

Conread position: 76-353
Cow position: chr17:9745618-9745896 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 23, 159

Conread position: 77-499
Cow position: chr17:18722214-18721787 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 61

Conread position: 96-735
Cow position: chr17:5043901-5043257 (view UCSC Genome Browser custom track)
Alignm length: 657
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 56

Conread position: 102-451
Cow position: chr17:13674817-13674463 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 53

Conread position: 103-791
Cow position: chr17:30182887-30182185 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 133

Conread position: 103-835
Cow position: chr17:17127688-17128446 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 139

Conread position: 131-449
Cow position: chr17:23722343-23722654 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 214
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 56, 93

Conread position: 132-850
Cow position: chr17:15117540-15118274 (view UCSC Genome Browser custom track)
Alignm length: 739
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 103

Conread position: 137-509
Cow position: chr17:14239797-14240171 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 97

Conread position: 148-442
Cow position: chr17:8994307-8994602 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 92

Conread position: 148-838
Cow position: chr17:22774702-22774018 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 58

Conread position: 164-700
Cow position: chr17:15307621-15307117 (view UCSC Genome Browser custom track)
Alignm length: 542
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 76

Conread position: 174-560
Cow position: chr17:44641701-44641317 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 62

Conread position: 181-473
Cow position: chr17:38917252-38916962 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 181-519
Cow position: chr17:9905718-9905366 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 237
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 211, 53

Conread position: 181-547
Cow position: chr17:15325459-15325096 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 181-841
Cow position: chr17:21766673-21767348 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 198-601
Cow position: chr17:15229238-15228840 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 14

Conread position: 208-328
Cow position: chr17:51267-51152 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 209-850
Cow position: chr17:37529168-37528514 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 27

Conread position: 230-414
Cow position: chr17:12669259-12669077 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 230-628
Cow position: chr17:30257-30647 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 17

Conread position: 235-850
Cow position: chr17:29212461-29213081 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 47

Conread position: 236-626
Cow position: chr17:11024727-11025129 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 273
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 100, 46

Conread position: 237-650
Cow position: chr17:43453224-43452804 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 21

Conread position: 239-802
Cow position: chr17:20033270-20033814 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 43

Conread position: 241-431
Cow position: chr17:23052966-23053156 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 92, 40

Conread position: 243-850
Cow position: chr17:34236416-34235793 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 39

Conread position: 245-850
Cow position: chr17:26829906-26829286 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 38

Conread position: 250-543
Cow position: chr17:11381158-11381448 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 32

Conread position: 263-850
Cow position: chr17:19369300-19369906 (view UCSC Genome Browser custom track)
Alignm length: 614
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 21

Conread position: 283-850
Cow position: chr17:29079255-29079804 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 102

Conread position: 292-527
Cow position: chr17:43231285-43231048 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 314-593
Cow position: chr17:4941305-4941022 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 183
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 123, 0

Show alignments to all cow chromosomes.