Cow genome map

Conread name: Utr1-UTR010044B01

Conread position: 1-224
Cow position:
Alignm length: 232
Alignm identity: 177
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 98, 0

Conread position: 1-225
Cow position:
Alignm length: 234
Alignm identity: 162
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 98, 80

Conread position: 1-225
Cow position:
Alignm length: 229
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 74, 99

Conread position: 1-225
Cow position:
Alignm length: 233
Alignm identity: 174
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 98, 0

Conread position: 1-267
Cow position:
Alignm length: 280
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 245

Conread position: 1-279
Cow position:
Alignm length: 287
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-293
Cow position:
Alignm length: 300
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 237

Conread position: 1-303
Cow position:
Alignm length: 311
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 237

Conread position: 1-322
Cow position:
Alignm length: 330
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-327
Cow position:
Alignm length: 346
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 244

Conread position: 1-347
Cow position:
Alignm length: 356
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-362
Cow position:
Alignm length: 369
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 1-395
Cow position:
Alignm length: 404
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-402
Cow position:
Alignm length: 411
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 243

Conread position: 1-409
Cow position:
Alignm length: 425
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 239

Conread position: 1-409
Cow position:
Alignm length: 435
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 278

Conread position: 1-414
Cow position:
Alignm length: 423
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-434
Cow position:
Alignm length: 452
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 298

Conread position: 1-449
Cow position:
Alignm length: 459
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 242

Conread position: 1-457
Cow position:
Alignm length: 474
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 54

Conread position: 1-459
Cow position:
Alignm length: 472
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 34

Conread position: 1-470
Cow position:
Alignm length: 478
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 242

Conread position: 1-503
Cow position:
Alignm length: 510
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 18

Conread position: 1-527
Cow position:
Alignm length: 537
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 237

Conread position: 1-547
Cow position:
Alignm length: 560
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-561
Cow position:
Alignm length: 570
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 160

Conread position: 1-584
Cow position:
Alignm length: 594
Alignm identity: 462
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 231

Conread position: 1-584
Cow position:
Alignm length: 602
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 168

Conread position: 1-627
Cow position:
Alignm length: 645
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 20

Conread position: 1-648
Cow position:
Alignm length: 657
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 236

Conread position: 1-748
Cow position:
Alignm length: 762
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 23

Conread position: 1-749
Cow position:
Alignm length: 766
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-838
Cow position:
Alignm length: 863
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 239

Conread position: 1-840
Cow position:
Alignm length: 863
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 237

Conread position: 1-841
Cow position:
Alignm length: 872
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 234

Conread position: 1-842
Cow position:
Alignm length: 872
Alignm identity: 640
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 124

Conread position: 1-846
Cow position:
Alignm length: 898
Alignm identity: 633
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 149

Conread position: 1-849
Cow position:
Alignm length: 872
Alignm identity: 653
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 241

Conread position: 1-850
Cow position:
Alignm length: 877
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 31

Conread position: 1-850
Cow position:
Alignm length: 883
Alignm identity: 643
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 234

Conread position: 1-850
Cow position:
Alignm length: 878
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 234

Conread position: 1-850
Cow position:
Alignm length: 872
Alignm identity: 635
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 36

Conread position: 1-850
Cow position:
Alignm length: 881
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 133

Conread position: 1-850
Cow position:
Alignm length: 883
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 231

Conread position: 1-850
Cow position:
Alignm length: 871
Alignm identity: 678
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 159

Conread position: 1-850
Cow position:
Alignm length: 878
Alignm identity: 621
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 181

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 637
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 54

Conread position: 1-850
Cow position:
Alignm length: 862
Alignm identity: 633
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 244

Conread position: 1-850
Cow position:
Alignm length: 866
Alignm identity: 630
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position:
Alignm length: 877
Alignm identity: 673
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 15

Conread position: 1-850
Cow position:
Alignm length: 872
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 235

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 137

Conread position: 1-850
Cow position:
Alignm length: 876
Alignm identity: 673
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-850
Cow position:
Alignm length: 874
Alignm identity: 650
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 238

Conread position: 1-850
Cow position:
Alignm length: 877
Alignm identity: 648
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 241

Conread position: 1-850
Cow position:
Alignm length: 876
Alignm identity: 675
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-850
Cow position:
Alignm length: 876
Alignm identity: 649
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 296

Conread position: 2-323
Cow position:
Alignm length: 331
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 238

Conread position: 2-409
Cow position:
Alignm length: 418
Alignm identity: 290
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 128, 31

Conread position: 2-466
Cow position:
Alignm length: 471
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 79

Conread position: 2-521
Cow position:
Alignm length: 529
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 99

Conread position: 2-629
Cow position:
Alignm length: 646
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 43

Conread position: 5-224
Cow position:
Alignm length: 229
Alignm identity: 176
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 95, 0

Conread position: 5-849
Cow position:
Alignm length: 874
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 58

Conread position: 5-850
Cow position:
Alignm length: 875
Alignm identity: 644
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 204

Conread position: 6-530
Cow position:
Alignm length: 539
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 232

Conread position: 6-850
Cow position:
Alignm length: 864
Alignm identity: 649
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 155

Conread position: 7-836
Cow position:
Alignm length: 855
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 224

Conread position: 7-848
Cow position:
Alignm length: 873
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 241

Conread position: 7-850
Cow position:
Alignm length: 868
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 237

Conread position: 10-386
Cow position:
Alignm length: 384
Alignm identity: 243
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 111

Conread position: 10-443
Cow position:
Alignm length: 450
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 233

Conread position: 10-584
Cow position:
Alignm length: 593
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 236

Conread position: 10-841
Cow position:
Alignm length: 858
Alignm identity: 593
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 139

Conread position: 10-848
Cow position:
Alignm length: 868
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 180

Conread position: 11-791
Cow position:
Alignm length: 797
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 226

Conread position: 11-848
Cow position:
Alignm length: 854
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 83

Conread position: 13-800
Cow position:
Alignm length: 827
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 222

Conread position: 28-848
Cow position:
Alignm length: 841
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 63

Conread position: 33-389
Cow position:
Alignm length: 366
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 206

Conread position: 33-524
Cow position:
Alignm length: 504
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 209

Conread position: 33-832
Cow position:
Alignm length: 825
Alignm identity: 627
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 211

Conread position: 34-446
Cow position:
Alignm length: 422
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 204

Conread position: 40-681
Cow position:
Alignm length: 659
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 204

Conread position: 42-812
Cow position:
Alignm length: 807
Alignm identity: 596
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 142

Conread position: 45-450
Cow position:
Alignm length: 415
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 16

Conread position: 46-293
Cow position:
Alignm length: 261
Alignm identity: 181
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 53, 194

Conread position: 46-850
Cow position:
Alignm length: 831
Alignm identity: 638
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 193

Conread position: 59-303
Cow position:
Alignm length: 252
Alignm identity: 181
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 39, 179

Conread position: 59-423
Cow position:
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 237

Conread position: 59-850
Cow position:
Alignm length: 814
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 175

Conread position: 60-850
Cow position:
Alignm length: 827
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 186

Conread position: 77-225
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 79-310
Cow position:
Alignm length: 240
Alignm identity: 174
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 165

Conread position: 81-850
Cow position:
Alignm length: 797
Alignm identity: 606
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 160

Conread position: 85-850
Cow position:
Alignm length: 788
Alignm identity: 602
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 151

Conread position: 86-438
Cow position:
Alignm length: 360
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 151

Conread position: 90-847
Cow position:
Alignm length: 776
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 39

Conread position: 95-850
Cow position:
Alignm length: 781
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 69

Conread position: 102-495
Cow position:
Alignm length: 400
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 19

Conread position: 103-477
Cow position:
Alignm length: 386
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 124

Conread position: 107-850
Cow position:
Alignm length: 765
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 133

Conread position: 123-584
Cow position:
Alignm length: 468
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 112

Conread position: 124-846
Cow position:
Alignm length: 749
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 21

Conread position: 131-840
Cow position:
Alignm length: 725
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 26

Conread position: 138-848
Cow position:
Alignm length: 727
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 99

Conread position: 149-827
Cow position:
Alignm length: 694
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 91

Conread position: 162-850
Cow position:
Alignm length: 710
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 73

Conread position: 181-428
Cow position:
Alignm length: 249
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 181-850
Cow position:
Alignm length: 681
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 182-650
Cow position:
Alignm length: 479
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 57

Conread position: 185-461
Cow position:
Alignm length: 278
Alignm identity: 189
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 267, 19

Conread position: 194-503
Cow position:
Alignm length: 312
Alignm identity: 209
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 135, 33

Conread position: 197-775
Cow position:
Alignm length: 592
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 39

Conread position: 198-473
Cow position:
Alignm length: 284
Alignm identity: 198
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 135, 38

Conread position: 209-813
Cow position:
Alignm length: 622
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 24

Conread position: 210-513
Cow position:
Alignm length: 306
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 26

Conread position: 212-386
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 121, 24

Conread position: 214-526
Cow position:
Alignm length: 314
Alignm identity: 223
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 239, 13

Conread position: 235-843
Cow position:
Alignm length: 643
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 48

Conread position: 236-378
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 97, 57

Conread position: 236-747
Cow position:
Alignm length: 518
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 46

Conread position: 241-848
Cow position:
Alignm length: 636
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 41

Conread position: 241-850
Cow position:
Alignm length: 626
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 25

Conread position: 243-389
Cow position:
Alignm length: 148
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 93, 40

Conread position: 243-681
Cow position:
Alignm length: 450
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 34

Conread position: 248-636
Cow position:
Alignm length: 397
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 34

Conread position: 254-472
Cow position:
Alignm length: 221
Alignm identity: 169
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 79, 27

Conread position: 273-823
Cow position:
Alignm length: 568
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 10

Conread position: 281-749
Cow position:
Alignm length: 479
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 74

Conread position: 300-848
Cow position:
Alignm length: 571
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 59

Show alignments to all cow chromosomes.