Cow genome map

Conread name: Utr1-UTR010044B01

Conread position: 1-225
Cow position: chr2:5594861-5595086 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 165, 22

Conread position: 1-225
Cow position: chr2:36579202-36578970 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 1-225
Cow position: chr2:49463178-49463400 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 100, 13

Conread position: 1-261
Cow position: chr2:2456237-2455972 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 200
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 98, 238

Conread position: 1-261
Cow position: chr2:41953056-41953325 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 201
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 100, 18

Conread position: 1-276
Cow position: chr2:12203062-12203342 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-284
Cow position: chr2:31733254-31732973 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 201
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 98, 19

Conread position: 1-288
Cow position: chr2:9956809-9956514 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 1-288
Cow position: chr2:30379272-30379565 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 244

Conread position: 1-294
Cow position: chr2:44477871-44478163 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 65

Conread position: 1-296
Cow position: chr2:1285798-1286088 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 80, 13

Conread position: 1-309
Cow position: chr2:2209916-2209605 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-309
Cow position: chr2:2213740-2213429 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-310
Cow position: chr2:13602484-13602797 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 221
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 98, 237

Conread position: 1-324
Cow position: chr2:24927675-24928000 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 34

Conread position: 1-324
Cow position: chr2:45212423-45212098 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 18

Conread position: 1-351
Cow position: chr2:31417363-31417712 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 96

Conread position: 1-354
Cow position: chr2:50406240-50406594 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 250
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 84, 92

Conread position: 1-362
Cow position: chr2:52160614-52160261 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 240

Conread position: 1-398
Cow position: chr2:32862362-32861965 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 239

Conread position: 1-415
Cow position: chr2:24436936-24436524 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 124

Conread position: 1-421
Cow position: chr2:9910255-9910680 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 242

Conread position: 1-424
Cow position: chr2:68381332-68381756 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 160

Conread position: 1-425
Cow position: chr2:81259387-81259816 (view UCSC Genome Browser custom track)
Alignm length: 435
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 244

Conread position: 1-433
Cow position: chr2:4834341-4833904 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 1-440
Cow position: chr2:46940450-46940890 (view UCSC Genome Browser custom track)
Alignm length: 452
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 250

Conread position: 1-477
Cow position: chr2:16321189-16321666 (view UCSC Genome Browser custom track)
Alignm length: 489
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 254

Conread position: 1-507
Cow position: chr2:38512626-38512114 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-518
Cow position: chr2:5979276-5979789 (view UCSC Genome Browser custom track)
Alignm length: 534
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 162

Conread position: 1-519
Cow position: chr2:10739584-10739065 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-526
Cow position: chr2:78748553-78749079 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 247

Conread position: 1-538
Cow position: chr2:312229-311682 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 296

Conread position: 1-561
Cow position: chr2:15964414-15963848 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-569
Cow position: chr2:65935984-65935399 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 242

Conread position: 1-582
Cow position: chr2:16303869-16304440 (view UCSC Genome Browser custom track)
Alignm length: 586
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 89

Conread position: 1-584
Cow position: chr2:10467860-10468447 (view UCSC Genome Browser custom track)
Alignm length: 592
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 239

Conread position: 1-584
Cow position: chr2:16306341-16306914 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 21

Conread position: 1-584
Cow position: chr2:34490683-34491258 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 80

Conread position: 1-584
Cow position: chr2:51024903-51024332 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 235

Conread position: 1-589
Cow position: chr2:25590533-25591120 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 243

Conread position: 1-592
Cow position: chr2:23643105-23642508 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-603
Cow position: chr2:43757378-43756767 (view UCSC Genome Browser custom track)
Alignm length: 616
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 235

Conread position: 1-605
Cow position: chr2:54346377-54346984 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 235

Conread position: 1-623
Cow position: chr2:44988141-44987526 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 60

Conread position: 1-624
Cow position: chr2:1844810-1844198 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-624
Cow position: chr2:40248883-40249527 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 108

Conread position: 1-625
Cow position: chr2:72791314-72790679 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 241

Conread position: 1-632
Cow position: chr2:6965193-6965824 (view UCSC Genome Browser custom track)
Alignm length: 640
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 22

Conread position: 1-632
Cow position: chr2:63000186-63000829 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 489
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 128

Conread position: 1-636
Cow position: chr2:39424192-39424836 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 239

Conread position: 1-647
Cow position: chr2:28654857-28655513 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 244

Conread position: 1-668
Cow position: chr2:31644495-31645177 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 244

Conread position: 1-669
Cow position: chr2:47036130-47035462 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 98

Conread position: 1-671
Cow position: chr2:52497814-52497138 (view UCSC Genome Browser custom track)
Alignm length: 681
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-697
Cow position: chr2:1693175-1693878 (view UCSC Genome Browser custom track)
Alignm length: 714
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 159

Conread position: 1-707
Cow position: chr2:39118863-39119583 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 556
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-720
Cow position: chr2:53332064-53332798 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 240

Conread position: 1-737
Cow position: chr2:41763529-41764269 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 231

Conread position: 1-737
Cow position: chr2:57053825-57054572 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-751
Cow position: chr2:34501393-34502157 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 581
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-770
Cow position: chr2:9962809-9962022 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-777
Cow position: chr2:72692038-72692825 (view UCSC Genome Browser custom track)
Alignm length: 797
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 239

Conread position: 1-784
Cow position: chr2:53662772-53663565 (view UCSC Genome Browser custom track)
Alignm length: 809
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 63

Conread position: 1-790
Cow position: chr2:20870631-20869842 (view UCSC Genome Browser custom track)
Alignm length: 802
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 139

Conread position: 1-800
Cow position: chr2:7369934-7370744 (view UCSC Genome Browser custom track)
Alignm length: 822
Alignm identity: 624
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 87

Conread position: 1-800
Cow position: chr2:25023360-25024187 (view UCSC Genome Browser custom track)
Alignm length: 839
Alignm identity: 627
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 136

Conread position: 1-801
Cow position: chr2:55481947-55481146 (view UCSC Genome Browser custom track)
Alignm length: 819
Alignm identity: 626
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 27

Conread position: 1-832
Cow position: chr2:279983-279138 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 653
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-833
Cow position: chr2:14208573-14207737 (view UCSC Genome Browser custom track)
Alignm length: 857
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 160

Conread position: 1-838
Cow position: chr2:20857307-20856478 (view UCSC Genome Browser custom track)
Alignm length: 862
Alignm identity: 612
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 19

Conread position: 1-841
Cow position: chr2:20917905-20917069 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 13

Conread position: 1-841
Cow position: chr2:21982496-21981635 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 244

Conread position: 1-843
Cow position: chr2:11153721-11152857 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 606
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 160

Conread position: 1-843
Cow position: chr2:49301759-49300892 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 642
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 149

Conread position: 1-843
Cow position: chr2:63068617-63067749 (view UCSC Genome Browser custom track)
Alignm length: 880
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 199

Conread position: 1-843
Cow position: chr2:67188559-67187721 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 632
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 31

Conread position: 1-846
Cow position: chr2:4018319-4017491 (view UCSC Genome Browser custom track)
Alignm length: 859
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 39

Conread position: 1-848
Cow position: chr2:5116207-5117067 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 658
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 240

Conread position: 1-848
Cow position: chr2:10197003-10196150 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 141

Conread position: 1-848
Cow position: chr2:35358273-35359119 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 242

Conread position: 1-849
Cow position: chr2:10263146-10262280 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 1-850
Cow position: chr2:383858-382992 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 621
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 169

Conread position: 1-850
Cow position: chr2:779158-778323 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 620
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 100

Conread position: 1-850
Cow position: chr2:1187604-1186725 (view UCSC Genome Browser custom track)
Alignm length: 884
Alignm identity: 675
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position: chr2:1200558-1199720 (view UCSC Genome Browser custom track)
Alignm length: 864
Alignm identity: 638
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 182

Conread position: 1-850
Cow position: chr2:2182008-2181144 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 644
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 169

Conread position: 1-850
Cow position: chr2:2410580-2409714 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr2:2602938-2603793 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 123

Conread position: 1-850
Cow position: chr2:3622783-3623653 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 149

Conread position: 1-850
Cow position: chr2:3668323-3669191 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 137

Conread position: 1-850
Cow position: chr2:4180853-4179986 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 240

Conread position: 1-850
Cow position: chr2:4741626-4742495 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 241

Conread position: 1-850
Cow position: chr2:4805473-4804608 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 129

Conread position: 1-850
Cow position: chr2:4917806-4916926 (view UCSC Genome Browser custom track)
Alignm length: 887
Alignm identity: 675
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 39

Conread position: 1-850
Cow position: chr2:5997099-5997959 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 653
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 29

Conread position: 1-850
Cow position: chr2:6004572-6003691 (view UCSC Genome Browser custom track)
Alignm length: 889
Alignm identity: 646
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 32

Conread position: 1-850
Cow position: chr2:8120963-8121828 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 103

Conread position: 1-850
Cow position: chr2:8528947-8529802 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr2:10183967-10183101 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position: chr2:10609519-10608665 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 63

Conread position: 1-850
Cow position: chr2:11814288-11813418 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 140

Conread position: 1-850
Cow position: chr2:12222021-12221164 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 238

Conread position: 1-850
Cow position: chr2:12285472-12286325 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 650
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 134

Conread position: 1-850
Cow position: chr2:12595239-12596069 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 643
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 238

Conread position: 1-850
Cow position: chr2:12695418-12694541 (view UCSC Genome Browser custom track)
Alignm length: 890
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 244

Conread position: 1-850
Cow position: chr2:13067742-13066877 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 236

Conread position: 1-850
Cow position: chr2:13727309-13726500 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 9

Conread position: 1-850
Cow position: chr2:16327662-16326803 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 233

Conread position: 1-850
Cow position: chr2:25886293-25885420 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 673
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position: chr2:28796106-28796981 (view UCSC Genome Browser custom track)
Alignm length: 882
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position: chr2:29956805-29955954 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 1-850
Cow position: chr2:31408084-31407214 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr2:33081501-33080653 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 649
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 71

Conread position: 1-850
Cow position: chr2:36048039-36047191 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 646
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 193

Conread position: 1-850
Cow position: chr2:36982916-36983783 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 670
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 54

Conread position: 1-850
Cow position: chr2:37324148-37325016 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 217

Conread position: 1-850
Cow position: chr2:42668445-42667576 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-850
Cow position: chr2:44093628-44094495 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 1-850
Cow position: chr2:44188703-44189536 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 645
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 234

Conread position: 1-850
Cow position: chr2:44932765-44931886 (view UCSC Genome Browser custom track)
Alignm length: 896
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 68

Conread position: 1-850
Cow position: chr2:45918508-45917636 (view UCSC Genome Browser custom track)
Alignm length: 880
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-850
Cow position: chr2:45937460-45936615 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 220

Conread position: 1-850
Cow position: chr2:46183273-46182404 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 673
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 65

Conread position: 1-850
Cow position: chr2:47182486-47181617 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 160

Conread position: 1-850
Cow position: chr2:48850985-48850111 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 290

Conread position: 1-850
Cow position: chr2:50060735-50059866 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr2:50079824-50080695 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 239

Conread position: 1-850
Cow position: chr2:50980893-50980041 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 240

Conread position: 1-850
Cow position: chr2:52621039-52621906 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 137

Conread position: 1-850
Cow position: chr2:53003940-53003083 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 680
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 160

Conread position: 1-850
Cow position: chr2:53542199-53543070 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 670
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 245

Conread position: 1-850
Cow position: chr2:54739745-54740598 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-850
Cow position: chr2:57338221-57339073 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 53

Conread position: 1-850
Cow position: chr2:57937659-57938526 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 658
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-850
Cow position: chr2:59411478-59410625 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 151

Conread position: 1-850
Cow position: chr2:62730787-62731655 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 238

Conread position: 1-850
Cow position: chr2:62734432-62735300 (view UCSC Genome Browser custom track)
Alignm length: 880
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 248

Conread position: 1-850
Cow position: chr2:63289665-63288787 (view UCSC Genome Browser custom track)
Alignm length: 894
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 247

Conread position: 1-850
Cow position: chr2:72931820-72930961 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 78

Conread position: 1-850
Cow position: chr2:74238402-74237534 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 685
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr2:74860231-74861076 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 602
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 13

Conread position: 1-850
Cow position: chr2:77858590-77859449 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 244

Conread position: 1-850
Cow position: chr2:78764919-78765776 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 655
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 192

Conread position: 2-248
Cow position: chr2:32433069-32432820 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 193
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 97, 43

Conread position: 2-446
Cow position: chr2:29968248-29968697 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 242

Conread position: 2-569
Cow position: chr2:71165255-71164684 (view UCSC Genome Browser custom track)
Alignm length: 582
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 165

Conread position: 5-273
Cow position: chr2:60617427-60617155 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 233

Conread position: 5-409
Cow position: chr2:36075562-36075158 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 296
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 38, 192

Conread position: 5-450
Cow position: chr2:18063138-18062706 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 183

Conread position: 5-501
Cow position: chr2:34572724-34573230 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 202

Conread position: 5-525
Cow position: chr2:38082850-38082340 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 41

Conread position: 5-596
Cow position: chr2:43876993-43877582 (view UCSC Genome Browser custom track)
Alignm length: 605
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 16

Conread position: 5-646
Cow position: chr2:49452223-49451579 (view UCSC Genome Browser custom track)
Alignm length: 653
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 228

Conread position: 5-698
Cow position: chr2:62051673-62050981 (view UCSC Genome Browser custom track)
Alignm length: 713
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 236

Conread position: 5-791
Cow position: chr2:39676496-39675687 (view UCSC Genome Browser custom track)
Alignm length: 819
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 235

Conread position: 5-837
Cow position: chr2:6750512-6749710 (view UCSC Genome Browser custom track)
Alignm length: 852
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 160

Conread position: 5-846
Cow position: chr2:41156442-41157307 (view UCSC Genome Browser custom track)
Alignm length: 880
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 18

Conread position: 5-848
Cow position: chr2:62675739-62674873 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 142

Conread position: 5-850
Cow position: chr2:3839531-3840365 (view UCSC Genome Browser custom track)
Alignm length: 859
Alignm identity: 650
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 119

Conread position: 5-850
Cow position: chr2:5868043-5867194 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 37

Conread position: 5-850
Cow position: chr2:22080177-22081034 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 233

Conread position: 5-850
Cow position: chr2:24876918-24876072 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 639
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 48

Conread position: 6-850
Cow position: chr2:12184043-12184888 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 635
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 168

Conread position: 6-850
Cow position: chr2:28647357-28646495 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 658
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 129

Conread position: 7-319
Cow position: chr2:41046981-41046669 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 228

Conread position: 7-442
Cow position: chr2:53183034-53183473 (view UCSC Genome Browser custom track)
Alignm length: 445
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 122

Conread position: 7-843
Cow position: chr2:49629593-49630447 (view UCSC Genome Browser custom track)
Alignm length: 863
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 232

Conread position: 7-848
Cow position: chr2:17266162-17265306 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 152

Conread position: 7-850
Cow position: chr2:7905214-7906065 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 648
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 154

Conread position: 7-850
Cow position: chr2:24687946-24688811 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 238

Conread position: 7-850
Cow position: chr2:26905518-26906372 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 655
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 232

Conread position: 8-584
Cow position: chr2:80289430-80288850 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 52

Conread position: 10-224
Cow position: chr2:56754230-56754016 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 89, 65

Conread position: 10-275
Cow position: chr2:17808264-17807994 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 229

Conread position: 10-471
Cow position: chr2:22134413-22133956 (view UCSC Genome Browser custom track)
Alignm length: 470
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 82

Conread position: 10-848
Cow position: chr2:816749-817569 (view UCSC Genome Browser custom track)
Alignm length: 854
Alignm identity: 609
Alignm E-value: 0
Alignm gaps (pig, cow): 112, 64

Conread position: 10-850
Cow position: chr2:11725646-11726504 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 230

Conread position: 10-850
Cow position: chr2:80162735-80161889 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 229

Conread position: 11-850
Cow position: chr2:9713941-9714792 (view UCSC Genome Browser custom track)
Alignm length: 864
Alignm identity: 653
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 9

Conread position: 12-443
Cow position: chr2:1992712-1993142 (view UCSC Genome Browser custom track)
Alignm length: 438
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 69

Conread position: 12-846
Cow position: chr2:54715715-54716565 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 632
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 150

Conread position: 16-449
Cow position: chr2:36883389-36882956 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 294
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 20, 229

Conread position: 18-446
Cow position: chr2:28724877-28725297 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 31

Conread position: 19-708
Cow position: chr2:20351676-20350997 (view UCSC Genome Browser custom track)
Alignm length: 703
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 222

Conread position: 23-473
Cow position: chr2:4931871-4931402 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 129

Conread position: 23-850
Cow position: chr2:10741855-10741022 (view UCSC Genome Browser custom track)
Alignm length: 848
Alignm identity: 639
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 102

Conread position: 24-850
Cow position: chr2:29218271-29219093 (view UCSC Genome Browser custom track)
Alignm length: 852
Alignm identity: 637
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 139

Conread position: 25-850
Cow position: chr2:37395665-37396510 (view UCSC Genome Browser custom track)
Alignm length: 851
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 219

Conread position: 30-269
Cow position: chr2:56831750-56831503 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 69, 208

Conread position: 32-473
Cow position: chr2:74469765-74469312 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 207

Conread position: 33-510
Cow position: chr2:2205521-2205066 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 320
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 69, 33

Conread position: 33-594
Cow position: chr2:45914373-45913820 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 155

Conread position: 35-850
Cow position: chr2:70669005-70669838 (view UCSC Genome Browser custom track)
Alignm length: 838
Alignm identity: 634
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 209

Conread position: 38-850
Cow position: chr2:16072851-16072050 (view UCSC Genome Browser custom track)
Alignm length: 826
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 217

Conread position: 45-850
Cow position: chr2:25742961-25742141 (view UCSC Genome Browser custom track)
Alignm length: 830
Alignm identity: 621
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 171

Conread position: 52-850
Cow position: chr2:10971392-10972201 (view UCSC Genome Browser custom track)
Alignm length: 821
Alignm identity: 613
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 184

Conread position: 55-300
Cow position: chr2:2085556-2085305 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 180
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 44, 186

Conread position: 55-721
Cow position: chr2:34593206-34592553 (view UCSC Genome Browser custom track)
Alignm length: 676
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 117

Conread position: 55-834
Cow position: chr2:62682980-62683781 (view UCSC Genome Browser custom track)
Alignm length: 809
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 26

Conread position: 55-850
Cow position: chr2:2096492-2095678 (view UCSC Genome Browser custom track)
Alignm length: 824
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 186

Conread position: 55-850
Cow position: chr2:18351084-18350267 (view UCSC Genome Browser custom track)
Alignm length: 822
Alignm identity: 620
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 189

Conread position: 56-327
Cow position: chr2:71470321-71470043 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 199
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 37, 192

Conread position: 56-751
Cow position: chr2:80876041-80875334 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 94

Conread position: 58-383
Cow position: chr2:35440280-35440612 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 231
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 45, 9

Conread position: 60-850
Cow position: chr2:15569753-15568963 (view UCSC Genome Browser custom track)
Alignm length: 809
Alignm identity: 574
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 91

Conread position: 61-839
Cow position: chr2:33389765-33390508 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 565
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 111

Conread position: 61-850
Cow position: chr2:70499303-70498509 (view UCSC Genome Browser custom track)
Alignm length: 807
Alignm identity: 613
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 175

Conread position: 65-463
Cow position: chr2:6949293-6949692 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 266
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 116, 27

Conread position: 69-473
Cow position: chr2:34619182-34619583 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 34

Conread position: 72-584
Cow position: chr2:70259461-70259978 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 161

Conread position: 76-751
Cow position: chr2:10123713-10123023 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 163

Conread position: 76-848
Cow position: chr2:51479513-51480299 (view UCSC Genome Browser custom track)
Alignm length: 796
Alignm identity: 594
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 65

Conread position: 86-850
Cow position: chr2:4451703-4450919 (view UCSC Genome Browser custom track)
Alignm length: 792
Alignm identity: 594
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 78

Conread position: 93-751
Cow position: chr2:43526485-43525834 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 64

Conread position: 102-472
Cow position: chr2:34665676-34665288 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 251
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 47

Conread position: 102-842
Cow position: chr2:35884107-35883346 (view UCSC Genome Browser custom track)
Alignm length: 766
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 133

Conread position: 110-850
Cow position: chr2:32658833-32659561 (view UCSC Genome Browser custom track)
Alignm length: 761
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 121

Conread position: 115-375
Cow position: chr2:21177446-21177707 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 66, 120

Conread position: 121-850
Cow position: chr2:18021528-18020782 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 114

Conread position: 121-850
Cow position: chr2:49474287-49475032 (view UCSC Genome Browser custom track)
Alignm length: 751
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 13

Conread position: 126-423
Cow position: chr2:9174877-9174604 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 205
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 131-848
Cow position: chr2:54698927-54699650 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 103

Conread position: 131-850
Cow position: chr2:72940354-72939623 (view UCSC Genome Browser custom track)
Alignm length: 741
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 104

Conread position: 133-413
Cow position: chr2:39935325-39935606 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 107

Conread position: 136-850
Cow position: chr2:52128920-52128206 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 534
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 95

Conread position: 140-850
Cow position: chr2:4238134-4237417 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 96

Conread position: 148-735
Cow position: chr2:5916700-5917284 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 87

Conread position: 150-578
Cow position: chr2:44230338-44229909 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 81

Conread position: 150-711
Cow position: chr2:25978474-25979043 (view UCSC Genome Browser custom track)
Alignm length: 575
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 85

Conread position: 156-843
Cow position: chr2:30923886-30924601 (view UCSC Genome Browser custom track)
Alignm length: 721
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 104

Conread position: 176-467
Cow position: chr2:6882747-6883035 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 213
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 157, 7

Conread position: 178-850
Cow position: chr2:31456184-31456859 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 23

Conread position: 179-850
Cow position: chr2:72016262-72016946 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 52

Conread position: 181-395
Cow position: chr2:30941024-30941238 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 107, 46

Conread position: 181-609
Cow position: chr2:20279203-20278771 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 181-800
Cow position: chr2:38486825-38487454 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 181-846
Cow position: chr2:4417602-4416942 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 509
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 44

Conread position: 181-848
Cow position: chr2:41161705-41162374 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 19

Conread position: 181-850
Cow position: chr2:28847023-28847703 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 47

Conread position: 182-850
Cow position: chr2:19213312-19212675 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 54

Conread position: 190-848
Cow position: chr2:37810068-37809398 (view UCSC Genome Browser custom track)
Alignm length: 686
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 39

Conread position: 191-578
Cow position: chr2:2772186-2772574 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 42

Conread position: 195-717
Cow position: chr2:35302920-35303435 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 355
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 36

Conread position: 195-850
Cow position: chr2:9688837-9688174 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 33

Conread position: 195-850
Cow position: chr2:16753426-16752767 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 41

Conread position: 195-850
Cow position: chr2:53556629-53557295 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 41

Conread position: 196-850
Cow position: chr2:4400666-4400000 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 40

Conread position: 197-585
Cow position: chr2:66901862-66901467 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 87

Conread position: 197-850
Cow position: chr2:36103935-36104612 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 29

Conread position: 198-848
Cow position: chr2:56206387-56205742 (view UCSC Genome Browser custom track)
Alignm length: 669
Alignm identity: 421
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 108, 28

Conread position: 199-850
Cow position: chr2:12752809-12752148 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 37

Conread position: 202-546
Cow position: chr2:42363929-42363592 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 34

Conread position: 205-551
Cow position: chr2:4224553-4224896 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 31

Conread position: 235-526
Cow position: chr2:34470340-34470057 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 214
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 85, 6

Conread position: 236-647
Cow position: chr2:15885433-15885018 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 236-848
Cow position: chr2:20895388-20894796 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 48

Conread position: 236-849
Cow position: chr2:32063227-32062610 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 236-850
Cow position: chr2:43209641-43210261 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 236-850
Cow position: chr2:51922063-51921436 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 241-730
Cow position: chr2:20977546-20978040 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 42

Conread position: 241-831
Cow position: chr2:16718397-16717791 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 41

Conread position: 241-850
Cow position: chr2:50564820-50565440 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 15

Conread position: 243-538
Cow position: chr2:66686500-66686204 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 39

Conread position: 243-849
Cow position: chr2:63890728-63890110 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 39

Conread position: 243-850
Cow position: chr2:18521306-18520691 (view UCSC Genome Browser custom track)
Alignm length: 619
Alignm identity: 475
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 39

Conread position: 243-850
Cow position: chr2:36910636-36910013 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 483
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 39

Conread position: 243-850
Cow position: chr2:53204619-53203994 (view UCSC Genome Browser custom track)
Alignm length: 627
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 49

Conread position: 248-848
Cow position: chr2:15060448-15059875 (view UCSC Genome Browser custom track)
Alignm length: 608
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 23

Conread position: 249-846
Cow position: chr2:1316641-1316031 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 395
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 84, 19

Conread position: 253-850
Cow position: chr2:77468672-77468083 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 451
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 29

Conread position: 257-627
Cow position: chr2:46351554-46351183 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 27

Conread position: 261-850
Cow position: chr2:74761406-74762010 (view UCSC Genome Browser custom track)
Alignm length: 609
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 22

Conread position: 264-503
Cow position: chr2:168612-168374 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 184
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 9, 29

Conread position: 287-850
Cow position: chr2:72534835-72535412 (view UCSC Genome Browser custom track)
Alignm length: 584
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 74

Conread position: 297-837
Cow position: chr2:82895554-82894993 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 502

Conread position: 302-850
Cow position: chr2:17119511-17118947 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 50

Show alignments to all cow chromosomes.