Cow genome map

Conread name: Utr1-UTR010044B01

Conread position: 1-230
Cow position: chr22:34171060-34171296 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 158

Conread position: 1-251
Cow position: chr22:32209361-32209614 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 197
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 100, 54

Conread position: 1-255
Cow position: chr22:18196995-18197254 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 194
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 98, 238

Conread position: 1-281
Cow position: chr22:11609360-11609647 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 240

Conread position: 1-288
Cow position: chr22:22934492-22934784 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-316
Cow position: chr22:1624568-1624886 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 98, 235

Conread position: 1-358
Cow position: chr22:1709703-1710065 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 54

Conread position: 1-366
Cow position: chr22:27513201-27513569 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 125

Conread position: 1-370
Cow position: chr22:20238115-20237741 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 233

Conread position: 1-371
Cow position: chr22:5931365-5930993 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 234

Conread position: 1-382
Cow position: chr22:44100622-44100236 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 241

Conread position: 1-391
Cow position: chr22:2390812-2390425 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 31

Conread position: 1-391
Cow position: chr22:44516494-44516109 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 93

Conread position: 1-402
Cow position: chr22:28556411-28556817 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 232

Conread position: 1-426
Cow position: chr22:36186351-36186767 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 137

Conread position: 1-432
Cow position: chr22:8487156-8486720 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-433
Cow position: chr22:44480236-44480675 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 248

Conread position: 1-440
Cow position: chr22:3297037-3296594 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 232

Conread position: 1-456
Cow position: chr22:44461107-44461541 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 92

Conread position: 1-457
Cow position: chr22:518645-518199 (view UCSC Genome Browser custom track)
Alignm length: 463
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 58

Conread position: 1-461
Cow position: chr22:44381741-44381275 (view UCSC Genome Browser custom track)
Alignm length: 471
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-473
Cow position: chr22:28713578-28714057 (view UCSC Genome Browser custom track)
Alignm length: 484
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-473
Cow position: chr22:32338040-32338517 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-473
Cow position: chr22:45014325-45013831 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 254

Conread position: 1-494
Cow position: chr22:10549449-10549947 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 244

Conread position: 1-523
Cow position: chr22:35668949-35668419 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 24

Conread position: 1-526
Cow position: chr22:35162934-35162410 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 174

Conread position: 1-542
Cow position: chr22:2040038-2040594 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 142

Conread position: 1-568
Cow position: chr22:34614760-34615329 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 124

Conread position: 1-579
Cow position: chr22:25725287-25724703 (view UCSC Genome Browser custom track)
Alignm length: 589
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-584
Cow position: chr22:44493980-44494547 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-613
Cow position: chr22:1483132-1483753 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 27

Conread position: 1-615
Cow position: chr22:324442-323830 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 68

Conread position: 1-630
Cow position: chr22:37269816-37270449 (view UCSC Genome Browser custom track)
Alignm length: 642
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 160

Conread position: 1-635
Cow position: chr22:557984-557340 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 56

Conread position: 1-635
Cow position: chr22:3714786-3714140 (view UCSC Genome Browser custom track)
Alignm length: 651
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-636
Cow position: chr22:42500646-42500002 (view UCSC Genome Browser custom track)
Alignm length: 654
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 244

Conread position: 1-651
Cow position: chr22:43235554-43236217 (view UCSC Genome Browser custom track)
Alignm length: 668
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-661
Cow position: chr22:46569376-46568699 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 242

Conread position: 1-728
Cow position: chr22:10601590-10602308 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 167

Conread position: 1-730
Cow position: chr22:26105420-26104679 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 161

Conread position: 1-749
Cow position: chr22:13775222-13775968 (view UCSC Genome Browser custom track)
Alignm length: 769
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 166

Conread position: 1-771
Cow position: chr22:41034443-41035202 (view UCSC Genome Browser custom track)
Alignm length: 789
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 119

Conread position: 1-775
Cow position: chr22:10577771-10576979 (view UCSC Genome Browser custom track)
Alignm length: 798
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-776
Cow position: chr22:42993891-42994680 (view UCSC Genome Browser custom track)
Alignm length: 798
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 168

Conread position: 1-800
Cow position: chr22:532811-533625 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 634
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-800
Cow position: chr22:5314955-5315775 (view UCSC Genome Browser custom track)
Alignm length: 828
Alignm identity: 635
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 238

Conread position: 1-812
Cow position: chr22:24818047-24817216 (view UCSC Genome Browser custom track)
Alignm length: 839
Alignm identity: 635
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 151

Conread position: 1-837
Cow position: chr22:9729255-9728422 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 641
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 124

Conread position: 1-841
Cow position: chr22:31315261-31316117 (view UCSC Genome Browser custom track)
Alignm length: 863
Alignm identity: 665
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-842
Cow position: chr22:21592140-21593002 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-842
Cow position: chr22:37291124-37290275 (view UCSC Genome Browser custom track)
Alignm length: 860
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 237

Conread position: 1-843
Cow position: chr22:13209106-13209965 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 615
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 16

Conread position: 1-848
Cow position: chr22:14822937-14822079 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 216

Conread position: 1-848
Cow position: chr22:48272281-48271438 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 602
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 143

Conread position: 1-849
Cow position: chr22:39465824-39464955 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position: chr22:539852-540722 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr22:1311200-1310355 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 632
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 13

Conread position: 1-850
Cow position: chr22:3275640-3274770 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 673
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 1-850
Cow position: chr22:3434246-3433376 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 677
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 232

Conread position: 1-850
Cow position: chr22:6339376-6340235 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 160

Conread position: 1-850
Cow position: chr22:6498973-6498155 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 634
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 149

Conread position: 1-850
Cow position: chr22:7155376-7156227 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 649
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 160

Conread position: 1-850
Cow position: chr22:9268918-9269786 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position: chr22:15013977-15013106 (view UCSC Genome Browser custom track)
Alignm length: 880
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-850
Cow position: chr22:15309246-15308375 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 675
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position: chr22:17325764-17324916 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 149

Conread position: 1-850
Cow position: chr22:18029992-18030810 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 617
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 51

Conread position: 1-850
Cow position: chr22:18808511-18807647 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 60

Conread position: 1-850
Cow position: chr22:18812192-18811327 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 60

Conread position: 1-850
Cow position: chr22:21193485-21192627 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 649
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 237

Conread position: 1-850
Cow position: chr22:27307247-27306377 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 237

Conread position: 1-850
Cow position: chr22:28784838-28785698 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 672
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 149

Conread position: 1-850
Cow position: chr22:29396822-29397667 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 65

Conread position: 1-850
Cow position: chr22:29854574-29855437 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 66

Conread position: 1-850
Cow position: chr22:31332154-31331285 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 242

Conread position: 1-850
Cow position: chr22:33952233-33951374 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 1-850
Cow position: chr22:34604931-34605756 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 618
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 158

Conread position: 1-850
Cow position: chr22:36858818-36857988 (view UCSC Genome Browser custom track)
Alignm length: 864
Alignm identity: 630
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 9

Conread position: 1-850
Cow position: chr22:44366493-44365623 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 672
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 241

Conread position: 1-850
Cow position: chr22:45280666-45281528 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 2-607
Cow position: chr22:3303936-3303338 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 464
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 237

Conread position: 2-850
Cow position: chr22:8339138-8339995 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 647
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 49

Conread position: 2-850
Cow position: chr22:22106766-22107629 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 146

Conread position: 5-288
Cow position: chr22:8595288-8594996 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 238

Conread position: 5-327
Cow position: chr22:11785345-11785019 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 234

Conread position: 5-391
Cow position: chr22:22029943-22030331 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 265
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 87, 226

Conread position: 5-431
Cow position: chr22:34822419-34821996 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 41

Conread position: 5-484
Cow position: chr22:3806342-3806830 (view UCSC Genome Browser custom track)
Alignm length: 492
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 274

Conread position: 5-538
Cow position: chr22:46524393-46524931 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 62

Conread position: 5-719
Cow position: chr22:12969676-12968957 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 52

Conread position: 5-781
Cow position: chr22:35904457-35903717 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 573
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 95

Conread position: 5-800
Cow position: chr22:40589113-40589947 (view UCSC Genome Browser custom track)
Alignm length: 841
Alignm identity: 623
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 35

Conread position: 5-821
Cow position: chr22:51237-52068 (view UCSC Genome Browser custom track)
Alignm length: 842
Alignm identity: 642
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 234

Conread position: 5-850
Cow position: chr22:5014806-5015666 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 648
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 241

Conread position: 6-449
Cow position: chr22:8118523-8118093 (view UCSC Genome Browser custom track)
Alignm length: 453
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 75

Conread position: 6-800
Cow position: chr22:29956478-29955670 (view UCSC Genome Browser custom track)
Alignm length: 822
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 238

Conread position: 6-827
Cow position: chr22:18604083-18603247 (view UCSC Genome Browser custom track)
Alignm length: 843
Alignm identity: 631
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 155

Conread position: 6-838
Cow position: chr22:19821908-19822766 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 646
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 237

Conread position: 7-473
Cow position: chr22:14629660-14629188 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 232

Conread position: 7-489
Cow position: chr22:981014-981502 (view UCSC Genome Browser custom track)
Alignm length: 493
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 226

Conread position: 7-849
Cow position: chr22:30676004-30675151 (view UCSC Genome Browser custom track)
Alignm length: 864
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 232

Conread position: 7-850
Cow position: chr22:696653-697519 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 238

Conread position: 7-850
Cow position: chr22:10907479-10906623 (view UCSC Genome Browser custom track)
Alignm length: 864
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 229

Conread position: 7-850
Cow position: chr22:46579003-46578120 (view UCSC Genome Browser custom track)
Alignm length: 898
Alignm identity: 638
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 25

Conread position: 8-850
Cow position: chr22:39473896-39473010 (view UCSC Genome Browser custom track)
Alignm length: 893
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 235

Conread position: 10-272
Cow position: chr22:5625040-5624773 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 229

Conread position: 10-432
Cow position: chr22:38552773-38553195 (view UCSC Genome Browser custom track)
Alignm length: 444
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 149

Conread position: 10-848
Cow position: chr22:26243119-26243943 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 150

Conread position: 11-374
Cow position: chr22:21364801-21364442 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 172, 123

Conread position: 11-699
Cow position: chr22:36584891-36584206 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 59

Conread position: 11-850
Cow position: chr22:1518300-1517454 (view UCSC Genome Browser custom track)
Alignm length: 858
Alignm identity: 641
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 90

Conread position: 11-850
Cow position: chr22:25968920-25968088 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 621
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 150

Conread position: 14-850
Cow position: chr22:19601071-19600214 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 650
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 225

Conread position: 18-440
Cow position: chr22:41472790-41472363 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 103

Conread position: 19-538
Cow position: chr22:22230341-22230865 (view UCSC Genome Browser custom track)
Alignm length: 532
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 153

Conread position: 19-757
Cow position: chr22:4227497-4226755 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 100

Conread position: 24-812
Cow position: chr22:47958505-47957727 (view UCSC Genome Browser custom track)
Alignm length: 808
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 162

Conread position: 24-850
Cow position: chr22:12728918-12728080 (view UCSC Genome Browser custom track)
Alignm length: 847
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 124

Conread position: 25-728
Cow position: chr22:11036248-11036932 (view UCSC Genome Browser custom track)
Alignm length: 715
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 34

Conread position: 25-850
Cow position: chr22:39902122-39902968 (view UCSC Genome Browser custom track)
Alignm length: 851
Alignm identity: 646
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 214

Conread position: 26-681
Cow position: chr22:21756145-21756785 (view UCSC Genome Browser custom track)
Alignm length: 667
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 157

Conread position: 28-310
Cow position: chr22:15867891-15868180 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 209
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 75, 262

Conread position: 30-288
Cow position: chr22:36544029-36543765 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 106, 209

Conread position: 37-850
Cow position: chr22:20570288-20569455 (view UCSC Genome Browser custom track)
Alignm length: 838
Alignm identity: 636
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 207

Conread position: 38-473
Cow position: chr22:23867728-23868168 (view UCSC Genome Browser custom track)
Alignm length: 446
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 36

Conread position: 39-850
Cow position: chr22:19140945-19140119 (view UCSC Genome Browser custom track)
Alignm length: 837
Alignm identity: 638
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 94

Conread position: 42-474
Cow position: chr22:1267291-1266861 (view UCSC Genome Browser custom track)
Alignm length: 441
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 13

Conread position: 48-795
Cow position: chr22:41946943-41946188 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 191

Conread position: 55-850
Cow position: chr22:22606928-22607745 (view UCSC Genome Browser custom track)
Alignm length: 822
Alignm identity: 632
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 190

Conread position: 63-850
Cow position: chr22:11768019-11767253 (view UCSC Genome Browser custom track)
Alignm length: 808
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 185

Conread position: 64-409
Cow position: chr22:34883482-34883837 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 233
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 35, 241

Conread position: 69-575
Cow position: chr22:24143675-24143158 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 14

Conread position: 74-684
Cow position: chr22:13184608-13185217 (view UCSC Genome Browser custom track)
Alignm length: 630
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 44

Conread position: 75-225
Cow position: chr22:29661571-29661729 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 75-770
Cow position: chr22:6722776-6722071 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 87

Conread position: 75-850
Cow position: chr22:40829278-40828480 (view UCSC Genome Browser custom track)
Alignm length: 803
Alignm identity: 601
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 164

Conread position: 82-850
Cow position: chr22:15954198-15953423 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 128

Conread position: 85-850
Cow position: chr22:32220272-32221028 (view UCSC Genome Browser custom track)
Alignm length: 778
Alignm identity: 548
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 70

Conread position: 94-584
Cow position: chr22:3254807-3254300 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 138

Conread position: 95-445
Cow position: chr22:34749379-34749720 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 249
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 113

Conread position: 96-513
Cow position: chr22:46586812-46587231 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 139

Conread position: 102-302
Cow position: chr22:17782248-17782048 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 128

Conread position: 103-310
Cow position: chr22:8299054-8299262 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 27, 133

Conread position: 103-473
Cow position: chr22:45893590-45893962 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 137

Conread position: 103-533
Cow position: chr22:45353646-45354073 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 133

Conread position: 108-844
Cow position: chr22:41408628-41407892 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 127

Conread position: 109-840
Cow position: chr22:37536470-37535750 (view UCSC Genome Browser custom track)
Alignm length: 760
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 126

Conread position: 109-850
Cow position: chr22:41846742-41845982 (view UCSC Genome Browser custom track)
Alignm length: 770
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 43

Conread position: 113-419
Cow position: chr22:16144259-16144566 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 127

Conread position: 116-850
Cow position: chr22:11754794-11754066 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 124

Conread position: 121-643
Cow position: chr22:18194551-18195067 (view UCSC Genome Browser custom track)
Alignm length: 535
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 20

Conread position: 124-799
Cow position: chr22:25340000-25340680 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 106

Conread position: 131-439
Cow position: chr22:36565293-36564985 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 77

Conread position: 131-451
Cow position: chr22:36541423-36541105 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 24

Conread position: 133-740
Cow position: chr22:9371214-9371827 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 472
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 31

Conread position: 137-850
Cow position: chr22:15857652-15858365 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 101

Conread position: 148-850
Cow position: chr22:3489465-3488749 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 7

Conread position: 150-641
Cow position: chr22:1280769-1280291 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 368
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 81

Conread position: 164-564
Cow position: chr22:22862479-22862875 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 62

Conread position: 164-850
Cow position: chr22:25336039-25336738 (view UCSC Genome Browser custom track)
Alignm length: 704
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 63

Conread position: 173-560
Cow position: chr22:28997690-28997305 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 58

Conread position: 181-542
Cow position: chr22:26944304-26943945 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 181-676
Cow position: chr22:6202559-6202067 (view UCSC Genome Browser custom track)
Alignm length: 501
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 59

Conread position: 182-850
Cow position: chr22:11988800-11988132 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 43

Conread position: 184-850
Cow position: chr22:8734627-8733945 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 40

Conread position: 188-445
Cow position: chr22:30513921-30514173 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 187
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 147, 48

Conread position: 195-850
Cow position: chr22:13697003-13696339 (view UCSC Genome Browser custom track)
Alignm length: 671
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 41

Conread position: 196-569
Cow position: chr22:27320580-27320942 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 41

Conread position: 203-580
Cow position: chr22:5452579-5452954 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 33

Conread position: 205-850
Cow position: chr22:34607417-34608058 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 194, 20

Conread position: 206-705
Cow position: chr22:34759136-34758626 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 77

Conread position: 207-850
Cow position: chr22:26090305-26089649 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 29

Conread position: 208-850
Cow position: chr22:15920897-15920258 (view UCSC Genome Browser custom track)
Alignm length: 649
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 28

Conread position: 236-848
Cow position: chr22:44925370-44924754 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 46

Conread position: 236-850
Cow position: chr22:10313589-10314211 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 12

Conread position: 236-850
Cow position: chr22:19048817-19048194 (view UCSC Genome Browser custom track)
Alignm length: 628
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 47

Conread position: 236-850
Cow position: chr22:35910531-35909899 (view UCSC Genome Browser custom track)
Alignm length: 634
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 46

Conread position: 243-436
Cow position: chr22:30089328-30089513 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 87, 40

Conread position: 244-451
Cow position: chr22:46658995-46659196 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 89, 38

Conread position: 253-438
Cow position: chr22:5624512-5624331 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 80, 30

Conread position: 253-850
Cow position: chr22:34171424-34172037 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 30

Conread position: 268-467
Cow position: chr22:5929865-5929666 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 35, 15

Conread position: 268-507
Cow position: chr22:18191496-18191738 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 15

Conread position: 275-850
Cow position: chr22:37323273-37323850 (view UCSC Genome Browser custom track)
Alignm length: 590
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 8

Conread position: 282-663
Cow position: chr22:15048989-15049346 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 129

Show alignments to all cow chromosomes.