Cow genome map

Conread name: Utr1-UTR010044B01

Conread position: 1-222
Cow position:
Alignm length: 230
Alignm identity: 175
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 100, 124

Conread position: 1-225
Cow position:
Alignm length: 233
Alignm identity: 180
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 100, 21

Conread position: 1-225
Cow position:
Alignm length: 234
Alignm identity: 179
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 98, 0

Conread position: 1-230
Cow position:
Alignm length: 238
Alignm identity: 182
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 98, 31

Conread position: 1-250
Cow position:
Alignm length: 262
Alignm identity: 192
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 88, 164

Conread position: 1-328
Cow position:
Alignm length: 336
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-328
Cow position:
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-328
Cow position:
Alignm length: 334
Alignm identity: 234
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 102, 22

Conread position: 1-328
Cow position:
Alignm length: 336
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 80

Conread position: 1-402
Cow position:
Alignm length: 412
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 236

Conread position: 1-402
Cow position:
Alignm length: 410
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 200

Conread position: 1-410
Cow position:
Alignm length: 420
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 125

Conread position: 1-414
Cow position:
Alignm length: 423
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-417
Cow position:
Alignm length: 428
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 134

Conread position: 1-431
Cow position:
Alignm length: 439
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-431
Cow position:
Alignm length: 441
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 87

Conread position: 1-432
Cow position:
Alignm length: 441
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-438
Cow position:
Alignm length: 446
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 126

Conread position: 1-443
Cow position:
Alignm length: 452
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-472
Cow position:
Alignm length: 478
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 32

Conread position: 1-526
Cow position:
Alignm length: 536
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-547
Cow position:
Alignm length: 557
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-579
Cow position:
Alignm length: 589
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-611
Cow position:
Alignm length: 628
Alignm identity: 467
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-626
Cow position:
Alignm length: 639
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 80

Conread position: 1-627
Cow position:
Alignm length: 643
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-632
Cow position:
Alignm length: 646
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 234

Conread position: 1-696
Cow position:
Alignm length: 714
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-749
Cow position:
Alignm length: 768
Alignm identity: 575
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-841
Cow position:
Alignm length: 867
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 241

Conread position: 1-846
Cow position:
Alignm length: 888
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 221

Conread position: 1-850
Cow position:
Alignm length: 870
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 233

Conread position: 1-850
Cow position:
Alignm length: 899
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-850
Cow position:
Alignm length: 871
Alignm identity: 647
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 31

Conread position: 1-850
Cow position:
Alignm length: 870
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 242

Conread position: 1-850
Cow position:
Alignm length: 873
Alignm identity: 655
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 233

Conread position: 1-850
Cow position:
Alignm length: 876
Alignm identity: 630
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 235

Conread position: 1-850
Cow position:
Alignm length: 871
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 233

Conread position: 1-850
Cow position:
Alignm length: 876
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 1-850
Cow position:
Alignm length: 873
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position:
Alignm length: 881
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 240

Conread position: 1-850
Cow position:
Alignm length: 877
Alignm identity: 672
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position:
Alignm length: 870
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 241

Conread position: 1-850
Cow position:
Alignm length: 900
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 257

Conread position: 1-850
Cow position:
Alignm length: 871
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 163

Conread position: 1-850
Cow position:
Alignm length: 869
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 80

Conread position: 1-850
Cow position:
Alignm length: 871
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 243

Conread position: 1-850
Cow position:
Alignm length: 874
Alignm identity: 675
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 23

Conread position: 1-850
Cow position:
Alignm length: 881
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 232

Conread position: 1-850
Cow position:
Alignm length: 876
Alignm identity: 670
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 133

Conread position: 1-850
Cow position:
Alignm length: 878
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 236

Conread position: 1-850
Cow position:
Alignm length: 893
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 240

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 29

Conread position: 1-850
Cow position:
Alignm length: 876
Alignm identity: 675
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 1-850
Cow position:
Alignm length: 873
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 242

Conread position: 1-850
Cow position:
Alignm length: 874
Alignm identity: 655
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 229

Conread position: 1-850
Cow position:
Alignm length: 880
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 244

Conread position: 1-850
Cow position:
Alignm length: 863
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 84

Conread position: 2-514
Cow position:
Alignm length: 524
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 238

Conread position: 2-850
Cow position:
Alignm length: 867
Alignm identity: 648
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 5-224
Cow position:
Alignm length: 228
Alignm identity: 171
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 96, 0

Conread position: 5-269
Cow position:
Alignm length: 273
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 230

Conread position: 5-460
Cow position:
Alignm length: 467
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 230

Conread position: 5-840
Cow position:
Alignm length: 863
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 66

Conread position: 6-840
Cow position:
Alignm length: 855
Alignm identity: 632
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 89

Conread position: 6-847
Cow position:
Alignm length: 868
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 26

Conread position: 7-850
Cow position:
Alignm length: 864
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 231

Conread position: 10-850
Cow position:
Alignm length: 863
Alignm identity: 670
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 229

Conread position: 11-471
Cow position:
Alignm length: 487
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 111

Conread position: 11-850
Cow position:
Alignm length: 864
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 155

Conread position: 14-828
Cow position:
Alignm length: 830
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 230

Conread position: 15-850
Cow position:
Alignm length: 860
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 219

Conread position: 18-843
Cow position:
Alignm length: 851
Alignm identity: 643
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 221

Conread position: 19-850
Cow position:
Alignm length: 847
Alignm identity: 639
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 34

Conread position: 23-850
Cow position:
Alignm length: 853
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 221

Conread position: 24-468
Cow position:
Alignm length: 452
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 211

Conread position: 24-850
Cow position:
Alignm length: 853
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 215

Conread position: 25-389
Cow position:
Alignm length: 383
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 228

Conread position: 27-850
Cow position:
Alignm length: 849
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 189

Conread position: 28-850
Cow position:
Alignm length: 848
Alignm identity: 647
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 216

Conread position: 33-349
Cow position:
Alignm length: 324
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 202

Conread position: 41-287
Cow position:
Alignm length: 256
Alignm identity: 192
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 58, 203

Conread position: 42-850
Cow position:
Alignm length: 842
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 203

Conread position: 46-303
Cow position:
Alignm length: 266
Alignm identity: 201
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 55, 8

Conread position: 49-840
Cow position:
Alignm length: 818
Alignm identity: 602
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 186

Conread position: 51-800
Cow position:
Alignm length: 774
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 6

Conread position: 52-431
Cow position:
Alignm length: 389
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 192

Conread position: 59-850
Cow position:
Alignm length: 812
Alignm identity: 611
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 179

Conread position: 67-444
Cow position:
Alignm length: 385
Alignm identity: 257
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 34, 130

Conread position: 68-850
Cow position:
Alignm length: 811
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 172

Conread position: 81-459
Cow position:
Alignm length: 389
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 158

Conread position: 86-473
Cow position:
Alignm length: 403
Alignm identity: 277
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 20, 160

Conread position: 101-328
Cow position:
Alignm length: 232
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 80, 130

Conread position: 102-849
Cow position:
Alignm length: 772
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 138

Conread position: 103-324
Cow position:
Alignm length: 226
Alignm identity: 168
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 78, 128

Conread position: 122-603
Cow position:
Alignm length: 494
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 103

Conread position: 125-848
Cow position:
Alignm length: 746
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 112

Conread position: 131-327
Cow position:
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 50, 104

Conread position: 131-420
Cow position:
Alignm length: 302
Alignm identity: 198
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 101

Conread position: 148-736
Cow position:
Alignm length: 605
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 22

Conread position: 149-729
Cow position:
Alignm length: 594
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 89

Conread position: 158-850
Cow position:
Alignm length: 711
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 73

Conread position: 170-849
Cow position:
Alignm length: 697
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 55

Conread position: 181-740
Cow position:
Alignm length: 570
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 44

Conread position: 183-846
Cow position:
Alignm length: 676
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 40

Conread position: 195-850
Cow position:
Alignm length: 672
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 41

Conread position: 202-809
Cow position:
Alignm length: 621
Alignm identity: 457
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 27

Conread position: 202-850
Cow position:
Alignm length: 664
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 34

Conread position: 214-431
Cow position:
Alignm length: 219
Alignm identity: 168
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 119, 19

Conread position: 236-849
Cow position:
Alignm length: 626
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 56

Conread position: 236-850
Cow position:
Alignm length: 634
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 46

Conread position: 241-625
Cow position:
Alignm length: 394
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 42

Conread position: 241-675
Cow position:
Alignm length: 443
Alignm identity: 283
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 92, 54

Conread position: 241-849
Cow position:
Alignm length: 620
Alignm identity: 484
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 41

Conread position: 243-850
Cow position:
Alignm length: 618
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 39

Conread position: 277-848
Cow position:
Alignm length: 582
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 6

Show alignments to all cow chromosomes.