Cow genome map

Conread name: Utr1-UTR010044B01

Conread position: 1-225
Cow position:
Alignm length: 233
Alignm identity: 179
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 98, 0

Conread position: 1-225
Cow position:
Alignm length: 233
Alignm identity: 176
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 98, 0

Conread position: 1-269
Cow position:
Alignm length: 270
Alignm identity: 184
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 100, 108

Conread position: 1-307
Cow position:
Alignm length: 311
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 98

Conread position: 1-323
Cow position:
Alignm length: 331
Alignm identity: 235
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 98, 74

Conread position: 1-328
Cow position:
Alignm length: 336
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 30

Conread position: 1-336
Cow position:
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 70

Conread position: 1-336
Cow position:
Alignm length: 345
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 70

Conread position: 1-366
Cow position:
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 54

Conread position: 1-389
Cow position:
Alignm length: 404
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 169

Conread position: 1-408
Cow position:
Alignm length: 418
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 64

Conread position: 1-415
Cow position:
Alignm length: 432
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 139

Conread position: 1-425
Cow position:
Alignm length: 435
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-432
Cow position:
Alignm length: 441
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-468
Cow position:
Alignm length: 478
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 134

Conread position: 1-473
Cow position:
Alignm length: 483
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-497
Cow position:
Alignm length: 509
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 245

Conread position: 1-507
Cow position:
Alignm length: 517
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-539
Cow position:
Alignm length: 549
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-562
Cow position:
Alignm length: 576
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 238

Conread position: 1-598
Cow position:
Alignm length: 615
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 147

Conread position: 1-664
Cow position:
Alignm length: 691
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 74

Conread position: 1-673
Cow position:
Alignm length: 689
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 31

Conread position: 1-730
Cow position:
Alignm length: 749
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 82

Conread position: 1-767
Cow position:
Alignm length: 780
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 49

Conread position: 1-774
Cow position:
Alignm length: 817
Alignm identity: 619
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 114

Conread position: 1-800
Cow position:
Alignm length: 819
Alignm identity: 611
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 245

Conread position: 1-804
Cow position:
Alignm length: 833
Alignm identity: 624
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 242

Conread position: 1-809
Cow position:
Alignm length: 842
Alignm identity: 572
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 58

Conread position: 1-814
Cow position:
Alignm length: 851
Alignm identity: 634
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 251

Conread position: 1-841
Cow position:
Alignm length: 861
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 169

Conread position: 1-841
Cow position:
Alignm length: 880
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 22

Conread position: 1-842
Cow position:
Alignm length: 868
Alignm identity: 653
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 128

Conread position: 1-843
Cow position:
Alignm length: 864
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 248

Conread position: 1-846
Cow position:
Alignm length: 873
Alignm identity: 534
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 335, 104

Conread position: 1-846
Cow position:
Alignm length: 861
Alignm identity: 641
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 141

Conread position: 1-848
Cow position:
Alignm length: 867
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 148

Conread position: 1-848
Cow position:
Alignm length: 873
Alignm identity: 645
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 230

Conread position: 1-849
Cow position:
Alignm length: 872
Alignm identity: 681
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 148

Conread position: 1-849
Cow position:
Alignm length: 882
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 242

Conread position: 1-850
Cow position:
Alignm length: 876
Alignm identity: 670
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 244

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 665
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 243

Conread position: 1-850
Cow position:
Alignm length: 877
Alignm identity: 665
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 214

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 680
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position:
Alignm length: 876
Alignm identity: 670
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 31

Conread position: 1-850
Cow position:
Alignm length: 880
Alignm identity: 665
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 209

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 634
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 233

Conread position: 1-850
Cow position:
Alignm length: 873
Alignm identity: 649
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-850
Cow position:
Alignm length: 891
Alignm identity: 645
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 54

Conread position: 1-850
Cow position:
Alignm length: 894
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 250

Conread position: 1-850
Cow position:
Alignm length: 877
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position:
Alignm length: 882
Alignm identity: 674
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 238

Conread position: 1-850
Cow position:
Alignm length: 877
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position:
Alignm length: 878
Alignm identity: 658
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position:
Alignm length: 876
Alignm identity: 665
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 244

Conread position: 1-850
Cow position:
Alignm length: 874
Alignm identity: 646
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 93

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 241

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 124

Conread position: 1-850
Cow position:
Alignm length: 866
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 237

Conread position: 1-850
Cow position:
Alignm length: 872
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 22

Conread position: 1-850
Cow position:
Alignm length: 877
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 243

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 2-303
Cow position:
Alignm length: 310
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 237

Conread position: 2-351
Cow position:
Alignm length: 358
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 236

Conread position: 2-506
Cow position:
Alignm length: 525
Alignm identity: 337
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 69, 86

Conread position: 2-609
Cow position:
Alignm length: 621
Alignm identity: 459
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 137

Conread position: 2-850
Cow position:
Alignm length: 876
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 243

Conread position: 2-850
Cow position:
Alignm length: 876
Alignm identity: 642
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 243

Conread position: 4-451
Cow position:
Alignm length: 462
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 242

Conread position: 5-526
Cow position:
Alignm length: 532
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 229

Conread position: 5-526
Cow position:
Alignm length: 529
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 175

Conread position: 5-594
Cow position:
Alignm length: 610
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 230

Conread position: 5-735
Cow position:
Alignm length: 762
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 151

Conread position: 5-794
Cow position:
Alignm length: 811
Alignm identity: 601
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 235

Conread position: 5-848
Cow position:
Alignm length: 882
Alignm identity: 591
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 52

Conread position: 5-848
Cow position:
Alignm length: 865
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 129

Conread position: 6-702
Cow position:
Alignm length: 744
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 119

Conread position: 6-850
Cow position:
Alignm length: 870
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 239

Conread position: 7-456
Cow position:
Alignm length: 460
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 231

Conread position: 7-459
Cow position:
Alignm length: 463
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 232

Conread position: 7-700
Cow position:
Alignm length: 714
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 240

Conread position: 7-850
Cow position:
Alignm length: 879
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 232

Conread position: 10-224
Cow position:
Alignm length: 224
Alignm identity: 176
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 68, 0

Conread position: 10-322
Cow position:
Alignm length: 319
Alignm identity: 220
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 79, 116

Conread position: 10-351
Cow position:
Alignm length: 354
Alignm identity: 217
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 89, 146

Conread position: 10-437
Cow position:
Alignm length: 437
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 125

Conread position: 12-685
Cow position:
Alignm length: 685
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 230

Conread position: 16-789
Cow position:
Alignm length: 795
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 229

Conread position: 18-293
Cow position:
Alignm length: 284
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 217

Conread position: 18-310
Cow position:
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 150

Conread position: 22-850
Cow position:
Alignm length: 865
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 223

Conread position: 28-275
Cow position:
Alignm length: 258
Alignm identity: 180
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 71, 208

Conread position: 28-400
Cow position:
Alignm length: 382
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 196

Conread position: 28-841
Cow position:
Alignm length: 838
Alignm identity: 635
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 87

Conread position: 33-572
Cow position:
Alignm length: 552
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 116

Conread position: 38-848
Cow position:
Alignm length: 831
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 254

Conread position: 40-850
Cow position:
Alignm length: 836
Alignm identity: 619
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 10

Conread position: 56-850
Cow position:
Alignm length: 815
Alignm identity: 580
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 101

Conread position: 56-850
Cow position:
Alignm length: 821
Alignm identity: 613
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 158

Conread position: 64-458
Cow position:
Alignm length: 411
Alignm identity: 287
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 32, 232

Conread position: 75-725
Cow position:
Alignm length: 675
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 85

Conread position: 84-388
Cow position:
Alignm length: 314
Alignm identity: 227
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 41

Conread position: 88-850
Cow position:
Alignm length: 787
Alignm identity: 604
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 154

Conread position: 97-403
Cow position:
Alignm length: 312
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 28

Conread position: 98-850
Cow position:
Alignm length: 769
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 137

Conread position: 103-503
Cow position:
Alignm length: 409
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 35

Conread position: 103-849
Cow position:
Alignm length: 768
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 132

Conread position: 103-850
Cow position:
Alignm length: 770
Alignm identity: 583
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 132

Conread position: 109-539
Cow position:
Alignm length: 437
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 131

Conread position: 109-850
Cow position:
Alignm length: 762
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 131

Conread position: 111-840
Cow position:
Alignm length: 756
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 25

Conread position: 113-850
Cow position:
Alignm length: 771
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 122

Conread position: 124-848
Cow position:
Alignm length: 737
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 114

Conread position: 125-800
Cow position:
Alignm length: 695
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 106

Conread position: 131-491
Cow position:
Alignm length: 367
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 100

Conread position: 134-384
Cow position:
Alignm length: 257
Alignm identity: 179
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 49, 23

Conread position: 147-850
Cow position:
Alignm length: 720
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 88

Conread position: 148-473
Cow position:
Alignm length: 332
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 86

Conread position: 148-542
Cow position:
Alignm length: 398
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 82

Conread position: 158-584
Cow position:
Alignm length: 436
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 128

Conread position: 180-438
Cow position:
Alignm length: 259
Alignm identity: 172
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 54, 0

Conread position: 180-850
Cow position:
Alignm length: 689
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 53

Conread position: 181-431
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 50, 0

Conread position: 181-454
Cow position:
Alignm length: 275
Alignm identity: 167
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 152, 50

Conread position: 181-789
Cow position:
Alignm length: 616
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 181-850
Cow position:
Alignm length: 688
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 181-850
Cow position:
Alignm length: 686
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 181-850
Cow position:
Alignm length: 687
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 182-847
Cow position:
Alignm length: 680
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 100

Conread position: 184-652
Cow position:
Alignm length: 479
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 112

Conread position: 184-652
Cow position:
Alignm length: 479
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 112

Conread position: 185-508
Cow position:
Alignm length: 326
Alignm identity: 224
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 145, 51

Conread position: 189-421
Cow position:
Alignm length: 234
Alignm identity: 180
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 144, 47

Conread position: 212-751
Cow position:
Alignm length: 550
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 24

Conread position: 230-530
Cow position:
Alignm length: 303
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 15

Conread position: 231-514
Cow position:
Alignm length: 289
Alignm identity: 189
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 52

Conread position: 236-431
Cow position:
Alignm length: 198
Alignm identity: 152
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 35, 48

Conread position: 236-653
Cow position:
Alignm length: 427
Alignm identity: 288
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 100, 47

Conread position: 236-850
Cow position:
Alignm length: 629
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 236-850
Cow position:
Alignm length: 631
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 47

Conread position: 241-848
Cow position:
Alignm length: 630
Alignm identity: 495
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 42

Conread position: 241-849
Cow position:
Alignm length: 623
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 41

Conread position: 241-849
Cow position:
Alignm length: 625
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 41

Conread position: 242-607
Cow position:
Alignm length: 367
Alignm identity: 249
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 211, 50

Conread position: 244-850
Cow position:
Alignm length: 628
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 39

Conread position: 248-850
Cow position:
Alignm length: 620
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 34

Conread position: 249-850
Cow position:
Alignm length: 618
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 33

Conread position: 253-848
Cow position:
Alignm length: 621
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 30

Conread position: 259-475
Cow position:
Alignm length: 219
Alignm identity: 169
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 16, 25

Conread position: 271-841
Cow position:
Alignm length: 586
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 10

Conread position: 316-848
Cow position:
Alignm length: 550
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 49

Show alignments to all cow chromosomes.