Cow genome map

Conread name: Utr1-UTR010044B01

Conread position: 1-225
Cow position:
Alignm length: 233
Alignm identity: 176
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 101, 0

Conread position: 1-260
Cow position:
Alignm length: 268
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 73

Conread position: 1-278
Cow position:
Alignm length: 286
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 1-281
Cow position:
Alignm length: 289
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-328
Cow position:
Alignm length: 336
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 1-371
Cow position:
Alignm length: 380
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-391
Cow position:
Alignm length: 402
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 242

Conread position: 1-391
Cow position:
Alignm length: 399
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 237

Conread position: 1-409
Cow position:
Alignm length: 418
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-410
Cow position:
Alignm length: 427
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 112

Conread position: 1-418
Cow position:
Alignm length: 428
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-423
Cow position:
Alignm length: 432
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 68

Conread position: 1-428
Cow position:
Alignm length: 437
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-443
Cow position:
Alignm length: 450
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 237

Conread position: 1-530
Cow position:
Alignm length: 536
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 229

Conread position: 1-584
Cow position:
Alignm length: 594
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-584
Cow position:
Alignm length: 594
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 144

Conread position: 1-584
Cow position:
Alignm length: 595
Alignm identity: 461
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-607
Cow position:
Alignm length: 621
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 146

Conread position: 1-694
Cow position:
Alignm length: 707
Alignm identity: 486
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 246

Conread position: 1-699
Cow position:
Alignm length: 726
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 68

Conread position: 1-750
Cow position:
Alignm length: 792
Alignm identity: 560
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 155

Conread position: 1-752
Cow position:
Alignm length: 765
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 241

Conread position: 1-841
Cow position:
Alignm length: 862
Alignm identity: 653
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 237

Conread position: 1-843
Cow position:
Alignm length: 868
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 1-846
Cow position:
Alignm length: 868
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 53

Conread position: 1-848
Cow position:
Alignm length: 866
Alignm identity: 589
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 22

Conread position: 1-849
Cow position:
Alignm length: 873
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 244

Conread position: 1-850
Cow position:
Alignm length: 870
Alignm identity: 642
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 191

Conread position: 1-850
Cow position:
Alignm length: 871
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 165

Conread position: 1-850
Cow position:
Alignm length: 886
Alignm identity: 674
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 121

Conread position: 1-850
Cow position:
Alignm length: 877
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 213

Conread position: 1-850
Cow position:
Alignm length: 878
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position:
Alignm length: 886
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 147

Conread position: 1-850
Cow position:
Alignm length: 876
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position:
Alignm length: 869
Alignm identity: 675
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 243

Conread position: 1-850
Cow position:
Alignm length: 882
Alignm identity: 645
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 243

Conread position: 1-850
Cow position:
Alignm length: 876
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 214

Conread position: 1-850
Cow position:
Alignm length: 871
Alignm identity: 655
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 80

Conread position: 1-850
Cow position:
Alignm length: 883
Alignm identity: 649
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 222

Conread position: 1-850
Cow position:
Alignm length: 871
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 674
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 2-595
Cow position:
Alignm length: 607
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 244

Conread position: 2-850
Cow position:
Alignm length: 874
Alignm identity: 675
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 148

Conread position: 4-542
Cow position:
Alignm length: 551
Alignm identity: 393
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 137

Conread position: 7-444
Cow position:
Alignm length: 450
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 237

Conread position: 7-849
Cow position:
Alignm length: 866
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 232

Conread position: 7-850
Cow position:
Alignm length: 870
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 33

Conread position: 7-850
Cow position:
Alignm length: 869
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 33

Conread position: 7-850
Cow position:
Alignm length: 866
Alignm identity: 634
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 232

Conread position: 12-442
Cow position:
Alignm length: 442
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 141

Conread position: 23-850
Cow position:
Alignm length: 853
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 221

Conread position: 24-850
Cow position:
Alignm length: 851
Alignm identity: 636
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 132

Conread position: 34-319
Cow position:
Alignm length: 294
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 201

Conread position: 36-843
Cow position:
Alignm length: 822
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 145, 85

Conread position: 46-607
Cow position:
Alignm length: 584
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 145

Conread position: 49-850
Cow position:
Alignm length: 828
Alignm identity: 627
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 190

Conread position: 55-287
Cow position:
Alignm length: 242
Alignm identity: 179
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 44, 75

Conread position: 55-626
Cow position:
Alignm length: 591
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 77

Conread position: 71-850
Cow position:
Alignm length: 799
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 166

Conread position: 75-841
Cow position:
Alignm length: 790
Alignm identity: 601
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 54

Conread position: 82-850
Cow position:
Alignm length: 803
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 116

Conread position: 95-836
Cow position:
Alignm length: 765
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 64

Conread position: 103-850
Cow position:
Alignm length: 768
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 137

Conread position: 116-424
Cow position:
Alignm length: 316
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 126

Conread position: 117-850
Cow position:
Alignm length: 760
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 124

Conread position: 125-492
Cow position:
Alignm length: 375
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 45

Conread position: 125-850
Cow position:
Alignm length: 747
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 115

Conread position: 148-843
Cow position:
Alignm length: 716
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 87

Conread position: 164-523
Cow position:
Alignm length: 366
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 76

Conread position: 181-357
Cow position:
Alignm length: 178
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 152, 52

Conread position: 181-850
Cow position:
Alignm length: 682
Alignm identity: 522
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 53

Conread position: 183-850
Cow position:
Alignm length: 682
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 88

Conread position: 190-350
Cow position:
Alignm length: 162
Alignm identity: 117
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 146, 46

Conread position: 194-850
Cow position:
Alignm length: 668
Alignm identity: 466
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 40

Conread position: 195-838
Cow position:
Alignm length: 669
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 43

Conread position: 196-847
Cow position:
Alignm length: 668
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 26

Conread position: 212-461
Cow position:
Alignm length: 252
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 24

Conread position: 236-442
Cow position:
Alignm length: 208
Alignm identity: 156
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 97, 46

Conread position: 236-716
Cow position:
Alignm length: 491
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 236-736
Cow position:
Alignm length: 519
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 47

Conread position: 236-843
Cow position:
Alignm length: 631
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 46

Conread position: 236-850
Cow position:
Alignm length: 625
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 46

Conread position: 236-850
Cow position:
Alignm length: 631
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 240-584
Cow position:
Alignm length: 349
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 42

Conread position: 241-850
Cow position:
Alignm length: 641
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 41

Conread position: 241-850
Cow position:
Alignm length: 627
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 41

Conread position: 243-850
Cow position:
Alignm length: 624
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 39

Conread position: 245-850
Cow position:
Alignm length: 621
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 39

Conread position: 261-514
Cow position:
Alignm length: 267
Alignm identity: 194
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 72, 22

Conread position: 269-850
Cow position:
Alignm length: 599
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 23

Show alignments to all cow chromosomes.