Cow genome map
Conread name: | Utr1-UTR010044B01 |
Conread position: | 1-222 |
Cow position: | chr27:11488723-11488947 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 164 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 98, 168 |
Conread position: | 1-300 |
Cow position: | chr27:15034381-15034080 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 233 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 83 |
Conread position: | 1-310 |
Cow position: | chr27:773486-773799 (view UCSC Genome Browser custom track) |
Alignm length: | 318 |
Alignm identity: | 237 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 243 |
Conread position: | 1-315 |
Cow position: | chr27:18697052-18697370 (view UCSC Genome Browser custom track) |
Alignm length: | 323 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 241 |
Conread position: | 1-336 |
Cow position: | chr27:26599640-26599963 (view UCSC Genome Browser custom track) |
Alignm length: | 340 |
Alignm identity: | 252 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 159 |
Conread position: | 1-341 |
Cow position: | chr27:9332458-9332803 (view UCSC Genome Browser custom track) |
Alignm length: | 349 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 240 |
Conread position: | 1-431 |
Cow position: | chr27:13900608-13901040 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 22 |
Conread position: | 1-431 |
Cow position: | chr27:22648195-22647760 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 332 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 243 |
Conread position: | 1-433 |
Cow position: | chr27:10378898-10379334 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 234 |
Conread position: | 1-439 |
Cow position: | chr27:30035523-30035974 (view UCSC Genome Browser custom track) |
Alignm length: | 459 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 232 |
Conread position: | 1-584 |
Cow position: | chr27:12749744-12750325 (view UCSC Genome Browser custom track) |
Alignm length: | 594 |
Alignm identity: | 446 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 238 |
Conread position: | 1-609 |
Cow position: | chr27:15543726-15544346 (view UCSC Genome Browser custom track) |
Alignm length: | 625 |
Alignm identity: | 470 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 238 |
Conread position: | 1-610 |
Cow position: | chr27:27665712-27666341 (view UCSC Genome Browser custom track) |
Alignm length: | 635 |
Alignm identity: | 469 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 238 |
Conread position: | 1-636 |
Cow position: | chr27:9990497-9989844 (view UCSC Genome Browser custom track) |
Alignm length: | 665 |
Alignm identity: | 494 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 176 |
Conread position: | 1-787 |
Cow position: | chr27:1535895-1536685 (view UCSC Genome Browser custom track) |
Alignm length: | 810 |
Alignm identity: | 584 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 160 |
Conread position: | 1-812 |
Cow position: | chr27:27193646-27192807 (view UCSC Genome Browser custom track) |
Alignm length: | 850 |
Alignm identity: | 582 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 124 |
Conread position: | 1-842 |
Cow position: | chr27:8426573-8427431 (view UCSC Genome Browser custom track) |
Alignm length: | 875 |
Alignm identity: | 655 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 159 |
Conread position: | 1-845 |
Cow position: | chr27:22742695-22741854 (view UCSC Genome Browser custom track) |
Alignm length: | 854 |
Alignm identity: | 275 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 71 |
Conread position: | 1-849 |
Cow position: | chr27:15634621-15633763 (view UCSC Genome Browser custom track) |
Alignm length: | 874 |
Alignm identity: | 661 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 133 |
Conread position: | 1-850 |
Cow position: | chr27:1520391-1521255 (view UCSC Genome Browser custom track) |
Alignm length: | 875 |
Alignm identity: | 665 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 243 |
Conread position: | 1-850 |
Cow position: | chr27:3232820-3231957 (view UCSC Genome Browser custom track) |
Alignm length: | 868 |
Alignm identity: | 651 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 102, 240 |
Conread position: | 1-850 |
Cow position: | chr27:4982083-4982941 (view UCSC Genome Browser custom track) |
Alignm length: | 871 |
Alignm identity: | 664 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 233 |
Conread position: | 1-850 |
Cow position: | chr27:5913652-5914518 (view UCSC Genome Browser custom track) |
Alignm length: | 886 |
Alignm identity: | 645 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 130 |
Conread position: | 1-850 |
Cow position: | chr27:5924971-5925843 (view UCSC Genome Browser custom track) |
Alignm length: | 883 |
Alignm identity: | 631 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 251 |
Conread position: | 1-850 |
Cow position: | chr27:5984320-5983450 (view UCSC Genome Browser custom track) |
Alignm length: | 875 |
Alignm identity: | 660 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 235 |
Conread position: | 1-850 |
Cow position: | chr27:8960318-8959436 (view UCSC Genome Browser custom track) |
Alignm length: | 888 |
Alignm identity: | 677 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 243 |
Conread position: | 1-850 |
Cow position: | chr27:13353008-13353886 (view UCSC Genome Browser custom track) |
Alignm length: | 884 |
Alignm identity: | 669 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 243 |
Conread position: | 1-850 |
Cow position: | chr27:14296927-14297786 (view UCSC Genome Browser custom track) |
Alignm length: | 877 |
Alignm identity: | 661 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 245 |
Conread position: | 1-850 |
Cow position: | chr27:16031686-16030816 (view UCSC Genome Browser custom track) |
Alignm length: | 875 |
Alignm identity: | 670 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 237 |
Conread position: | 1-850 |
Cow position: | chr27:19524001-19523129 (view UCSC Genome Browser custom track) |
Alignm length: | 879 |
Alignm identity: | 668 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 242 |
Conread position: | 1-850 |
Cow position: | chr27:20810125-20810997 (view UCSC Genome Browser custom track) |
Alignm length: | 882 |
Alignm identity: | 684 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 245 |
Conread position: | 1-850 |
Cow position: | chr27:21451154-21452027 (view UCSC Genome Browser custom track) |
Alignm length: | 882 |
Alignm identity: | 662 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 18 |
Conread position: | 1-850 |
Cow position: | chr27:26855774-26856621 (view UCSC Genome Browser custom track) |
Alignm length: | 877 |
Alignm identity: | 653 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 138 |
Conread position: | 1-850 |
Cow position: | chr27:27291106-27291974 (view UCSC Genome Browser custom track) |
Alignm length: | 878 |
Alignm identity: | 665 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 80 |
Conread position: | 1-850 |
Cow position: | chr27:27729761-27728905 (view UCSC Genome Browser custom track) |
Alignm length: | 879 |
Alignm identity: | 651 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 53 |
Conread position: | 2-261 |
Cow position: | chr27:3991719-3991981 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 206 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 62 |
Conread position: | 2-850 |
Cow position: | chr27:15273361-15272493 (view UCSC Genome Browser custom track) |
Alignm length: | 880 |
Alignm identity: | 664 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 99, 253 |
Conread position: | 5-358 |
Cow position: | chr27:22723073-22723428 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 196 |
Conread position: | 5-433 |
Cow position: | chr27:16788742-16788284 (view UCSC Genome Browser custom track) |
Alignm length: | 462 |
Alignm identity: | 338 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 82, 309 |
Conread position: | 5-526 |
Cow position: | chr27:30571548-30572063 (view UCSC Genome Browser custom track) |
Alignm length: | 532 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 170 |
Conread position: | 5-730 |
Cow position: | chr27:17567816-17568549 (view UCSC Genome Browser custom track) |
Alignm length: | 745 |
Alignm identity: | 516 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 33 |
Conread position: | 5-850 |
Cow position: | chr27:15405365-15406200 (view UCSC Genome Browser custom track) |
Alignm length: | 869 |
Alignm identity: | 617 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 76 |
Conread position: | 6-850 |
Cow position: | chr27:8972163-8973023 (view UCSC Genome Browser custom track) |
Alignm length: | 868 |
Alignm identity: | 664 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 188 |
Conread position: | 6-850 |
Cow position: | chr27:25801489-25800630 (view UCSC Genome Browser custom track) |
Alignm length: | 866 |
Alignm identity: | 667 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 94, 233 |
Conread position: | 7-451 |
Cow position: | chr27:12146926-12146477 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 237 |
Conread position: | 7-850 |
Cow position: | chr27:166204-165339 (view UCSC Genome Browser custom track) |
Alignm length: | 874 |
Alignm identity: | 659 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 219 |
Conread position: | 7-850 |
Cow position: | chr27:29036653-29035801 (view UCSC Genome Browser custom track) |
Alignm length: | 868 |
Alignm identity: | 657 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 92, 233 |
Conread position: | 10-721 |
Cow position: | chr27:23318203-23317507 (view UCSC Genome Browser custom track) |
Alignm length: | 723 |
Alignm identity: | 506 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 10, 168 |
Conread position: | 12-254 |
Cow position: | chr27:24260972-24260714 (view UCSC Genome Browser custom track) |
Alignm length: | 259 |
Alignm identity: | 199 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 12-848 |
Cow position: | chr27:31267951-31268793 (view UCSC Genome Browser custom track) |
Alignm length: | 864 |
Alignm identity: | 609 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 87, 149 |
Conread position: | 23-850 |
Cow position: | chr27:1082430-1081595 (view UCSC Genome Browser custom track) |
Alignm length: | 850 |
Alignm identity: | 628 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 209 |
Conread position: | 28-850 |
Cow position: | chr27:4332002-4331158 (view UCSC Genome Browser custom track) |
Alignm length: | 852 |
Alignm identity: | 649 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 209 |
Conread position: | 38-793 |
Cow position: | chr27:25799006-25799774 (view UCSC Genome Browser custom track) |
Alignm length: | 778 |
Alignm identity: | 555 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 63, 174 |
Conread position: | 39-720 |
Cow position: | chr27:27044932-27045618 (view UCSC Genome Browser custom track) |
Alignm length: | 698 |
Alignm identity: | 518 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 62, 197 |
Conread position: | 65-850 |
Cow position: | chr27:2000618-2001425 (view UCSC Genome Browser custom track) |
Alignm length: | 814 |
Alignm identity: | 614 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 34, 176 |
Conread position: | 68-850 |
Cow position: | chr27:24296486-24295679 (view UCSC Genome Browser custom track) |
Alignm length: | 814 |
Alignm identity: | 568 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 100, 168 |
Conread position: | 72-850 |
Cow position: | chr27:10578728-10579524 (view UCSC Genome Browser custom track) |
Alignm length: | 804 |
Alignm identity: | 608 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 167 |
Conread position: | 74-538 |
Cow position: | chr27:3759657-3760126 (view UCSC Genome Browser custom track) |
Alignm length: | 479 |
Alignm identity: | 359 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 142 |
Conread position: | 95-524 |
Cow position: | chr27:27235297-27234864 (view UCSC Genome Browser custom track) |
Alignm length: | 440 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 146 |
Conread position: | 100-685 |
Cow position: | chr27:25971786-25971192 (view UCSC Genome Browser custom track) |
Alignm length: | 603 |
Alignm identity: | 441 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 72 |
Conread position: | 102-322 |
Cow position: | chr27:22329030-22329250 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 155 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 81, 132 |
Conread position: | 103-850 |
Cow position: | chr27:29447259-29446524 (view UCSC Genome Browser custom track) |
Alignm length: | 756 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 132 |
Conread position: | 104-850 |
Cow position: | chr27:26784640-26785393 (view UCSC Genome Browser custom track) |
Alignm length: | 762 |
Alignm identity: | 568 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 131 |
Conread position: | 109-296 |
Cow position: | chr27:20716718-20716904 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 142 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 41, 16 |
Conread position: | 109-850 |
Cow position: | chr27:29811159-29811882 (view UCSC Genome Browser custom track) |
Alignm length: | 756 |
Alignm identity: | 569 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 72, 34 |
Conread position: | 110-295 |
Cow position: | chr27:8261675-8261858 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 135 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 74, 46 |
Conread position: | 121-850 |
Cow position: | chr27:26329768-26330513 (view UCSC Genome Browser custom track) |
Alignm length: | 751 |
Alignm identity: | 567 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 57, 109 |
Conread position: | 127-802 |
Cow position: | chr27:31249090-31249761 (view UCSC Genome Browser custom track) |
Alignm length: | 688 |
Alignm identity: | 471 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 32 |
Conread position: | 131-428 |
Cow position: | chr27:7911829-7912123 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 220 |
Alignm E-value: | 2.8026e-45 |
Alignm gaps (pig, cow): | 50, 5 |
Conread position: | 131-850 |
Cow position: | chr27:27556653-27557379 (view UCSC Genome Browser custom track) |
Alignm length: | 740 |
Alignm identity: | 563 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 50, 102 |
Conread position: | 181-547 |
Cow position: | chr27:27849169-27849533 (view UCSC Genome Browser custom track) |
Alignm length: | 369 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 55 |
Conread position: | 181-848 |
Cow position: | chr27:1188554-1189235 (view UCSC Genome Browser custom track) |
Alignm length: | 689 |
Alignm identity: | 508 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 46, 109 |
Conread position: | 182-697 |
Cow position: | chr27:13308544-13309064 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 398 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 54 |
Conread position: | 182-846 |
Cow position: | chr27:21284329-21283670 (view UCSC Genome Browser custom track) |
Alignm length: | 683 |
Alignm identity: | 487 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 151, 38 |
Conread position: | 187-477 |
Cow position: | chr27:21342434-21342721 (view UCSC Genome Browser custom track) |
Alignm length: | 293 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 146, 44 |
Conread position: | 197-850 |
Cow position: | chr27:11434091-11434743 (view UCSC Genome Browser custom track) |
Alignm length: | 671 |
Alignm identity: | 505 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 36 |
Conread position: | 199-437 |
Cow position: | chr27:15926002-15925767 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 134, 35 |
Conread position: | 206-850 |
Cow position: | chr27:22797732-22797078 (view UCSC Genome Browser custom track) |
Alignm length: | 662 |
Alignm identity: | 504 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 127, 9 |
Conread position: | 207-850 |
Cow position: | chr27:8200863-8201517 (view UCSC Genome Browser custom track) |
Alignm length: | 662 |
Alignm identity: | 488 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 95, 34 |
Conread position: | 230-842 |
Cow position: | chr27:3994360-3993766 (view UCSC Genome Browser custom track) |
Alignm length: | 618 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 103, 52 |
Conread position: | 235-458 |
Cow position: | chr27:219851-219637 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 167 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 98, 47 |
Conread position: | 236-512 |
Cow position: | chr27:526147-525871 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 46 |
Conread position: | 236-579 |
Cow position: | chr27:4768386-4768730 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 228 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 97, 46 |
Conread position: | 262-850 |
Cow position: | chr27:11480908-11481512 (view UCSC Genome Browser custom track) |
Alignm length: | 607 |
Alignm identity: | 460 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 20 |
Conread position: | 266-424 |
Cow position: | chr27:2681302-2681459 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 125 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 67, 17 |
Conread position: | 269-764 |
Cow position: | chr27:14380305-14380795 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 382 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 64, 14 |
Conread position: | 275-847 |
Cow position: | chr27:12281688-12282262 (view UCSC Genome Browser custom track) |
Alignm length: | 584 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 8 |
Show alignments to all cow chromosomes.