Cow genome map

Conread name: Utr1-UTR010044B01

Conread position: 1-222
Cow position:
Alignm length: 226
Alignm identity: 164
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 98, 168

Conread position: 1-300
Cow position:
Alignm length: 309
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 83

Conread position: 1-310
Cow position:
Alignm length: 318
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-315
Cow position:
Alignm length: 323
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 241

Conread position: 1-336
Cow position:
Alignm length: 340
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 159

Conread position: 1-341
Cow position:
Alignm length: 349
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 240

Conread position: 1-431
Cow position:
Alignm length: 440
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 22

Conread position: 1-431
Cow position:
Alignm length: 440
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-433
Cow position:
Alignm length: 444
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 234

Conread position: 1-439
Cow position:
Alignm length: 459
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 232

Conread position: 1-584
Cow position:
Alignm length: 594
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-609
Cow position:
Alignm length: 625
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-610
Cow position:
Alignm length: 635
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-636
Cow position:
Alignm length: 665
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 176

Conread position: 1-787
Cow position:
Alignm length: 810
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 160

Conread position: 1-812
Cow position:
Alignm length: 850
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 124

Conread position: 1-842
Cow position:
Alignm length: 875
Alignm identity: 655
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 159

Conread position: 1-845
Cow position:
Alignm length: 854
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 71

Conread position: 1-849
Cow position:
Alignm length: 874
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 133

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 665
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position:
Alignm length: 868
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 240

Conread position: 1-850
Cow position:
Alignm length: 871
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 233

Conread position: 1-850
Cow position:
Alignm length: 886
Alignm identity: 645
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 130

Conread position: 1-850
Cow position:
Alignm length: 883
Alignm identity: 631
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 251

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 235

Conread position: 1-850
Cow position:
Alignm length: 888
Alignm identity: 677
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position:
Alignm length: 884
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position:
Alignm length: 877
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 245

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 670
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 237

Conread position: 1-850
Cow position:
Alignm length: 879
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 242

Conread position: 1-850
Cow position:
Alignm length: 882
Alignm identity: 684
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 245

Conread position: 1-850
Cow position:
Alignm length: 882
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 18

Conread position: 1-850
Cow position:
Alignm length: 877
Alignm identity: 653
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 138

Conread position: 1-850
Cow position:
Alignm length: 878
Alignm identity: 665
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 80

Conread position: 1-850
Cow position:
Alignm length: 879
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 53

Conread position: 2-261
Cow position:
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 62

Conread position: 2-850
Cow position:
Alignm length: 880
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 253

Conread position: 5-358
Cow position:
Alignm length: 362
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 196

Conread position: 5-433
Cow position:
Alignm length: 462
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 309

Conread position: 5-526
Cow position:
Alignm length: 532
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 170

Conread position: 5-730
Cow position:
Alignm length: 745
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 33

Conread position: 5-850
Cow position:
Alignm length: 869
Alignm identity: 617
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 76

Conread position: 6-850
Cow position:
Alignm length: 868
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 188

Conread position: 6-850
Cow position:
Alignm length: 866
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 233

Conread position: 7-451
Cow position:
Alignm length: 454
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 237

Conread position: 7-850
Cow position:
Alignm length: 874
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 219

Conread position: 7-850
Cow position:
Alignm length: 868
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 233

Conread position: 10-721
Cow position:
Alignm length: 723
Alignm identity: 506
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 168

Conread position: 12-254
Cow position:
Alignm length: 259
Alignm identity: 199
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 65, 0

Conread position: 12-848
Cow position:
Alignm length: 864
Alignm identity: 609
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 149

Conread position: 23-850
Cow position:
Alignm length: 850
Alignm identity: 628
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 209

Conread position: 28-850
Cow position:
Alignm length: 852
Alignm identity: 649
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 209

Conread position: 38-793
Cow position:
Alignm length: 778
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 174

Conread position: 39-720
Cow position:
Alignm length: 698
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 197

Conread position: 65-850
Cow position:
Alignm length: 814
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 176

Conread position: 68-850
Cow position:
Alignm length: 814
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 168

Conread position: 72-850
Cow position:
Alignm length: 804
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 167

Conread position: 74-538
Cow position:
Alignm length: 479
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 142

Conread position: 95-524
Cow position:
Alignm length: 440
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 146

Conread position: 100-685
Cow position:
Alignm length: 603
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 72

Conread position: 102-322
Cow position:
Alignm length: 225
Alignm identity: 155
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 81, 132

Conread position: 103-850
Cow position:
Alignm length: 756
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 132

Conread position: 104-850
Cow position:
Alignm length: 762
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 131

Conread position: 109-296
Cow position:
Alignm length: 193
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 41, 16

Conread position: 109-850
Cow position:
Alignm length: 756
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 34

Conread position: 110-295
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 74, 46

Conread position: 121-850
Cow position:
Alignm length: 751
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 109

Conread position: 127-802
Cow position:
Alignm length: 688
Alignm identity: 471
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 32

Conread position: 131-428
Cow position:
Alignm length: 303
Alignm identity: 220
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 50, 5

Conread position: 131-850
Cow position:
Alignm length: 740
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 102

Conread position: 181-547
Cow position:
Alignm length: 369
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 181-848
Cow position:
Alignm length: 689
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 109

Conread position: 182-697
Cow position:
Alignm length: 525
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 54

Conread position: 182-846
Cow position:
Alignm length: 683
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 38

Conread position: 187-477
Cow position:
Alignm length: 293
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 146, 44

Conread position: 197-850
Cow position:
Alignm length: 671
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 36

Conread position: 199-437
Cow position:
Alignm length: 240
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 35

Conread position: 206-850
Cow position:
Alignm length: 662
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 9

Conread position: 207-850
Cow position:
Alignm length: 662
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 34

Conread position: 230-842
Cow position:
Alignm length: 618
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 52

Conread position: 235-458
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 98, 47

Conread position: 236-512
Cow position:
Alignm length: 279
Alignm identity: 218
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 236-579
Cow position:
Alignm length: 346
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 262-850
Cow position:
Alignm length: 607
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 20

Conread position: 266-424
Cow position:
Alignm length: 160
Alignm identity: 125
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 67, 17

Conread position: 269-764
Cow position:
Alignm length: 508
Alignm identity: 382
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 14

Conread position: 275-847
Cow position:
Alignm length: 584
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 8

Show alignments to all cow chromosomes.