Cow genome map

Conread name: Utr1-UTR010044B01

Conread position: 1-225
Cow position:
Alignm length: 234
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 1-225
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 39, 125

Conread position: 1-240
Cow position:
Alignm length: 248
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 0

Conread position: 1-271
Cow position:
Alignm length: 279
Alignm identity: 206
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 98, 238

Conread position: 1-272
Cow position:
Alignm length: 281
Alignm identity: 208
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 100, 32

Conread position: 1-279
Cow position:
Alignm length: 289
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 240

Conread position: 1-280
Cow position:
Alignm length: 288
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 1-288
Cow position:
Alignm length: 296
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-296
Cow position:
Alignm length: 303
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 36

Conread position: 1-307
Cow position:
Alignm length: 316
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-308
Cow position:
Alignm length: 316
Alignm identity: 214
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 98, 243

Conread position: 1-313
Cow position:
Alignm length: 332
Alignm identity: 229
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 64, 171

Conread position: 1-353
Cow position:
Alignm length: 363
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 240

Conread position: 1-369
Cow position:
Alignm length: 388
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-386
Cow position:
Alignm length: 397
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-414
Cow position:
Alignm length: 423
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 7

Conread position: 1-419
Cow position:
Alignm length: 428
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 232

Conread position: 1-428
Cow position:
Alignm length: 441
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 85

Conread position: 1-440
Cow position:
Alignm length: 449
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 227

Conread position: 1-479
Cow position:
Alignm length: 485
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 72

Conread position: 1-547
Cow position:
Alignm length: 557
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-561
Cow position:
Alignm length: 571
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 9

Conread position: 1-570
Cow position:
Alignm length: 583
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 237

Conread position: 1-575
Cow position:
Alignm length: 587
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 22

Conread position: 1-582
Cow position:
Alignm length: 594
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 245

Conread position: 1-584
Cow position:
Alignm length: 595
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 237

Conread position: 1-606
Cow position:
Alignm length: 619
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 20

Conread position: 1-726
Cow position:
Alignm length: 744
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-741
Cow position:
Alignm length: 755
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 104

Conread position: 1-800
Cow position:
Alignm length: 824
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-840
Cow position:
Alignm length: 860
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 243

Conread position: 1-841
Cow position:
Alignm length: 859
Alignm identity: 646
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-841
Cow position:
Alignm length: 866
Alignm identity: 670
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 27

Conread position: 1-841
Cow position:
Alignm length: 865
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 58

Conread position: 1-842
Cow position:
Alignm length: 868
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 243

Conread position: 1-842
Cow position:
Alignm length: 866
Alignm identity: 658
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 1-847
Cow position:
Alignm length: 865
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 54

Conread position: 1-848
Cow position:
Alignm length: 878
Alignm identity: 650
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 133

Conread position: 1-849
Cow position:
Alignm length: 878
Alignm identity: 681
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 245

Conread position: 1-849
Cow position:
Alignm length: 873
Alignm identity: 675
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 243

Conread position: 1-850
Cow position:
Alignm length: 870
Alignm identity: 658
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-850
Cow position:
Alignm length: 874
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position:
Alignm length: 873
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 242

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 673
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 80

Conread position: 1-850
Cow position:
Alignm length: 878
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 21

Conread position: 1-850
Cow position:
Alignm length: 870
Alignm identity: 645
Alignm E-value: 0
Alignm gaps (pig, cow): 183, 94

Conread position: 1-850
Cow position:
Alignm length: 872
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 235

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position:
Alignm length: 877
Alignm identity: 647
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 40

Conread position: 1-850
Cow position:
Alignm length: 873
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position:
Alignm length: 869
Alignm identity: 640
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 41

Conread position: 1-850
Cow position:
Alignm length: 888
Alignm identity: 670
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position:
Alignm length: 881
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 237

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 653
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 237

Conread position: 1-850
Cow position:
Alignm length: 874
Alignm identity: 674
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 62

Conread position: 1-850
Cow position:
Alignm length: 873
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position:
Alignm length: 874
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 160

Conread position: 1-850
Cow position:
Alignm length: 873
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 242

Conread position: 1-850
Cow position:
Alignm length: 871
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position:
Alignm length: 884
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 296

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 670
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position:
Alignm length: 880
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-850
Cow position:
Alignm length: 872
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 217

Conread position: 1-850
Cow position:
Alignm length: 876
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 244

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 237

Conread position: 1-850
Cow position:
Alignm length: 878
Alignm identity: 629
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 161

Conread position: 1-850
Cow position:
Alignm length: 876
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 121

Conread position: 1-850
Cow position:
Alignm length: 869
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 245

Conread position: 1-850
Cow position:
Alignm length: 885
Alignm identity: 655
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 254

Conread position: 1-850
Cow position:
Alignm length: 874
Alignm identity: 665
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position:
Alignm length: 887
Alignm identity: 673
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 300

Conread position: 1-850
Cow position:
Alignm length: 874
Alignm identity: 647
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 239

Conread position: 1-850
Cow position:
Alignm length: 875
Alignm identity: 625
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 152

Conread position: 2-627
Cow position:
Alignm length: 657
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 304

Conread position: 2-850
Cow position:
Alignm length: 873
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 234

Conread position: 4-584
Cow position:
Alignm length: 591
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 118

Conread position: 5-293
Cow position:
Alignm length: 299
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 43

Conread position: 5-305
Cow position:
Alignm length: 308
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 113

Conread position: 5-648
Cow position:
Alignm length: 652
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 79

Conread position: 5-675
Cow position:
Alignm length: 686
Alignm identity: 456
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 82

Conread position: 5-800
Cow position:
Alignm length: 834
Alignm identity: 619
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 140

Conread position: 5-850
Cow position:
Alignm length: 867
Alignm identity: 643
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 53

Conread position: 5-850
Cow position:
Alignm length: 874
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 211

Conread position: 6-843
Cow position:
Alignm length: 863
Alignm identity: 646
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 238

Conread position: 7-328
Cow position:
Alignm length: 336
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 160

Conread position: 7-388
Cow position:
Alignm length: 391
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 232

Conread position: 7-724
Cow position:
Alignm length: 736
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 117

Conread position: 7-850
Cow position:
Alignm length: 869
Alignm identity: 658
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 163

Conread position: 7-850
Cow position:
Alignm length: 868
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 239

Conread position: 8-850
Cow position:
Alignm length: 868
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 236

Conread position: 11-848
Cow position:
Alignm length: 863
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 228

Conread position: 12-287
Cow position:
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 232

Conread position: 14-850
Cow position:
Alignm length: 862
Alignm identity: 643
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 225

Conread position: 17-414
Cow position:
Alignm length: 411
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 135

Conread position: 19-774
Cow position:
Alignm length: 788
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 257

Conread position: 23-771
Cow position:
Alignm length: 763
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 137

Conread position: 24-347
Cow position:
Alignm length: 336
Alignm identity: 235
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 58, 80

Conread position: 26-520
Cow position:
Alignm length: 505
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 213

Conread position: 31-850
Cow position:
Alignm length: 845
Alignm identity: 653
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 213

Conread position: 31-850
Cow position:
Alignm length: 843
Alignm identity: 632
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 211

Conread position: 39-584
Cow position:
Alignm length: 556
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 205

Conread position: 45-850
Cow position:
Alignm length: 838
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 194

Conread position: 52-850
Cow position:
Alignm length: 824
Alignm identity: 635
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 192

Conread position: 56-370
Cow position:
Alignm length: 324
Alignm identity: 225
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 43, 179

Conread position: 60-840
Cow position:
Alignm length: 819
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 15

Conread position: 68-308
Cow position:
Alignm length: 247
Alignm identity: 168
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 23

Conread position: 72-850
Cow position:
Alignm length: 804
Alignm identity: 613
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 167

Conread position: 76-636
Cow position:
Alignm length: 576
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 163

Conread position: 83-846
Cow position:
Alignm length: 791
Alignm identity: 592
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 87

Conread position: 83-850
Cow position:
Alignm length: 798
Alignm identity: 587
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 157

Conread position: 95-747
Cow position:
Alignm length: 660
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 142

Conread position: 101-846
Cow position:
Alignm length: 764
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 35

Conread position: 102-434
Cow position:
Alignm length: 340
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 19

Conread position: 102-459
Cow position:
Alignm length: 364
Alignm identity: 217
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 17, 75

Conread position: 102-850
Cow position:
Alignm length: 774
Alignm identity: 546
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 140

Conread position: 103-584
Cow position:
Alignm length: 488
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 137

Conread position: 103-850
Cow position:
Alignm length: 769
Alignm identity: 578
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 63

Conread position: 104-735
Cow position:
Alignm length: 647
Alignm identity: 487
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 119

Conread position: 110-307
Cow position:
Alignm length: 202
Alignm identity: 151
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 71, 130

Conread position: 121-287
Cow position:
Alignm length: 172
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 60, 119

Conread position: 125-325
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 56, 115

Conread position: 148-579
Cow position:
Alignm length: 443
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 142

Conread position: 149-850
Cow position:
Alignm length: 723
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 86

Conread position: 158-850
Cow position:
Alignm length: 713
Alignm identity: 543
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 82

Conread position: 173-338
Cow position:
Alignm length: 167
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 147, 58

Conread position: 181-467
Cow position:
Alignm length: 288
Alignm identity: 213
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 270, 50

Conread position: 181-751
Cow position:
Alignm length: 577
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 52

Conread position: 182-847
Cow position:
Alignm length: 690
Alignm identity: 446
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 37

Conread position: 195-351
Cow position:
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 98, 39

Conread position: 198-474
Cow position:
Alignm length: 279
Alignm identity: 193
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 149, 38

Conread position: 204-702
Cow position:
Alignm length: 508
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 30

Conread position: 233-714
Cow position:
Alignm length: 489
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 51

Conread position: 236-506
Cow position:
Alignm length: 271
Alignm identity: 196
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 151, 0

Conread position: 236-848
Cow position:
Alignm length: 623
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 47

Conread position: 238-850
Cow position:
Alignm length: 630
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 44

Conread position: 241-671
Cow position:
Alignm length: 441
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 42

Conread position: 243-459
Cow position:
Alignm length: 219
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 39

Conread position: 249-850
Cow position:
Alignm length: 628
Alignm identity: 447
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 34

Conread position: 257-843
Cow position:
Alignm length: 607
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 26

Conread position: 267-403
Cow position:
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 16

Show alignments to all cow chromosomes.