Cow genome map

Conread name: Utr1-UTR010044B01

Conread position: 1-225
Cow position: chr3:13036332-13036564 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 178
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 98, 0

Conread position: 1-225
Cow position: chr3:19214991-19215227 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 185
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 100, 0

Conread position: 1-225
Cow position: chr3:19718893-19718668 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 114, 91

Conread position: 1-260
Cow position: chr3:48525383-48525647 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 238

Conread position: 1-264
Cow position: chr3:50204187-50204456 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 201
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 99, 239

Conread position: 1-274
Cow position: chr3:34028297-34028017 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 158

Conread position: 1-274
Cow position: chr3:39855873-39856150 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 36

Conread position: 1-280
Cow position: chr3:31396040-31396322 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 234

Conread position: 1-288
Cow position: chr3:33470258-33469967 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 210
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 81, 54

Conread position: 1-293
Cow position: chr3:4162321-4162013 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 254

Conread position: 1-293
Cow position: chr3:35619228-35619523 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-293
Cow position: chr3:36516999-36516704 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 102, 80

Conread position: 1-294
Cow position: chr3:82888647-82888936 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 199
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 98, 132

Conread position: 1-310
Cow position: chr3:36120526-36120839 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-311
Cow position: chr3:12666883-12667194 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 125

Conread position: 1-322
Cow position: chr3:49453641-49453961 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 39

Conread position: 1-328
Cow position: chr3:59864197-59864527 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-349
Cow position: chr3:34458224-34457871 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-353
Cow position: chr3:14862847-14863218 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 56

Conread position: 1-359
Cow position: chr3:2868118-2867756 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-373
Cow position: chr3:20889001-20888635 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 269
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 36, 79

Conread position: 1-391
Cow position: chr3:55894469-55894861 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 269
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 98, 17

Conread position: 1-397
Cow position: chr3:5886141-5886542 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-403
Cow position: chr3:34347438-34347031 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-404
Cow position: chr3:27921090-27921501 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 65

Conread position: 1-409
Cow position: chr3:36594468-36594878 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 160

Conread position: 1-414
Cow position: chr3:41082805-41083223 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 237

Conread position: 1-423
Cow position: chr3:34014984-34015411 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-431
Cow position: chr3:12664575-12665010 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-440
Cow position: chr3:15987628-15988073 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-460
Cow position: chr3:79592784-79593251 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 241

Conread position: 1-464
Cow position: chr3:32413047-32412578 (view UCSC Genome Browser custom track)
Alignm length: 474
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-473
Cow position: chr3:41207954-41207477 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 34

Conread position: 1-504
Cow position: chr3:42748081-42747571 (view UCSC Genome Browser custom track)
Alignm length: 515
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 244

Conread position: 1-514
Cow position: chr3:5497794-5497279 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 395
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 241

Conread position: 1-517
Cow position: chr3:6875629-6875117 (view UCSC Genome Browser custom track)
Alignm length: 527
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 80

Conread position: 1-560
Cow position: chr3:65177652-65178216 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 235

Conread position: 1-588
Cow position: chr3:32620399-32619811 (view UCSC Genome Browser custom track)
Alignm length: 598
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-588
Cow position: chr3:32837991-32838587 (view UCSC Genome Browser custom track)
Alignm length: 606
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 296

Conread position: 1-602
Cow position: chr3:2920889-2921512 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 465
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 74

Conread position: 1-603
Cow position: chr3:3060499-3061102 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 452
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 154

Conread position: 1-619
Cow position: chr3:6713651-6714280 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 205

Conread position: 1-648
Cow position: chr3:22338550-22339208 (view UCSC Genome Browser custom track)
Alignm length: 664
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-648
Cow position: chr3:40285674-40285017 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-648
Cow position: chr3:57554411-57555070 (view UCSC Genome Browser custom track)
Alignm length: 670
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 235

Conread position: 1-648
Cow position: chr3:63000719-63000080 (view UCSC Genome Browser custom track)
Alignm length: 663
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 246

Conread position: 1-673
Cow position: chr3:56337312-56336651 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 504
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 238

Conread position: 1-674
Cow position: chr3:31121502-31120809 (view UCSC Genome Browser custom track)
Alignm length: 698
Alignm identity: 512
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-681
Cow position: chr3:21004456-21005151 (view UCSC Genome Browser custom track)
Alignm length: 705
Alignm identity: 526
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 238

Conread position: 1-688
Cow position: chr3:1033504-1034205 (view UCSC Genome Browser custom track)
Alignm length: 706
Alignm identity: 527
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-718
Cow position: chr3:74848506-74847808 (view UCSC Genome Browser custom track)
Alignm length: 728
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 88

Conread position: 1-719
Cow position: chr3:62882005-62882726 (view UCSC Genome Browser custom track)
Alignm length: 729
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 134

Conread position: 1-735
Cow position: chr3:29574478-29573738 (view UCSC Genome Browser custom track)
Alignm length: 755
Alignm identity: 563
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 58

Conread position: 1-736
Cow position: chr3:27246045-27245303 (view UCSC Genome Browser custom track)
Alignm length: 754
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 134

Conread position: 1-749
Cow position: chr3:26751529-26750808 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 160

Conread position: 1-751
Cow position: chr3:63148996-63148235 (view UCSC Genome Browser custom track)
Alignm length: 775
Alignm identity: 539
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 15

Conread position: 1-768
Cow position: chr3:56719684-56718909 (view UCSC Genome Browser custom track)
Alignm length: 786
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 135

Conread position: 1-776
Cow position: chr3:77726145-77726872 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 97

Conread position: 1-784
Cow position: chr3:34087549-34086761 (view UCSC Genome Browser custom track)
Alignm length: 807
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 50

Conread position: 1-788
Cow position: chr3:21026762-21025964 (view UCSC Genome Browser custom track)
Alignm length: 819
Alignm identity: 529
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 85

Conread position: 1-800
Cow position: chr3:23287693-23286878 (view UCSC Genome Browser custom track)
Alignm length: 822
Alignm identity: 622
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 238

Conread position: 1-800
Cow position: chr3:46858641-46857825 (view UCSC Genome Browser custom track)
Alignm length: 822
Alignm identity: 621
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-800
Cow position: chr3:54087711-54086927 (view UCSC Genome Browser custom track)
Alignm length: 818
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 110

Conread position: 1-829
Cow position: chr3:25689295-25690136 (view UCSC Genome Browser custom track)
Alignm length: 853
Alignm identity: 643
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 240

Conread position: 1-837
Cow position: chr3:42994241-42993381 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 14

Conread position: 1-837
Cow position: chr3:50920677-50921535 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 639
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 65

Conread position: 1-838
Cow position: chr3:52689407-52690236 (view UCSC Genome Browser custom track)
Alignm length: 857
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 182, 38

Conread position: 1-840
Cow position: chr3:18814149-18815007 (view UCSC Genome Browser custom track)
Alignm length: 864
Alignm identity: 676
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 39

Conread position: 1-840
Cow position: chr3:23205030-23204176 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 658
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 31

Conread position: 1-842
Cow position: chr3:32220383-32221212 (view UCSC Genome Browser custom track)
Alignm length: 855
Alignm identity: 617
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 55

Conread position: 1-846
Cow position: chr3:31418174-31419034 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 159

Conread position: 1-846
Cow position: chr3:78024788-78023932 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 241

Conread position: 1-847
Cow position: chr3:83290294-83289438 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 588
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 66

Conread position: 1-848
Cow position: chr3:14452300-14453162 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 627
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 244

Conread position: 1-848
Cow position: chr3:15656645-15655807 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 242

Conread position: 1-848
Cow position: chr3:24573517-24572659 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 648
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 148

Conread position: 1-848
Cow position: chr3:38251507-38252332 (view UCSC Genome Browser custom track)
Alignm length: 863
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 181, 53

Conread position: 1-848
Cow position: chr3:49463910-49463061 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 642
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 232

Conread position: 1-849
Cow position: chr3:6837691-6838540 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 182

Conread position: 1-849
Cow position: chr3:11510201-11509353 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 568
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 184

Conread position: 1-849
Cow position: chr3:83766895-83767756 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position: chr3:596763-597610 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 644
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 80

Conread position: 1-850
Cow position: chr3:3653641-3652795 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 646
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 39

Conread position: 1-850
Cow position: chr3:4030389-4031259 (view UCSC Genome Browser custom track)
Alignm length: 888
Alignm identity: 630
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 158

Conread position: 1-850
Cow position: chr3:6864309-6865161 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 674
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position: chr3:6896484-6897337 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 615
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 173

Conread position: 1-850
Cow position: chr3:10243303-10244171 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 243

Conread position: 1-850
Cow position: chr3:13724070-13723200 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 674
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 128

Conread position: 1-850
Cow position: chr3:15416108-15416978 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position: chr3:16225523-16226386 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 670
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 158

Conread position: 1-850
Cow position: chr3:17938360-17937507 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 605
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position: chr3:18759776-18758893 (view UCSC Genome Browser custom track)
Alignm length: 896
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 150

Conread position: 1-850
Cow position: chr3:18862084-18862949 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 672
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 17

Conread position: 1-850
Cow position: chr3:19941535-19942394 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 646
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 161

Conread position: 1-850
Cow position: chr3:20380075-20379207 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 236

Conread position: 1-850
Cow position: chr3:21179614-21178745 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 674
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 160

Conread position: 1-850
Cow position: chr3:22725127-22724272 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 642
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 239

Conread position: 1-850
Cow position: chr3:23010014-23010863 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 655
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 240

Conread position: 1-850
Cow position: chr3:24264845-24265709 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 37

Conread position: 1-850
Cow position: chr3:24443452-24442595 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 672
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position: chr3:26743229-26742365 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 240

Conread position: 1-850
Cow position: chr3:27222695-27223527 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 65

Conread position: 1-850
Cow position: chr3:29129733-29130601 (view UCSC Genome Browser custom track)
Alignm length: 881
Alignm identity: 637
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 39

Conread position: 1-850
Cow position: chr3:30320905-30321756 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 181

Conread position: 1-850
Cow position: chr3:30616295-30615432 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 1-850
Cow position: chr3:31021325-31022186 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 241

Conread position: 1-850
Cow position: chr3:33326024-33326894 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 637
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 80

Conread position: 1-850
Cow position: chr3:34504481-34503627 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position: chr3:35611796-35612659 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 653
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position: chr3:37971686-37972538 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 204

Conread position: 1-850
Cow position: chr3:38869216-38870077 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 247

Conread position: 1-850
Cow position: chr3:40048531-40049400 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 675
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position: chr3:43526097-43525228 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr3:46505410-46506280 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-850
Cow position: chr3:47078972-47078101 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position: chr3:49542559-49541696 (view UCSC Genome Browser custom track)
Alignm length: 882
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position: chr3:49563652-49564528 (view UCSC Genome Browser custom track)
Alignm length: 881
Alignm identity: 676
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 247

Conread position: 1-850
Cow position: chr3:49611566-49610699 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 240

Conread position: 1-850
Cow position: chr3:49908370-49907523 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 639
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 123

Conread position: 1-850
Cow position: chr3:49998780-49999648 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr3:50460991-50461810 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 607
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 128

Conread position: 1-850
Cow position: chr3:53880625-53879754 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr3:56485618-56484743 (view UCSC Genome Browser custom track)
Alignm length: 880
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position: chr3:56645689-56644819 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 244

Conread position: 1-850
Cow position: chr3:57482083-57481234 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 645
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 98

Conread position: 1-850
Cow position: chr3:57742169-57743021 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 650
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 66

Conread position: 1-850
Cow position: chr3:64653309-64654179 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 245

Conread position: 1-850
Cow position: chr3:66622857-66623697 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 639
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 90

Conread position: 1-850
Cow position: chr3:66888554-66887686 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 237

Conread position: 1-850
Cow position: chr3:66969238-66968367 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-850
Cow position: chr3:68718064-68717199 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 80

Conread position: 1-850
Cow position: chr3:68871108-68870243 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 234

Conread position: 1-850
Cow position: chr3:68889929-68889061 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 128

Conread position: 1-850
Cow position: chr3:69931192-69930325 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 672
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 240

Conread position: 1-850
Cow position: chr3:72632712-72633584 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 682
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position: chr3:72669913-72669049 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 650
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 81

Conread position: 1-850
Cow position: chr3:74060116-74060979 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 677
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr3:75039203-75038330 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 679
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 246

Conread position: 1-850
Cow position: chr3:76001313-76000449 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 238

Conread position: 1-850
Cow position: chr3:81100728-81101590 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 170

Conread position: 2-243
Cow position: chr3:48210852-48211098 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 172
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 121

Conread position: 2-454
Cow position: chr3:32326780-32326326 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 248

Conread position: 2-535
Cow position: chr3:48845649-48846187 (view UCSC Genome Browser custom track)
Alignm length: 543
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 232

Conread position: 2-675
Cow position: chr3:63239370-63238707 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 496
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 233

Conread position: 2-850
Cow position: chr3:2708227-2707363 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 238

Conread position: 2-850
Cow position: chr3:14467234-14466355 (view UCSC Genome Browser custom track)
Alignm length: 892
Alignm identity: 640
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 83

Conread position: 2-850
Cow position: chr3:45185322-45184489 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 22

Conread position: 2-850
Cow position: chr3:48602894-48603772 (view UCSC Genome Browser custom track)
Alignm length: 883
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 242

Conread position: 3-289
Cow position: chr3:50124352-50124074 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 209
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 93, 63

Conread position: 5-222
Cow position: chr3:63689600-63689375 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 5-293
Cow position: chr3:69963163-69962876 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 228
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 23

Conread position: 5-315
Cow position: chr3:35972740-35973063 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 242

Conread position: 5-848
Cow position: chr3:45692372-45691550 (view UCSC Genome Browser custom track)
Alignm length: 857
Alignm identity: 590
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 40

Conread position: 5-850
Cow position: chr3:16294263-16293403 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 5-850
Cow position: chr3:24586586-24585716 (view UCSC Genome Browser custom track)
Alignm length: 884
Alignm identity: 653
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 134

Conread position: 5-850
Cow position: chr3:24638057-24638913 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 642
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 70

Conread position: 5-850
Cow position: chr3:43190624-43189761 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 670
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 239

Conread position: 5-850
Cow position: chr3:48361593-48362432 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 595
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 129

Conread position: 6-483
Cow position: chr3:29644004-29644494 (view UCSC Genome Browser custom track)
Alignm length: 505
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 24

Conread position: 6-843
Cow position: chr3:9404580-9403761 (view UCSC Genome Browser custom track)
Alignm length: 846
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 61

Conread position: 6-850
Cow position: chr3:1482681-1483531 (view UCSC Genome Browser custom track)
Alignm length: 863
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 194

Conread position: 6-850
Cow position: chr3:45977150-45978011 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 234

Conread position: 6-850
Cow position: chr3:53048133-53047290 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 648
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 24

Conread position: 7-615
Cow position: chr3:19798504-19797884 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 232

Conread position: 7-850
Cow position: chr3:5474208-5475051 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 645
Alignm E-value: 0
Alignm gaps (pig, cow): 172, 81

Conread position: 7-850
Cow position: chr3:7246455-7245597 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 68

Conread position: 7-850
Cow position: chr3:19883124-19883970 (view UCSC Genome Browser custom track)
Alignm length: 864
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 47

Conread position: 7-850
Cow position: chr3:40337495-40336634 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 663
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 232

Conread position: 7-850
Cow position: chr3:44926470-44927325 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 25

Conread position: 7-850
Cow position: chr3:56297032-56297896 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 231

Conread position: 8-465
Cow position: chr3:72389621-72390068 (view UCSC Genome Browser custom track)
Alignm length: 468
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 232

Conread position: 9-847
Cow position: chr3:51489971-51490804 (view UCSC Genome Browser custom track)
Alignm length: 860
Alignm identity: 569
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 16

Conread position: 10-308
Cow position: chr3:6441314-6441616 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 225

Conread position: 10-429
Cow position: chr3:19795558-19795147 (view UCSC Genome Browser custom track)
Alignm length: 425
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 54

Conread position: 10-710
Cow position: chr3:37280046-37280759 (view UCSC Genome Browser custom track)
Alignm length: 718
Alignm identity: 500
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 234

Conread position: 10-747
Cow position: chr3:27783630-27782929 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 82

Conread position: 10-848
Cow position: chr3:39555933-39555090 (view UCSC Genome Browser custom track)
Alignm length: 864
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 151

Conread position: 10-850
Cow position: chr3:7477270-7476410 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 234

Conread position: 10-850
Cow position: chr3:40826048-40826908 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 234

Conread position: 10-850
Cow position: chr3:68697316-68696463 (view UCSC Genome Browser custom track)
Alignm length: 864
Alignm identity: 653
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 231

Conread position: 11-233
Cow position: chr3:63201696-63201906 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 11-391
Cow position: chr3:18461487-18461099 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 234

Conread position: 11-519
Cow position: chr3:67545934-67545436 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 400
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 219

Conread position: 12-503
Cow position: chr3:11182295-11181809 (view UCSC Genome Browser custom track)
Alignm length: 502
Alignm identity: 325
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 88, 110

Conread position: 13-849
Cow position: chr3:61677195-61678043 (view UCSC Genome Browser custom track)
Alignm length: 863
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 190

Conread position: 14-403
Cow position: chr3:36402255-36402654 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 223

Conread position: 14-438
Cow position: chr3:10370656-10371078 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 221

Conread position: 14-850
Cow position: chr3:19754073-19753224 (view UCSC Genome Browser custom track)
Alignm length: 862
Alignm identity: 670
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 230

Conread position: 15-846
Cow position: chr3:77426374-77427175 (view UCSC Genome Browser custom track)
Alignm length: 851
Alignm identity: 626
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 36

Conread position: 19-724
Cow position: chr3:19946881-19947578 (view UCSC Genome Browser custom track)
Alignm length: 725
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 223

Conread position: 19-848
Cow position: chr3:19108226-19109072 (view UCSC Genome Browser custom track)
Alignm length: 861
Alignm identity: 596
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 127

Conread position: 20-848
Cow position: chr3:56100940-56101760 (view UCSC Genome Browser custom track)
Alignm length: 854
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 23

Conread position: 27-848
Cow position: chr3:27866327-27867162 (view UCSC Genome Browser custom track)
Alignm length: 851
Alignm identity: 628
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 177

Conread position: 31-850
Cow position: chr3:227203-226380 (view UCSC Genome Browser custom track)
Alignm length: 844
Alignm identity: 633
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 213

Conread position: 34-473
Cow position: chr3:41314754-41315195 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 11

Conread position: 38-425
Cow position: chr3:53518515-53518907 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 206

Conread position: 40-382
Cow position: chr3:80817297-80817651 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 229
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 59, 259

Conread position: 40-525
Cow position: chr3:66651644-66651168 (view UCSC Genome Browser custom track)
Alignm length: 498
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 41

Conread position: 41-505
Cow position: chr3:77706508-77706979 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 198

Conread position: 44-465
Cow position: chr3:58128744-58129161 (view UCSC Genome Browser custom track)
Alignm length: 439
Alignm identity: 294
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 55, 26

Conread position: 45-850
Cow position: chr3:36875381-36874549 (view UCSC Genome Browser custom track)
Alignm length: 838
Alignm identity: 633
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 189

Conread position: 46-625
Cow position: chr3:522808-523367 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 216

Conread position: 46-680
Cow position: chr3:74850459-74849813 (view UCSC Genome Browser custom track)
Alignm length: 658
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 91

Conread position: 48-850
Cow position: chr3:49605750-49604935 (view UCSC Genome Browser custom track)
Alignm length: 825
Alignm identity: 630
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 196

Conread position: 49-837
Cow position: chr3:64170922-64171728 (view UCSC Genome Browser custom track)
Alignm length: 827
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 33

Conread position: 50-850
Cow position: chr3:56147979-56148804 (view UCSC Genome Browser custom track)
Alignm length: 828
Alignm identity: 620
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 232

Conread position: 52-353
Cow position: chr3:62794580-62794272 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 216
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 47, 197

Conread position: 55-589
Cow position: chr3:14053969-14054508 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 189

Conread position: 55-850
Cow position: chr3:2866959-2866143 (view UCSC Genome Browser custom track)
Alignm length: 821
Alignm identity: 619
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 184

Conread position: 56-848
Cow position: chr3:58208154-58207350 (view UCSC Genome Browser custom track)
Alignm length: 827
Alignm identity: 536
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 69

Conread position: 59-735
Cow position: chr3:1740172-1739483 (view UCSC Genome Browser custom track)
Alignm length: 695
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 91

Conread position: 59-850
Cow position: chr3:54568734-54569504 (view UCSC Genome Browser custom track)
Alignm length: 805
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 8

Conread position: 60-850
Cow position: chr3:58950161-58950970 (view UCSC Genome Browser custom track)
Alignm length: 816
Alignm identity: 605
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 174

Conread position: 61-850
Cow position: chr3:76864133-76864943 (view UCSC Genome Browser custom track)
Alignm length: 815
Alignm identity: 617
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 183

Conread position: 63-580
Cow position: chr3:45567914-45568458 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 176

Conread position: 63-850
Cow position: chr3:38095603-38096412 (view UCSC Genome Browser custom track)
Alignm length: 815
Alignm identity: 611
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 90

Conread position: 65-735
Cow position: chr3:32491007-32490323 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 518
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 179

Conread position: 65-850
Cow position: chr3:26992835-26993633 (view UCSC Genome Browser custom track)
Alignm length: 805
Alignm identity: 585
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 16

Conread position: 74-850
Cow position: chr3:57455687-57456460 (view UCSC Genome Browser custom track)
Alignm length: 798
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 139

Conread position: 76-435
Cow position: chr3:2852764-2852393 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 47

Conread position: 82-561
Cow position: chr3:63277130-63276656 (view UCSC Genome Browser custom track)
Alignm length: 491
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 69

Conread position: 84-850
Cow position: chr3:21593009-21593793 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 155

Conread position: 86-771
Cow position: chr3:63736119-63736821 (view UCSC Genome Browser custom track)
Alignm length: 709
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 144

Conread position: 86-800
Cow position: chr3:61173224-61173949 (view UCSC Genome Browser custom track)
Alignm length: 735
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 75

Conread position: 86-847
Cow position: chr3:31934606-31933830 (view UCSC Genome Browser custom track)
Alignm length: 787
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 146

Conread position: 86-848
Cow position: chr3:50112291-50111546 (view UCSC Genome Browser custom track)
Alignm length: 784
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 55

Conread position: 100-765
Cow position: chr3:54654436-54653756 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 188

Conread position: 102-288
Cow position: chr3:21103047-21102860 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 60, 8

Conread position: 102-473
Cow position: chr3:49253260-49253631 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 185

Conread position: 102-850
Cow position: chr3:53413783-53414524 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 505
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 128

Conread position: 102-850
Cow position: chr3:58034898-58034156 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 554
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 145

Conread position: 103-368
Cow position: chr3:55245087-55245353 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 197
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 78, 137

Conread position: 106-829
Cow position: chr3:46224649-46225371 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 131

Conread position: 106-850
Cow position: chr3:3837834-3837096 (view UCSC Genome Browser custom track)
Alignm length: 763
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 134

Conread position: 107-850
Cow position: chr3:65988671-65989418 (view UCSC Genome Browser custom track)
Alignm length: 764
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 137

Conread position: 108-296
Cow position: chr3:65084144-65084332 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 132

Conread position: 118-849
Cow position: chr3:37627658-37628393 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 134

Conread position: 121-847
Cow position: chr3:60178325-60177603 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 36

Conread position: 121-850
Cow position: chr3:2366124-2365405 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 547
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 114

Conread position: 122-850
Cow position: chr3:5951849-5951114 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 555
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 118

Conread position: 124-509
Cow position: chr3:14881753-14881367 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 254
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 63, 125

Conread position: 125-473
Cow position: chr3:77273022-77272676 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 106

Conread position: 125-849
Cow position: chr3:2904669-2903945 (view UCSC Genome Browser custom track)
Alignm length: 742
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 111

Conread position: 126-850
Cow position: chr3:37893604-37894341 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 566
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 114

Conread position: 131-570
Cow position: chr3:5446136-5445700 (view UCSC Genome Browser custom track)
Alignm length: 447
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 103

Conread position: 131-712
Cow position: chr3:68510560-68509972 (view UCSC Genome Browser custom track)
Alignm length: 593
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 104

Conread position: 134-740
Cow position: chr3:42977805-42977198 (view UCSC Genome Browser custom track)
Alignm length: 620
Alignm identity: 454
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 101

Conread position: 134-850
Cow position: chr3:7856203-7856933 (view UCSC Genome Browser custom track)
Alignm length: 740
Alignm identity: 549
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 107

Conread position: 136-850
Cow position: chr3:64376927-64376204 (view UCSC Genome Browser custom track)
Alignm length: 736
Alignm identity: 559
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 29

Conread position: 137-848
Cow position: chr3:40344020-40344731 (view UCSC Genome Browser custom track)
Alignm length: 722
Alignm identity: 477
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 89

Conread position: 137-850
Cow position: chr3:18886247-18886969 (view UCSC Genome Browser custom track)
Alignm length: 734
Alignm identity: 545
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 94

Conread position: 148-850
Cow position: chr3:19880844-19881561 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 87

Conread position: 149-850
Cow position: chr3:3552118-3552827 (view UCSC Genome Browser custom track)
Alignm length: 716
Alignm identity: 538
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 86

Conread position: 152-850
Cow position: chr3:47273078-47272367 (view UCSC Genome Browser custom track)
Alignm length: 717
Alignm identity: 537
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 30

Conread position: 163-545
Cow position: chr3:28093944-28094329 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 72

Conread position: 164-720
Cow position: chr3:2790560-2791122 (view UCSC Genome Browser custom track)
Alignm length: 570
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 79

Conread position: 166-850
Cow position: chr3:66830127-66829437 (view UCSC Genome Browser custom track)
Alignm length: 702
Alignm identity: 520
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 35

Conread position: 167-850
Cow position: chr3:14679903-14680593 (view UCSC Genome Browser custom track)
Alignm length: 701
Alignm identity: 533
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 60

Conread position: 174-850
Cow position: chr3:28435876-28435193 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 57

Conread position: 176-850
Cow position: chr3:6528817-6529504 (view UCSC Genome Browser custom track)
Alignm length: 692
Alignm identity: 535
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 60

Conread position: 180-850
Cow position: chr3:12798222-12797550 (view UCSC Genome Browser custom track)
Alignm length: 690
Alignm identity: 513
Alignm E-value: 0
Alignm gaps (pig, cow): 153, 47

Conread position: 181-422
Cow position: chr3:64025489-64025249 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 149, 50

Conread position: 181-451
Cow position: chr3:50941403-50941670 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 52

Conread position: 181-727
Cow position: chr3:35342480-35343032 (view UCSC Genome Browser custom track)
Alignm length: 557
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 181-846
Cow position: chr3:55373920-55374587 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 493
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 50

Conread position: 181-850
Cow position: chr3:944525-945206 (view UCSC Genome Browser custom track)
Alignm length: 689
Alignm identity: 458
Alignm E-value: 0
Alignm gaps (pig, cow): 271, 53

Conread position: 181-850
Cow position: chr3:2572357-2573039 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 181-850
Cow position: chr3:2834709-2834027 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 528
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 181-850
Cow position: chr3:7155977-7155295 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 531
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 53

Conread position: 181-850
Cow position: chr3:20795123-20795805 (view UCSC Genome Browser custom track)
Alignm length: 687
Alignm identity: 532
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 46

Conread position: 182-584
Cow position: chr3:32703328-32702945 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 273
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 271, 45

Conread position: 182-850
Cow position: chr3:14284565-14285238 (view UCSC Genome Browser custom track)
Alignm length: 683
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 51

Conread position: 183-721
Cow position: chr3:76187364-76187914 (view UCSC Genome Browser custom track)
Alignm length: 558
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 48

Conread position: 185-850
Cow position: chr3:823257-822578 (view UCSC Genome Browser custom track)
Alignm length: 684
Alignm identity: 523
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 46

Conread position: 185-850
Cow position: chr3:43084076-43084734 (view UCSC Genome Browser custom track)
Alignm length: 675
Alignm identity: 517
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 51

Conread position: 190-841
Cow position: chr3:24530541-24531178 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 37

Conread position: 194-428
Cow position: chr3:36614385-36614155 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 174
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 139, 19

Conread position: 195-382
Cow position: chr3:57835747-57835563 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 138, 36

Conread position: 195-441
Cow position: chr3:49429624-49429865 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 138, 39

Conread position: 195-535
Cow position: chr3:12987172-12986834 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 41

Conread position: 195-735
Cow position: chr3:33269082-33269613 (view UCSC Genome Browser custom track)
Alignm length: 550
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 258, 41

Conread position: 195-741
Cow position: chr3:49134691-49134142 (view UCSC Genome Browser custom track)
Alignm length: 556
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 141, 10

Conread position: 195-848
Cow position: chr3:64317584-64318246 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 490
Alignm E-value: 0
Alignm gaps (pig, cow): 247, 41

Conread position: 195-850
Cow position: chr3:77225579-77226229 (view UCSC Genome Browser custom track)
Alignm length: 673
Alignm identity: 468
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 27

Conread position: 198-809
Cow position: chr3:73636728-73637346 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 28

Conread position: 198-850
Cow position: chr3:35885268-35884610 (view UCSC Genome Browser custom track)
Alignm length: 674
Alignm identity: 499
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 39

Conread position: 199-778
Cow position: chr3:3983960-3984540 (view UCSC Genome Browser custom track)
Alignm length: 594
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 244, 28

Conread position: 202-425
Cow position: chr3:53388750-53388528 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 164
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 131, 18

Conread position: 202-449
Cow position: chr3:60142871-60143110 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 131, 32

Conread position: 202-850
Cow position: chr3:52150435-52149774 (view UCSC Genome Browser custom track)
Alignm length: 666
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 131, 34

Conread position: 214-735
Cow position: chr3:45311656-45312168 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 14

Conread position: 218-472
Cow position: chr3:68402815-68402558 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 179
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 17, 7

Conread position: 230-735
Cow position: chr3:21016911-21016409 (view UCSC Genome Browser custom track)
Alignm length: 521
Alignm identity: 342
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 20, 53

Conread position: 233-635
Cow position: chr3:34027998-34027587 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 52

Conread position: 235-584
Cow position: chr3:52664281-52664626 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 235
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 58, 119

Conread position: 235-846
Cow position: chr3:15809404-15809992 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 384
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 285, 48

Conread position: 236-469
Cow position: chr3:29578753-29578519 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 236-508
Cow position: chr3:52451298-52451570 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 191
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 140, 56

Conread position: 236-848
Cow position: chr3:70914383-70913754 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 48

Conread position: 236-849
Cow position: chr3:30938382-30939012 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 236-850
Cow position: chr3:40521058-40520428 (view UCSC Genome Browser custom track)
Alignm length: 632
Alignm identity: 492
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 239-662
Cow position: chr3:44100933-44101369 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 13

Conread position: 241-838
Cow position: chr3:63689003-63688412 (view UCSC Genome Browser custom track)
Alignm length: 617
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 42

Conread position: 242-765
Cow position: chr3:80307123-80307641 (view UCSC Genome Browser custom track)
Alignm length: 531
Alignm identity: 316
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 54

Conread position: 243-849
Cow position: chr3:65473319-65473938 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 479
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 35

Conread position: 250-850
Cow position: chr3:11417442-11418058 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 33

Conread position: 272-848
Cow position: chr3:31224197-31224795 (view UCSC Genome Browser custom track)
Alignm length: 602
Alignm identity: 439
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 21

Conread position: 283-746
Cow position: chr3:38862663-38863119 (view UCSC Genome Browser custom track)
Alignm length: 476
Alignm identity: 336
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 72

Conread position: 287-800
Cow position: chr3:39327480-39327997 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 216

Conread position: 302-712
Cow position: chr3:30908754-30909183 (view UCSC Genome Browser custom track)
Alignm length: 436
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 43

Conread position: 304-426
Cow position: chr3:22281522-22281399 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 29, 55

Conread position: 304-774
Cow position: chr3:27454984-27454505 (view UCSC Genome Browser custom track)
Alignm length: 480
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.