Cow genome map

Conread name: Utr1-UTR010044B01

Conread position: 1-225
Cow position: chr6:33810477-33810709 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 177
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 98, 0

Conread position: 1-225
Cow position: chr6:52194283-52194051 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 183
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 99, 150

Conread position: 1-225
Cow position: chr6:65905608-65905379 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 167
Alignm E-value: 9e-36
Alignm gaps (pig, cow): 100, 0

Conread position: 1-237
Cow position: chr6:27527300-27527058 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 80

Conread position: 1-257
Cow position: chr6:28400565-28400304 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 197
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 98, 238

Conread position: 1-275
Cow position: chr6:13849759-13850037 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 203
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 98, 139

Conread position: 1-275
Cow position: chr6:39435235-39434953 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 216
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 70, 243

Conread position: 1-293
Cow position: chr6:24624710-24624411 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 261

Conread position: 1-310
Cow position: chr6:21711247-21711560 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-319
Cow position: chr6:2377390-2377712 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-328
Cow position: chr6:14133057-14132726 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 240

Conread position: 1-328
Cow position: chr6:35824534-35824863 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 90

Conread position: 1-344
Cow position: chr6:35967780-35967432 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-361
Cow position: chr6:12971231-12970871 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 147

Conread position: 1-401
Cow position: chr6:66277119-66277532 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 163

Conread position: 1-410
Cow position: chr6:51876517-51876924 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 20

Conread position: 1-412
Cow position: chr6:8756131-8755715 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 321
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-423
Cow position: chr6:1275302-1274877 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 162

Conread position: 1-431
Cow position: chr6:43778205-43778639 (view UCSC Genome Browser custom track)
Alignm length: 440
Alignm identity: 331
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 234

Conread position: 1-442
Cow position: chr6:22679541-22679987 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-449
Cow position: chr6:6474751-6474308 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 227

Conread position: 1-449
Cow position: chr6:45591234-45591687 (view UCSC Genome Browser custom track)
Alignm length: 458
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-461
Cow position: chr6:27761391-27761854 (view UCSC Genome Browser custom track)
Alignm length: 473
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 49

Conread position: 1-473
Cow position: chr6:62577496-62577018 (view UCSC Genome Browser custom track)
Alignm length: 483
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-481
Cow position: chr6:1819111-1818628 (view UCSC Genome Browser custom track)
Alignm length: 490
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 60

Conread position: 1-502
Cow position: chr6:50720784-50721289 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 238

Conread position: 1-504
Cow position: chr6:7191861-7191379 (view UCSC Genome Browser custom track)
Alignm length: 513
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 155

Conread position: 1-508
Cow position: chr6:25409290-25408765 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 126

Conread position: 1-509
Cow position: chr6:34129143-34129657 (view UCSC Genome Browser custom track)
Alignm length: 520
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-511
Cow position: chr6:10267406-10266889 (view UCSC Genome Browser custom track)
Alignm length: 522
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 232

Conread position: 1-514
Cow position: chr6:21975639-21976156 (view UCSC Genome Browser custom track)
Alignm length: 524
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 216

Conread position: 1-535
Cow position: chr6:17595599-17595059 (view UCSC Genome Browser custom track)
Alignm length: 545
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-547
Cow position: chr6:43790892-43790338 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-561
Cow position: chr6:8536607-8536043 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 70

Conread position: 1-561
Cow position: chr6:48875645-48875088 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 240

Conread position: 1-562
Cow position: chr6:2581104-2581654 (view UCSC Genome Browser custom track)
Alignm length: 574
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 158

Conread position: 1-584
Cow position: chr6:28488879-28488303 (view UCSC Genome Browser custom track)
Alignm length: 591
Alignm identity: 437
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 235

Conread position: 1-584
Cow position: chr6:38873973-38873386 (view UCSC Genome Browser custom track)
Alignm length: 595
Alignm identity: 455
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 222

Conread position: 1-584
Cow position: chr6:65929932-65930533 (view UCSC Genome Browser custom track)
Alignm length: 607
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 245

Conread position: 1-607
Cow position: chr6:20351403-20350785 (view UCSC Genome Browser custom track)
Alignm length: 623
Alignm identity: 463
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-609
Cow position: chr6:41408092-41408710 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 470
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 160

Conread position: 1-618
Cow position: chr6:12628587-12629202 (view UCSC Genome Browser custom track)
Alignm length: 636
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 150

Conread position: 1-622
Cow position: chr6:18497005-18497642 (view UCSC Genome Browser custom track)
Alignm length: 648
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 223

Conread position: 1-636
Cow position: chr6:33490368-33489721 (view UCSC Genome Browser custom track)
Alignm length: 652
Alignm identity: 488
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-655
Cow position: chr6:1507824-1507157 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-655
Cow position: chr6:66189114-66188447 (view UCSC Genome Browser custom track)
Alignm length: 672
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-668
Cow position: chr6:27151754-27151075 (view UCSC Genome Browser custom track)
Alignm length: 685
Alignm identity: 516
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 209

Conread position: 1-675
Cow position: chr6:11354477-11353800 (view UCSC Genome Browser custom track)
Alignm length: 696
Alignm identity: 502
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-680
Cow position: chr6:68029863-68030557 (view UCSC Genome Browser custom track)
Alignm length: 699
Alignm identity: 524
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 245

Conread position: 1-692
Cow position: chr6:51867681-51868377 (view UCSC Genome Browser custom track)
Alignm length: 708
Alignm identity: 530
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-693
Cow position: chr6:30270217-30269511 (view UCSC Genome Browser custom track)
Alignm length: 711
Alignm identity: 558
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-719
Cow position: chr6:59618752-59619495 (view UCSC Genome Browser custom track)
Alignm length: 745
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 294

Conread position: 1-727
Cow position: chr6:36230840-36230100 (view UCSC Genome Browser custom track)
Alignm length: 745
Alignm identity: 561
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-729
Cow position: chr6:41192007-41192751 (view UCSC Genome Browser custom track)
Alignm length: 748
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 291

Conread position: 1-732
Cow position: chr6:15924903-15924164 (view UCSC Genome Browser custom track)
Alignm length: 749
Alignm identity: 508
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 244

Conread position: 1-735
Cow position: chr6:43620417-43621165 (view UCSC Genome Browser custom track)
Alignm length: 753
Alignm identity: 576
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-749
Cow position: chr6:16595689-16596411 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 485
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 156

Conread position: 1-751
Cow position: chr6:37385839-37386595 (view UCSC Genome Browser custom track)
Alignm length: 768
Alignm identity: 501
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 235

Conread position: 1-753
Cow position: chr6:34844026-34843263 (view UCSC Genome Browser custom track)
Alignm length: 771
Alignm identity: 598
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 124

Conread position: 1-786
Cow position: chr6:4904288-4903512 (view UCSC Genome Browser custom track)
Alignm length: 797
Alignm identity: 608
Alignm E-value: 0
Alignm gaps (pig, cow): 180, 88

Conread position: 1-794
Cow position: chr6:10611511-10612322 (view UCSC Genome Browser custom track)
Alignm length: 820
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 13

Conread position: 1-836
Cow position: chr6:4467292-4468163 (view UCSC Genome Browser custom track)
Alignm length: 880
Alignm identity: 626
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 125

Conread position: 1-837
Cow position: chr6:916729-917597 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 655
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 243

Conread position: 1-838
Cow position: chr6:9734276-9733434 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 625
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 31

Conread position: 1-838
Cow position: chr6:31913489-31912631 (view UCSC Genome Browser custom track)
Alignm length: 863
Alignm identity: 661
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-840
Cow position: chr6:16767150-16766296 (view UCSC Genome Browser custom track)
Alignm length: 864
Alignm identity: 648
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 219

Conread position: 1-841
Cow position: chr6:3272794-3271936 (view UCSC Genome Browser custom track)
Alignm length: 866
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-841
Cow position: chr6:34504836-34503977 (view UCSC Genome Browser custom track)
Alignm length: 864
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 239

Conread position: 1-842
Cow position: chr6:41676624-41677475 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 609
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 224

Conread position: 1-843
Cow position: chr6:2876345-2875485 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 234

Conread position: 1-843
Cow position: chr6:28171589-28172462 (view UCSC Genome Browser custom track)
Alignm length: 883
Alignm identity: 644
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 235

Conread position: 1-848
Cow position: chr6:24584679-24583850 (view UCSC Genome Browser custom track)
Alignm length: 862
Alignm identity: 601
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 160

Conread position: 1-848
Cow position: chr6:28108602-28107775 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 544
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 34

Conread position: 1-848
Cow position: chr6:34493363-34494226 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 665
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 146

Conread position: 1-848
Cow position: chr6:40158819-40157982 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 586
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 58

Conread position: 1-849
Cow position: chr6:28001694-28000841 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 655
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 242

Conread position: 1-849
Cow position: chr6:28064677-28065545 (view UCSC Genome Browser custom track)
Alignm length: 873
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-849
Cow position: chr6:50570888-50571746 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 172

Conread position: 1-850
Cow position: chr6:127446-126579 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 657
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position: chr6:182857-181995 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 237

Conread position: 1-850
Cow position: chr6:328673-327807 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 658
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 240

Conread position: 1-850
Cow position: chr6:478237-479102 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 240

Conread position: 1-850
Cow position: chr6:1536396-1537250 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 644
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 171

Conread position: 1-850
Cow position: chr6:3151905-3152768 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 80

Conread position: 1-850
Cow position: chr6:3886820-3885949 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 124

Conread position: 1-850
Cow position: chr6:3927832-3928690 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 599
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 245

Conread position: 1-850
Cow position: chr6:5947089-5946219 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 23

Conread position: 1-850
Cow position: chr6:6120293-6119449 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 672
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 238

Conread position: 1-850
Cow position: chr6:7138654-7137786 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 675
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr6:7467965-7467095 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 235

Conread position: 1-850
Cow position: chr6:8204866-8205743 (view UCSC Genome Browser custom track)
Alignm length: 887
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 246

Conread position: 1-850
Cow position: chr6:10043901-10044762 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position: chr6:11019343-11020214 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 675
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 241

Conread position: 1-850
Cow position: chr6:11722509-11721660 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 653
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 241

Conread position: 1-850
Cow position: chr6:11870245-11869379 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 654
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 240

Conread position: 1-850
Cow position: chr6:12663629-12662766 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 658
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr6:13308699-13307842 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr6:14928145-14929003 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 653
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr6:15138480-15137617 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-850
Cow position: chr6:16592654-16593504 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 160

Conread position: 1-850
Cow position: chr6:17049057-17049933 (view UCSC Genome Browser custom track)
Alignm length: 882
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position: chr6:17121074-17121945 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 1-850
Cow position: chr6:20450654-20451514 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 190

Conread position: 1-850
Cow position: chr6:22738011-22737150 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 44

Conread position: 1-850
Cow position: chr6:24241977-24242842 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-850
Cow position: chr6:25375405-25374552 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 658
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 54

Conread position: 1-850
Cow position: chr6:26325513-26324644 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 658
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr6:28103178-28102316 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 633
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 68

Conread position: 1-850
Cow position: chr6:28160104-28160965 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 650
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 120

Conread position: 1-850
Cow position: chr6:33465648-33466513 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 161

Conread position: 1-850
Cow position: chr6:35874026-35873180 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 241

Conread position: 1-850
Cow position: chr6:36530970-36531831 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 658
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 160

Conread position: 1-850
Cow position: chr6:37387266-37388122 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 241

Conread position: 1-850
Cow position: chr6:39331844-39330977 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 242

Conread position: 1-850
Cow position: chr6:39912011-39912878 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr6:39999770-39998904 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 666
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 151

Conread position: 1-850
Cow position: chr6:40277745-40278607 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 641
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position: chr6:41231175-41232038 (view UCSC Genome Browser custom track)
Alignm length: 872
Alignm identity: 649
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 41

Conread position: 1-850
Cow position: chr6:42266422-42267273 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 649
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 241

Conread position: 1-850
Cow position: chr6:43087906-43087059 (view UCSC Genome Browser custom track)
Alignm length: 874
Alignm identity: 643
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr6:43186790-43187669 (view UCSC Genome Browser custom track)
Alignm length: 888
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 244

Conread position: 1-850
Cow position: chr6:44018142-44017272 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 220

Conread position: 1-850
Cow position: chr6:45936983-45937835 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 239

Conread position: 1-850
Cow position: chr6:51149628-51150498 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr6:51717232-51718112 (view UCSC Genome Browser custom track)
Alignm length: 887
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 253

Conread position: 1-850
Cow position: chr6:51732768-51733637 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 233

Conread position: 1-850
Cow position: chr6:55238381-55239246 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr6:55539583-55538715 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 675
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 138

Conread position: 1-850
Cow position: chr6:56452409-56451550 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 656
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 238

Conread position: 1-850
Cow position: chr6:59595935-59596810 (view UCSC Genome Browser custom track)
Alignm length: 903
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 254

Conread position: 1-850
Cow position: chr6:60378849-60379719 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 672
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position: chr6:62664461-62665331 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 671
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 243

Conread position: 1-850
Cow position: chr6:64719007-64719871 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 238

Conread position: 1-850
Cow position: chr6:65819896-65819026 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 172

Conread position: 2-437
Cow position: chr6:44096519-44096953 (view UCSC Genome Browser custom track)
Alignm length: 449
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 235

Conread position: 2-447
Cow position: chr6:3685640-3686087 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 239

Conread position: 2-509
Cow position: chr6:58952434-58951924 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 138

Conread position: 2-821
Cow position: chr6:16704045-16703237 (view UCSC Genome Browser custom track)
Alignm length: 845
Alignm identity: 615
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 234

Conread position: 2-850
Cow position: chr6:44147261-44146395 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 149

Conread position: 2-850
Cow position: chr6:60875985-60876851 (view UCSC Genome Browser custom track)
Alignm length: 876
Alignm identity: 669
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 238

Conread position: 3-508
Cow position: chr6:12646925-12647427 (view UCSC Genome Browser custom track)
Alignm length: 517
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 168

Conread position: 5-253
Cow position: chr6:50112778-50113018 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 176, 87

Conread position: 5-258
Cow position: chr6:64425185-64425444 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 26, 121

Conread position: 5-271
Cow position: chr6:3485708-3485437 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 232

Conread position: 5-328
Cow position: chr6:18986706-18987036 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 244
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 88, 135

Conread position: 5-404
Cow position: chr6:14264526-14264930 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 165

Conread position: 5-428
Cow position: chr6:14065138-14065562 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 209

Conread position: 5-547
Cow position: chr6:48882-48334 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 425
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 140

Conread position: 5-603
Cow position: chr6:2543408-2544028 (view UCSC Genome Browser custom track)
Alignm length: 633
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 167

Conread position: 5-666
Cow position: chr6:25358191-25357503 (view UCSC Genome Browser custom track)
Alignm length: 693
Alignm identity: 514
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 83

Conread position: 5-693
Cow position: chr6:65867477-65868175 (view UCSC Genome Browser custom track)
Alignm length: 707
Alignm identity: 491
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 250

Conread position: 5-840
Cow position: chr6:25791006-25790171 (view UCSC Genome Browser custom track)
Alignm length: 860
Alignm identity: 641
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 156

Conread position: 5-848
Cow position: chr6:10235896-10236738 (view UCSC Genome Browser custom track)
Alignm length: 862
Alignm identity: 615
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 45

Conread position: 5-848
Cow position: chr6:10651095-10650252 (view UCSC Genome Browser custom track)
Alignm length: 869
Alignm identity: 616
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 83

Conread position: 5-850
Cow position: chr6:27475104-27475972 (view UCSC Genome Browser custom track)
Alignm length: 882
Alignm identity: 652
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 76

Conread position: 5-850
Cow position: chr6:43798221-43797342 (view UCSC Genome Browser custom track)
Alignm length: 885
Alignm identity: 667
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 27

Conread position: 5-850
Cow position: chr6:47040508-47039655 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 651
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 37

Conread position: 6-442
Cow position: chr6:39359502-39359067 (view UCSC Genome Browser custom track)
Alignm length: 454
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 167

Conread position: 6-473
Cow position: chr6:52696329-52696795 (view UCSC Genome Browser custom track)
Alignm length: 479
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 140

Conread position: 6-473
Cow position: chr6:53462461-53461990 (view UCSC Genome Browser custom track)
Alignm length: 477
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 225

Conread position: 6-849
Cow position: chr6:34074552-34075424 (view UCSC Genome Browser custom track)
Alignm length: 882
Alignm identity: 649
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 31

Conread position: 6-850
Cow position: chr6:9738567-9737708 (view UCSC Genome Browser custom track)
Alignm length: 871
Alignm identity: 665
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 243

Conread position: 6-850
Cow position: chr6:40974877-40975721 (view UCSC Genome Browser custom track)
Alignm length: 861
Alignm identity: 648
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 236

Conread position: 7-215
Cow position: chr6:705561-705775 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 167
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 94, 155

Conread position: 7-304
Cow position: chr6:34018105-34018406 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 234

Conread position: 7-414
Cow position: chr6:41389760-41389352 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 238

Conread position: 7-848
Cow position: chr6:6720674-6721525 (view UCSC Genome Browser custom track)
Alignm length: 878
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 237

Conread position: 7-850
Cow position: chr6:16050598-16049739 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 659
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 228

Conread position: 7-850
Cow position: chr6:19104217-19103352 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 662
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 238

Conread position: 7-850
Cow position: chr6:19713539-19712689 (view UCSC Genome Browser custom track)
Alignm length: 863
Alignm identity: 665
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 25

Conread position: 7-850
Cow position: chr6:26668332-26667469 (view UCSC Genome Browser custom track)
Alignm length: 870
Alignm identity: 660
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 233

Conread position: 7-850
Cow position: chr6:26772429-26771566 (view UCSC Genome Browser custom track)
Alignm length: 868
Alignm identity: 664
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 232

Conread position: 7-850
Cow position: chr6:28185638-28184765 (view UCSC Genome Browser custom track)
Alignm length: 879
Alignm identity: 668
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 232

Conread position: 7-850
Cow position: chr6:45975201-45976055 (view UCSC Genome Browser custom track)
Alignm length: 867
Alignm identity: 541
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 232

Conread position: 10-426
Cow position: chr6:237172-236759 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 105

Conread position: 10-520
Cow position: chr6:1888740-1888237 (view UCSC Genome Browser custom track)
Alignm length: 519
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 227

Conread position: 10-850
Cow position: chr6:9840436-9839573 (view UCSC Genome Browser custom track)
Alignm length: 877
Alignm identity: 610
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 147

Conread position: 14-704
Cow position: chr6:53935938-53935236 (view UCSC Genome Browser custom track)
Alignm length: 712
Alignm identity: 521
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 235

Conread position: 19-850
Cow position: chr6:47573486-47574344 (view UCSC Genome Browser custom track)
Alignm length: 875
Alignm identity: 626
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 275

Conread position: 23-686
Cow position: chr6:50486066-50485400 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 519
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 217

Conread position: 23-850
Cow position: chr6:16418972-16418135 (view UCSC Genome Browser custom track)
Alignm length: 856
Alignm identity: 643
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 38

Conread position: 24-309
Cow position: chr6:225204-224915 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 31

Conread position: 24-850
Cow position: chr6:27172540-27173397 (view UCSC Genome Browser custom track)
Alignm length: 865
Alignm identity: 645
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 11

Conread position: 26-848
Cow position: chr6:15784261-15783435 (view UCSC Genome Browser custom track)
Alignm length: 851
Alignm identity: 600
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 29

Conread position: 26-850
Cow position: chr6:21832945-21832106 (view UCSC Genome Browser custom track)
Alignm length: 848
Alignm identity: 611
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 55

Conread position: 27-482
Cow position: chr6:11829914-11829459 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 155, 74

Conread position: 28-584
Cow position: chr6:365604-366165 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 214

Conread position: 40-850
Cow position: chr6:20553516-20552688 (view UCSC Genome Browser custom track)
Alignm length: 835
Alignm identity: 624
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 201

Conread position: 52-850
Cow position: chr6:11289718-11288909 (view UCSC Genome Browser custom track)
Alignm length: 826
Alignm identity: 614
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 30

Conread position: 55-848
Cow position: chr6:33950409-33949610 (view UCSC Genome Browser custom track)
Alignm length: 816
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 106

Conread position: 56-584
Cow position: chr6:47380419-47380942 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 186

Conread position: 56-660
Cow position: chr6:11168247-11168864 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 106

Conread position: 64-385
Cow position: chr6:10680628-10680952 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 39, 17

Conread position: 74-442
Cow position: chr6:25217716-25218085 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 144

Conread position: 74-823
Cow position: chr6:55474065-55474842 (view UCSC Genome Browser custom track)
Alignm length: 783
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 176

Conread position: 76-386
Cow position: chr6:66548239-66548545 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 210
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 23, 73

Conread position: 77-672
Cow position: chr6:45724383-45723779 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 98

Conread position: 77-673
Cow position: chr6:52899716-52900317 (view UCSC Genome Browser custom track)
Alignm length: 612
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 163

Conread position: 82-850
Cow position: chr6:15276473-15275684 (view UCSC Genome Browser custom track)
Alignm length: 795
Alignm identity: 597
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 154

Conread position: 84-850
Cow position: chr6:888326-889111 (view UCSC Genome Browser custom track)
Alignm length: 791
Alignm identity: 601
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 160

Conread position: 96-850
Cow position: chr6:67553022-67553788 (view UCSC Genome Browser custom track)
Alignm length: 773
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 140

Conread position: 101-847
Cow position: chr6:1096944-1096182 (view UCSC Genome Browser custom track)
Alignm length: 777
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 41

Conread position: 102-356
Cow position: chr6:38672026-38672274 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 184
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 28

Conread position: 103-291
Cow position: chr6:68871131-68871320 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 78, 132

Conread position: 103-310
Cow position: chr6:23880560-23880355 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 81, 128

Conread position: 103-538
Cow position: chr6:38932462-38932025 (view UCSC Genome Browser custom track)
Alignm length: 442
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 132

Conread position: 103-547
Cow position: chr6:49826460-49826014 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 342
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 137

Conread position: 103-841
Cow position: chr6:14851954-14851207 (view UCSC Genome Browser custom track)
Alignm length: 759
Alignm identity: 553
Alignm E-value: 0
Alignm gaps (pig, cow): 59, 132

Conread position: 103-850
Cow position: chr6:46947612-46948371 (view UCSC Genome Browser custom track)
Alignm length: 767
Alignm identity: 582
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 22

Conread position: 107-419
Cow position: chr6:9586861-9587166 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 123

Conread position: 108-509
Cow position: chr6:18520286-18519882 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 128

Conread position: 108-833
Cow position: chr6:55592854-55593609 (view UCSC Genome Browser custom track)
Alignm length: 762
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 9

Conread position: 108-850
Cow position: chr6:53543681-53542927 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 584
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 105

Conread position: 109-404
Cow position: chr6:1402730-1402435 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 130

Conread position: 109-404
Cow position: chr6:1407318-1407023 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 130

Conread position: 109-434
Cow position: chr6:55902020-55902347 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 131

Conread position: 109-503
Cow position: chr6:35883370-35883766 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 114

Conread position: 109-519
Cow position: chr6:49165801-49165392 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 48

Conread position: 109-849
Cow position: chr6:40550900-40550151 (view UCSC Genome Browser custom track)
Alignm length: 756
Alignm identity: 570
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 126

Conread position: 110-829
Cow position: chr6:65875482-65874753 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 124

Conread position: 112-735
Cow position: chr6:61829030-61829663 (view UCSC Genome Browser custom track)
Alignm length: 638
Alignm identity: 474
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 128

Conread position: 113-530
Cow position: chr6:41414540-41414124 (view UCSC Genome Browser custom track)
Alignm length: 427
Alignm identity: 274
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 68, 118

Conread position: 114-850
Cow position: chr6:14950863-14950104 (view UCSC Genome Browser custom track)
Alignm length: 765
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 197

Conread position: 114-850
Cow position: chr6:45480273-45479532 (view UCSC Genome Browser custom track)
Alignm length: 758
Alignm identity: 571
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 126

Conread position: 116-584
Cow position: chr6:57181626-57182089 (view UCSC Genome Browser custom track)
Alignm length: 475
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 15

Conread position: 121-310
Cow position: chr6:28701884-28701703 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 141
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 121-850
Cow position: chr6:50121117-50120377 (view UCSC Genome Browser custom track)
Alignm length: 750
Alignm identity: 564
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 113

Conread position: 131-735
Cow position: chr6:530060-529459 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 443
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 66

Conread position: 131-751
Cow position: chr6:3573617-3574236 (view UCSC Genome Browser custom track)
Alignm length: 631
Alignm identity: 476
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 68

Conread position: 131-850
Cow position: chr6:60332163-60332901 (view UCSC Genome Browser custom track)
Alignm length: 743
Alignm identity: 567
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 109

Conread position: 133-473
Cow position: chr6:1380632-1380295 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 229
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 50, 24

Conread position: 136-760
Cow position: chr6:6556786-6557424 (view UCSC Genome Browser custom track)
Alignm length: 643
Alignm identity: 480
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 104

Conread position: 137-732
Cow position: chr6:58605356-58605961 (view UCSC Genome Browser custom track)
Alignm length: 618
Alignm identity: 450
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 99

Conread position: 137-848
Cow position: chr6:24632418-24631701 (view UCSC Genome Browser custom track)
Alignm length: 738
Alignm identity: 515
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 20

Conread position: 138-847
Cow position: chr6:30317114-30316377 (view UCSC Genome Browser custom track)
Alignm length: 746
Alignm identity: 503
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 95

Conread position: 138-848
Cow position: chr6:9234339-9235066 (view UCSC Genome Browser custom track)
Alignm length: 733
Alignm identity: 552
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 102

Conread position: 143-849
Cow position: chr6:6182871-6182172 (view UCSC Genome Browser custom track)
Alignm length: 719
Alignm identity: 542
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 14

Conread position: 148-391
Cow position: chr6:13315476-13315232 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 33, 89

Conread position: 148-850
Cow position: chr6:22044171-22043454 (view UCSC Genome Browser custom track)
Alignm length: 724
Alignm identity: 557
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 87

Conread position: 151-711
Cow position: chr6:2641387-2641948 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 177
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 30, 89

Conread position: 154-431
Cow position: chr6:1262725-1263003 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 81

Conread position: 181-493
Cow position: chr6:17927298-17927607 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 7

Conread position: 181-539
Cow position: chr6:39897824-39898180 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 55

Conread position: 181-765
Cow position: chr6:15153985-15154572 (view UCSC Genome Browser custom track)
Alignm length: 600
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 15

Conread position: 181-842
Cow position: chr6:58030654-58031318 (view UCSC Genome Browser custom track)
Alignm length: 677
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 50

Conread position: 181-850
Cow position: chr6:32419827-32420496 (view UCSC Genome Browser custom track)
Alignm length: 682
Alignm identity: 507
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 44

Conread position: 181-850
Cow position: chr6:57521048-57521731 (view UCSC Genome Browser custom track)
Alignm length: 688
Alignm identity: 525
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 55

Conread position: 182-819
Cow position: chr6:1498076-1498726 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 460
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 54

Conread position: 183-850
Cow position: chr6:55945550-55944886 (view UCSC Genome Browser custom track)
Alignm length: 680
Alignm identity: 442
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 43

Conread position: 185-848
Cow position: chr6:30077404-30076717 (view UCSC Genome Browser custom track)
Alignm length: 697
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 49

Conread position: 186-729
Cow position: chr6:33508144-33508674 (view UCSC Genome Browser custom track)
Alignm length: 555
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 47

Conread position: 196-621
Cow position: chr6:2452737-2453164 (view UCSC Genome Browser custom track)
Alignm length: 434
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 40

Conread position: 196-841
Cow position: chr6:58880104-58880741 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 137, 27

Conread position: 198-489
Cow position: chr6:16699097-16699386 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 27

Conread position: 206-849
Cow position: chr6:31940766-31941422 (view UCSC Genome Browser custom track)
Alignm length: 661
Alignm identity: 510
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 30

Conread position: 206-850
Cow position: chr6:705905-706554 (view UCSC Genome Browser custom track)
Alignm length: 662
Alignm identity: 494
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 30

Conread position: 228-588
Cow position: chr6:67211673-67211315 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 57

Conread position: 230-526
Cow position: chr6:49625753-49626047 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 206
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 106, 53

Conread position: 236-380
Cow position: chr6:46372897-46372755 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 97, 46

Conread position: 236-749
Cow position: chr6:67173481-67174003 (view UCSC Genome Browser custom track)
Alignm length: 525
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 46

Conread position: 236-848
Cow position: chr6:32427085-32427677 (view UCSC Genome Browser custom track)
Alignm length: 626
Alignm identity: 381
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 40, 48

Conread position: 236-850
Cow position: chr6:1105223-1104605 (view UCSC Genome Browser custom track)
Alignm length: 637
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 46

Conread position: 236-850
Cow position: chr6:4388666-4389268 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 469
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 47

Conread position: 236-850
Cow position: chr6:33983749-33984352 (view UCSC Genome Browser custom track)
Alignm length: 624
Alignm identity: 445
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 87

Conread position: 240-769
Cow position: chr6:47171012-47171534 (view UCSC Genome Browser custom track)
Alignm length: 539
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 53

Conread position: 241-569
Cow position: chr6:40759961-40760281 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 51

Conread position: 241-584
Cow position: chr6:55042190-55041854 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 7

Conread position: 242-647
Cow position: chr6:58016291-58016694 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 15

Conread position: 243-419
Cow position: chr6:40730130-40730305 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 90, 39

Conread position: 243-850
Cow position: chr6:2089216-2089825 (view UCSC Genome Browser custom track)
Alignm length: 622
Alignm identity: 473
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 49

Conread position: 243-850
Cow position: chr6:12997355-12997972 (view UCSC Genome Browser custom track)
Alignm length: 621
Alignm identity: 478
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 26

Conread position: 243-850
Cow position: chr6:33809501-33808878 (view UCSC Genome Browser custom track)
Alignm length: 625
Alignm identity: 481
Alignm E-value: 0
Alignm gaps (pig, cow): 90, 39

Conread position: 244-764
Cow position: chr6:47150035-47149504 (view UCSC Genome Browser custom track)
Alignm length: 536
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 38

Conread position: 245-415
Cow position: chr6:10680628-10680459 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 138
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 88, 38

Conread position: 249-609
Cow position: chr6:18970492-18970136 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 33

Conread position: 251-849
Cow position: chr6:35600620-35601232 (view UCSC Genome Browser custom track)
Alignm length: 615
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 82, 32

Conread position: 254-800
Cow position: chr6:38438550-38439113 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 38

Conread position: 258-609
Cow position: chr6:65892920-65892567 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 12

Conread position: 266-800
Cow position: chr6:7105573-7105027 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 17

Conread position: 282-850
Cow position: chr6:14897155-14897738 (view UCSC Genome Browser custom track)
Alignm length: 587
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 46

Conread position: 302-850
Cow position: chr6:21711695-21712262 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 449
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 0

Conread position: 306-800
Cow position: chr6:28481332-28481836 (view UCSC Genome Browser custom track)
Alignm length: 516
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 46

Show alignments to all cow chromosomes.