Cow genome map
| Conread name: | Utr1-UTR010044B01 | 
| Conread position: | 1-225 | 
| Cow position: | chr6:33810477-33810709 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 6.00036e-42 | 
| Alignm gaps (pig, cow): | 98, 0 | 
| Conread position: | 1-225 | 
| Cow position: | chr6:52194283-52194051 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 99, 150 | 
| Conread position: | 1-225 | 
| Cow position: | chr6:65905608-65905379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 9e-36 | 
| Alignm gaps (pig, cow): | 100, 0 | 
| Conread position: | 1-237 | 
| Cow position: | chr6:27527300-27527058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 80 | 
| Conread position: | 1-257 | 
| Cow position: | chr6:28400565-28400304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 7.00649e-44 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-275 | 
| Cow position: | chr6:13849759-13850037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 98, 139 | 
| Conread position: | 1-275 | 
| Cow position: | chr6:39435235-39434953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 70, 243 | 
| Conread position: | 1-293 | 
| Cow position: | chr6:24624710-24624411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 261 | 
| Conread position: | 1-310 | 
| Cow position: | chr6:21711247-21711560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-319 | 
| Cow position: | chr6:2377390-2377712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 243 | 
| Conread position: | 1-328 | 
| Cow position: | chr6:14133057-14132726 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 240 | 
| Conread position: | 1-328 | 
| Cow position: | chr6:35824534-35824863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 90 | 
| Conread position: | 1-344 | 
| Cow position: | chr6:35967780-35967432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 243 | 
| Conread position: | 1-361 | 
| Cow position: | chr6:12971231-12970871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 147 | 
| Conread position: | 1-401 | 
| Cow position: | chr6:66277119-66277532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 163 | 
| Conread position: | 1-410 | 
| Cow position: | chr6:51876517-51876924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 20 | 
| Conread position: | 1-412 | 
| Cow position: | chr6:8756131-8755715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 238 | 
| Conread position: | 1-423 | 
| Cow position: | chr6:1275302-1274877 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 162 | 
| Conread position: | 1-431 | 
| Cow position: | chr6:43778205-43778639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 234 | 
| Conread position: | 1-442 | 
| Cow position: | chr6:22679541-22679987 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 243 | 
| Conread position: | 1-449 | 
| Cow position: | chr6:6474751-6474308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 227 | 
| Conread position: | 1-449 | 
| Cow position: | chr6:45591234-45591687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 243 | 
| Conread position: | 1-461 | 
| Cow position: | chr6:27761391-27761854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 49 | 
| Conread position: | 1-473 | 
| Cow position: | chr6:62577496-62577018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-481 | 
| Cow position: | chr6:1819111-1818628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 375 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 60 | 
| Conread position: | 1-502 | 
| Cow position: | chr6:50720784-50721289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 512 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 238 | 
| Conread position: | 1-504 | 
| Cow position: | chr6:7191861-7191379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 513 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 155 | 
| Conread position: | 1-508 | 
| Cow position: | chr6:25409290-25408765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 530 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 126 | 
| Conread position: | 1-509 | 
| Cow position: | chr6:34129143-34129657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 520 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 239 | 
| Conread position: | 1-511 | 
| Cow position: | chr6:10267406-10266889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 522 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 232 | 
| Conread position: | 1-514 | 
| Cow position: | chr6:21975639-21976156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 216 | 
| Conread position: | 1-535 | 
| Cow position: | chr6:17595599-17595059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 545 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-547 | 
| Cow position: | chr6:43790892-43790338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 238 | 
| Conread position: | 1-561 | 
| Cow position: | chr6:8536607-8536043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 572 | 
| Alignm identity: | 430 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 70 | 
| Conread position: | 1-561 | 
| Cow position: | chr6:48875645-48875088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 571 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 240 | 
| Conread position: | 1-562 | 
| Cow position: | chr6:2581104-2581654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 574 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 158 | 
| Conread position: | 1-584 | 
| Cow position: | chr6:28488879-28488303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 591 | 
| Alignm identity: | 437 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 235 | 
| Conread position: | 1-584 | 
| Cow position: | chr6:38873973-38873386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 595 | 
| Alignm identity: | 455 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 222 | 
| Conread position: | 1-584 | 
| Cow position: | chr6:65929932-65930533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 607 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 245 | 
| Conread position: | 1-607 | 
| Cow position: | chr6:20351403-20350785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 623 | 
| Alignm identity: | 463 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-609 | 
| Cow position: | chr6:41408092-41408710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 625 | 
| Alignm identity: | 470 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 160 | 
| Conread position: | 1-618 | 
| Cow position: | chr6:12628587-12629202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 636 | 
| Alignm identity: | 474 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 150 | 
| Conread position: | 1-622 | 
| Cow position: | chr6:18497005-18497642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 223 | 
| Conread position: | 1-636 | 
| Cow position: | chr6:33490368-33489721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 652 | 
| Alignm identity: | 488 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-655 | 
| Cow position: | chr6:1507824-1507157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 672 | 
| Alignm identity: | 501 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-655 | 
| Cow position: | chr6:66189114-66188447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 672 | 
| Alignm identity: | 507 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-668 | 
| Cow position: | chr6:27151754-27151075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 685 | 
| Alignm identity: | 516 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 209 | 
| Conread position: | 1-675 | 
| Cow position: | chr6:11354477-11353800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 696 | 
| Alignm identity: | 502 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 238 | 
| Conread position: | 1-680 | 
| Cow position: | chr6:68029863-68030557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 699 | 
| Alignm identity: | 524 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 245 | 
| Conread position: | 1-692 | 
| Cow position: | chr6:51867681-51868377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 708 | 
| Alignm identity: | 530 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-693 | 
| Cow position: | chr6:30270217-30269511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 711 | 
| Alignm identity: | 558 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 243 | 
| Conread position: | 1-719 | 
| Cow position: | chr6:59618752-59619495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 745 | 
| Alignm identity: | 557 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 294 | 
| Conread position: | 1-727 | 
| Cow position: | chr6:36230840-36230100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 745 | 
| Alignm identity: | 561 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 243 | 
| Conread position: | 1-729 | 
| Cow position: | chr6:41192007-41192751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 748 | 
| Alignm identity: | 515 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 291 | 
| Conread position: | 1-732 | 
| Cow position: | chr6:15924903-15924164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 749 | 
| Alignm identity: | 508 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 244 | 
| Conread position: | 1-735 | 
| Cow position: | chr6:43620417-43621165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 753 | 
| Alignm identity: | 576 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-749 | 
| Cow position: | chr6:16595689-16596411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 762 | 
| Alignm identity: | 485 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 156 | 
| Conread position: | 1-751 | 
| Cow position: | chr6:37385839-37386595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 768 | 
| Alignm identity: | 501 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 235 | 
| Conread position: | 1-753 | 
| Cow position: | chr6:34844026-34843263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 771 | 
| Alignm identity: | 598 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 124 | 
| Conread position: | 1-786 | 
| Cow position: | chr6:4904288-4903512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 797 | 
| Alignm identity: | 608 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 88 | 
| Conread position: | 1-794 | 
| Cow position: | chr6:10611511-10612322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 820 | 
| Alignm identity: | 586 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 13 | 
| Conread position: | 1-836 | 
| Cow position: | chr6:4467292-4468163 (view UCSC Genome Browser custom track) | 
| Alignm length: | 880 | 
| Alignm identity: | 626 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 125 | 
| Conread position: | 1-837 | 
| Cow position: | chr6:916729-917597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 873 | 
| Alignm identity: | 655 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 243 | 
| Conread position: | 1-838 | 
| Cow position: | chr6:9734276-9733434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 869 | 
| Alignm identity: | 625 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 31 | 
| Conread position: | 1-838 | 
| Cow position: | chr6:31913489-31912631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 863 | 
| Alignm identity: | 661 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 243 | 
| Conread position: | 1-840 | 
| Cow position: | chr6:16767150-16766296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 864 | 
| Alignm identity: | 648 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 219 | 
| Conread position: | 1-841 | 
| Cow position: | chr6:3272794-3271936 (view UCSC Genome Browser custom track) | 
| Alignm length: | 866 | 
| Alignm identity: | 660 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 243 | 
| Conread position: | 1-841 | 
| Cow position: | chr6:34504836-34503977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 864 | 
| Alignm identity: | 668 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 239 | 
| Conread position: | 1-842 | 
| Cow position: | chr6:41676624-41677475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 867 | 
| Alignm identity: | 609 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 224 | 
| Conread position: | 1-843 | 
| Cow position: | chr6:2876345-2875485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 868 | 
| Alignm identity: | 669 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 234 | 
| Conread position: | 1-843 | 
| Cow position: | chr6:28171589-28172462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 883 | 
| Alignm identity: | 644 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 235 | 
| Conread position: | 1-848 | 
| Cow position: | chr6:24584679-24583850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 862 | 
| Alignm identity: | 601 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 160 | 
| Conread position: | 1-848 | 
| Cow position: | chr6:28108602-28107775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 868 | 
| Alignm identity: | 544 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 34 | 
| Conread position: | 1-848 | 
| Cow position: | chr6:34493363-34494226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 870 | 
| Alignm identity: | 665 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 146 | 
| Conread position: | 1-848 | 
| Cow position: | chr6:40158819-40157982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 874 | 
| Alignm identity: | 586 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 58 | 
| Conread position: | 1-849 | 
| Cow position: | chr6:28001694-28000841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 877 | 
| Alignm identity: | 655 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 242 | 
| Conread position: | 1-849 | 
| Cow position: | chr6:28064677-28065545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 873 | 
| Alignm identity: | 657 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-849 | 
| Cow position: | chr6:50570888-50571746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 872 | 
| Alignm identity: | 654 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 172 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:127446-126579 (view UCSC Genome Browser custom track) | 
| Alignm length: | 872 | 
| Alignm identity: | 657 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 243 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:182857-181995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 879 | 
| Alignm identity: | 652 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 106, 237 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:328673-327807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 874 | 
| Alignm identity: | 658 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 240 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:478237-479102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 870 | 
| Alignm identity: | 666 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 240 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:1536396-1537250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 869 | 
| Alignm identity: | 644 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 171 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:3151905-3152768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 870 | 
| Alignm identity: | 654 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 80 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:3886820-3885949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 878 | 
| Alignm identity: | 659 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 124 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:3927832-3928690 (view UCSC Genome Browser custom track) | 
| Alignm length: | 874 | 
| Alignm identity: | 599 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 245 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:5947089-5946219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 876 | 
| Alignm identity: | 669 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 23 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:6120293-6119449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 869 | 
| Alignm identity: | 672 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 238 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:7138654-7137786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 875 | 
| Alignm identity: | 675 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:7467965-7467095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 876 | 
| Alignm identity: | 671 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 235 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:8204866-8205743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 887 | 
| Alignm identity: | 667 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 246 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:10043901-10044762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 874 | 
| Alignm identity: | 667 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 243 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:11019343-11020214 (view UCSC Genome Browser custom track) | 
| Alignm length: | 876 | 
| Alignm identity: | 675 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 241 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:11722509-11721660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 871 | 
| Alignm identity: | 653 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 241 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:11870245-11869379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 872 | 
| Alignm identity: | 654 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 240 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:12663629-12662766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 874 | 
| Alignm identity: | 658 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:13308699-13307842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 875 | 
| Alignm identity: | 662 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:14928145-14929003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 868 | 
| Alignm identity: | 653 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:15138480-15137617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 874 | 
| Alignm identity: | 662 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 238 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:16592654-16593504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 874 | 
| Alignm identity: | 659 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 160 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:17049057-17049933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 882 | 
| Alignm identity: | 668 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 243 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:17121074-17121945 (view UCSC Genome Browser custom track) | 
| Alignm length: | 879 | 
| Alignm identity: | 652 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 243 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:20450654-20451514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 871 | 
| Alignm identity: | 671 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 190 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:22738011-22737150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 876 | 
| Alignm identity: | 668 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 44 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:24241977-24242842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 874 | 
| Alignm identity: | 666 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 238 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:25375405-25374552 (view UCSC Genome Browser custom track) | 
| Alignm length: | 878 | 
| Alignm identity: | 658 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 54 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:26325513-26324644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 875 | 
| Alignm identity: | 658 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:28103178-28102316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 875 | 
| Alignm identity: | 633 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 68 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:28160104-28160965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 872 | 
| Alignm identity: | 650 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 120 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:33465648-33466513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 877 | 
| Alignm identity: | 652 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 161 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:35874026-35873180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 869 | 
| Alignm identity: | 656 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 241 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:36530970-36531831 (view UCSC Genome Browser custom track) | 
| Alignm length: | 877 | 
| Alignm identity: | 658 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 160 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:37387266-37388122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 869 | 
| Alignm identity: | 652 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 241 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:39331844-39330977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 874 | 
| Alignm identity: | 660 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 242 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:39912011-39912878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 875 | 
| Alignm identity: | 668 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:39999770-39998904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 875 | 
| Alignm identity: | 666 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 151 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:40277745-40278607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 868 | 
| Alignm identity: | 641 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 243 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:41231175-41232038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 872 | 
| Alignm identity: | 649 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 41 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:42266422-42267273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 871 | 
| Alignm identity: | 649 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 241 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:43087906-43087059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 874 | 
| Alignm identity: | 643 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:43186790-43187669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 888 | 
| Alignm identity: | 652 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 244 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:44018142-44017272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 877 | 
| Alignm identity: | 660 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 220 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:45936983-45937835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 870 | 
| Alignm identity: | 656 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 239 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:51149628-51150498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 875 | 
| Alignm identity: | 667 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:51717232-51718112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 887 | 
| Alignm identity: | 668 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 253 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:51732768-51733637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 875 | 
| Alignm identity: | 671 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 233 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:55238381-55239246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 875 | 
| Alignm identity: | 667 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:55539583-55538715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 875 | 
| Alignm identity: | 675 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 138 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:56452409-56451550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 871 | 
| Alignm identity: | 656 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 238 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:59595935-59596810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 903 | 
| Alignm identity: | 667 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 254 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:60378849-60379719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 875 | 
| Alignm identity: | 672 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 243 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:62664461-62665331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 875 | 
| Alignm identity: | 671 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 243 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:64719007-64719871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 870 | 
| Alignm identity: | 659 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 238 | 
| Conread position: | 1-850 | 
| Cow position: | chr6:65819896-65819026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 878 | 
| Alignm identity: | 659 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 172 | 
| Conread position: | 2-437 | 
| Cow position: | chr6:44096519-44096953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 235 | 
| Conread position: | 2-447 | 
| Cow position: | chr6:3685640-3686087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 239 | 
| Conread position: | 2-509 | 
| Cow position: | chr6:58952434-58951924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 519 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 138 | 
| Conread position: | 2-821 | 
| Cow position: | chr6:16704045-16703237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 845 | 
| Alignm identity: | 615 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 234 | 
| Conread position: | 2-850 | 
| Cow position: | chr6:44147261-44146395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 875 | 
| Alignm identity: | 662 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 149 | 
| Conread position: | 2-850 | 
| Cow position: | chr6:60875985-60876851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 876 | 
| Alignm identity: | 669 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 238 | 
| Conread position: | 3-508 | 
| Cow position: | chr6:12646925-12647427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 517 | 
| Alignm identity: | 372 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 168 | 
| Conread position: | 5-253 | 
| Cow position: | chr6:50112778-50113018 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 176, 87 | 
| Conread position: | 5-258 | 
| Cow position: | chr6:64425185-64425444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 6.00036e-42 | 
| Alignm gaps (pig, cow): | 26, 121 | 
| Conread position: | 5-271 | 
| Cow position: | chr6:3485708-3485437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 232 | 
| Conread position: | 5-328 | 
| Cow position: | chr6:18986706-18987036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 8.40779e-45 | 
| Alignm gaps (pig, cow): | 88, 135 | 
| Conread position: | 5-404 | 
| Cow position: | chr6:14264526-14264930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 165 | 
| Conread position: | 5-428 | 
| Cow position: | chr6:14065138-14065562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 209 | 
| Conread position: | 5-547 | 
| Cow position: | chr6:48882-48334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 554 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 99, 140 | 
| Conread position: | 5-603 | 
| Cow position: | chr6:2543408-2544028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 633 | 
| Alignm identity: | 428 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 167 | 
| Conread position: | 5-666 | 
| Cow position: | chr6:25358191-25357503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 693 | 
| Alignm identity: | 514 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 83 | 
| Conread position: | 5-693 | 
| Cow position: | chr6:65867477-65868175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 707 | 
| Alignm identity: | 491 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 250 | 
| Conread position: | 5-840 | 
| Cow position: | chr6:25791006-25790171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 860 | 
| Alignm identity: | 641 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 156 | 
| Conread position: | 5-848 | 
| Cow position: | chr6:10235896-10236738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 862 | 
| Alignm identity: | 615 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 45 | 
| Conread position: | 5-848 | 
| Cow position: | chr6:10651095-10650252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 869 | 
| Alignm identity: | 616 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 83 | 
| Conread position: | 5-850 | 
| Cow position: | chr6:27475104-27475972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 882 | 
| Alignm identity: | 652 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 76 | 
| Conread position: | 5-850 | 
| Cow position: | chr6:43798221-43797342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 885 | 
| Alignm identity: | 667 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 27 | 
| Conread position: | 5-850 | 
| Cow position: | chr6:47040508-47039655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 870 | 
| Alignm identity: | 651 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 37 | 
| Conread position: | 6-442 | 
| Cow position: | chr6:39359502-39359067 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 167 | 
| Conread position: | 6-473 | 
| Cow position: | chr6:52696329-52696795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 140 | 
| Conread position: | 6-473 | 
| Cow position: | chr6:53462461-53461990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 225 | 
| Conread position: | 6-849 | 
| Cow position: | chr6:34074552-34075424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 882 | 
| Alignm identity: | 649 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 31 | 
| Conread position: | 6-850 | 
| Cow position: | chr6:9738567-9737708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 871 | 
| Alignm identity: | 665 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 243 | 
| Conread position: | 6-850 | 
| Cow position: | chr6:40974877-40975721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 861 | 
| Alignm identity: | 648 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 236 | 
| Conread position: | 7-215 | 
| Cow position: | chr6:705561-705775 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 94, 155 | 
| Conread position: | 7-304 | 
| Cow position: | chr6:34018105-34018406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 234 | 
| Conread position: | 7-414 | 
| Cow position: | chr6:41389760-41389352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 238 | 
| Conread position: | 7-848 | 
| Cow position: | chr6:6720674-6721525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 878 | 
| Alignm identity: | 600 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 237 | 
| Conread position: | 7-850 | 
| Cow position: | chr6:16050598-16049739 (view UCSC Genome Browser custom track) | 
| Alignm length: | 868 | 
| Alignm identity: | 659 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 228 | 
| Conread position: | 7-850 | 
| Cow position: | chr6:19104217-19103352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 870 | 
| Alignm identity: | 662 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 238 | 
| Conread position: | 7-850 | 
| Cow position: | chr6:19713539-19712689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 863 | 
| Alignm identity: | 665 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 25 | 
| Conread position: | 7-850 | 
| Cow position: | chr6:26668332-26667469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 870 | 
| Alignm identity: | 660 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 233 | 
| Conread position: | 7-850 | 
| Cow position: | chr6:26772429-26771566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 868 | 
| Alignm identity: | 664 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 232 | 
| Conread position: | 7-850 | 
| Cow position: | chr6:28185638-28184765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 879 | 
| Alignm identity: | 668 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 232 | 
| Conread position: | 7-850 | 
| Cow position: | chr6:45975201-45976055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 867 | 
| Alignm identity: | 541 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 232 | 
| Conread position: | 10-426 | 
| Cow position: | chr6:237172-236759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 105 | 
| Conread position: | 10-520 | 
| Cow position: | chr6:1888740-1888237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 519 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 227 | 
| Conread position: | 10-850 | 
| Cow position: | chr6:9840436-9839573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 877 | 
| Alignm identity: | 610 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 147 | 
| Conread position: | 14-704 | 
| Cow position: | chr6:53935938-53935236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 712 | 
| Alignm identity: | 521 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 235 | 
| Conread position: | 19-850 | 
| Cow position: | chr6:47573486-47574344 (view UCSC Genome Browser custom track) | 
| Alignm length: | 875 | 
| Alignm identity: | 626 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 275 | 
| Conread position: | 23-686 | 
| Cow position: | chr6:50486066-50485400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 682 | 
| Alignm identity: | 519 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 217 | 
| Conread position: | 23-850 | 
| Cow position: | chr6:16418972-16418135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 856 | 
| Alignm identity: | 643 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 38 | 
| Conread position: | 24-309 | 
| Cow position: | chr6:225204-224915 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 31 | 
| Conread position: | 24-850 | 
| Cow position: | chr6:27172540-27173397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 865 | 
| Alignm identity: | 645 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 11 | 
| Conread position: | 26-848 | 
| Cow position: | chr6:15784261-15783435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 851 | 
| Alignm identity: | 600 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 29 | 
| Conread position: | 26-850 | 
| Cow position: | chr6:21832945-21832106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 848 | 
| Alignm identity: | 611 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 55 | 
| Conread position: | 27-482 | 
| Cow position: | chr6:11829914-11829459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 155, 74 | 
| Conread position: | 28-584 | 
| Cow position: | chr6:365604-366165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 571 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 214 | 
| Conread position: | 40-850 | 
| Cow position: | chr6:20553516-20552688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 835 | 
| Alignm identity: | 624 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 201 | 
| Conread position: | 52-850 | 
| Cow position: | chr6:11289718-11288909 (view UCSC Genome Browser custom track) | 
| Alignm length: | 826 | 
| Alignm identity: | 614 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 30 | 
| Conread position: | 55-848 | 
| Cow position: | chr6:33950409-33949610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 816 | 
| Alignm identity: | 567 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 106 | 
| Conread position: | 56-584 | 
| Cow position: | chr6:47380419-47380942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 539 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 186 | 
| Conread position: | 56-660 | 
| Cow position: | chr6:11168247-11168864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 625 | 
| Alignm identity: | 450 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 106 | 
| Conread position: | 64-385 | 
| Cow position: | chr6:10680628-10680952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 4.99997e-41 | 
| Alignm gaps (pig, cow): | 39, 17 | 
| Conread position: | 74-442 | 
| Cow position: | chr6:25217716-25218085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 26, 144 | 
| Conread position: | 74-823 | 
| Cow position: | chr6:55474065-55474842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 783 | 
| Alignm identity: | 553 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 176 | 
| Conread position: | 76-386 | 
| Cow position: | chr6:66548239-66548545 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 23, 73 | 
| Conread position: | 77-672 | 
| Cow position: | chr6:45724383-45723779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 612 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 98 | 
| Conread position: | 77-673 | 
| Cow position: | chr6:52899716-52900317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 612 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 163 | 
| Conread position: | 82-850 | 
| Cow position: | chr6:15276473-15275684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 795 | 
| Alignm identity: | 597 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 154 | 
| Conread position: | 84-850 | 
| Cow position: | chr6:888326-889111 (view UCSC Genome Browser custom track) | 
| Alignm length: | 791 | 
| Alignm identity: | 601 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 160 | 
| Conread position: | 96-850 | 
| Cow position: | chr6:67553022-67553788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 773 | 
| Alignm identity: | 510 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 187, 140 | 
| Conread position: | 101-847 | 
| Cow position: | chr6:1096944-1096182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 777 | 
| Alignm identity: | 515 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 41 | 
| Conread position: | 102-356 | 
| Cow position: | chr6:38672026-38672274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 58, 28 | 
| Conread position: | 103-291 | 
| Cow position: | chr6:68871131-68871320 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 78, 132 | 
| Conread position: | 103-310 | 
| Cow position: | chr6:23880560-23880355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 81, 128 | 
| Conread position: | 103-538 | 
| Cow position: | chr6:38932462-38932025 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 132 | 
| Conread position: | 103-547 | 
| Cow position: | chr6:49826460-49826014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 137 | 
| Conread position: | 103-841 | 
| Cow position: | chr6:14851954-14851207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 759 | 
| Alignm identity: | 553 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 132 | 
| Conread position: | 103-850 | 
| Cow position: | chr6:46947612-46948371 (view UCSC Genome Browser custom track) | 
| Alignm length: | 767 | 
| Alignm identity: | 582 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 22 | 
| Conread position: | 107-419 | 
| Cow position: | chr6:9586861-9587166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 123 | 
| Conread position: | 108-509 | 
| Cow position: | chr6:18520286-18519882 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 128 | 
| Conread position: | 108-833 | 
| Cow position: | chr6:55592854-55593609 (view UCSC Genome Browser custom track) | 
| Alignm length: | 762 | 
| Alignm identity: | 567 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 9 | 
| Conread position: | 108-850 | 
| Cow position: | chr6:53543681-53542927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 765 | 
| Alignm identity: | 584 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 105 | 
| Conread position: | 109-404 | 
| Cow position: | chr6:1402730-1402435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 130 | 
| Conread position: | 109-404 | 
| Cow position: | chr6:1407318-1407023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 130 | 
| Conread position: | 109-434 | 
| Cow position: | chr6:55902020-55902347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 131 | 
| Conread position: | 109-503 | 
| Cow position: | chr6:35883370-35883766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 114 | 
| Conread position: | 109-519 | 
| Cow position: | chr6:49165801-49165392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 48 | 
| Conread position: | 109-849 | 
| Cow position: | chr6:40550900-40550151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 756 | 
| Alignm identity: | 570 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 126 | 
| Conread position: | 110-829 | 
| Cow position: | chr6:65875482-65874753 (view UCSC Genome Browser custom track) | 
| Alignm length: | 738 | 
| Alignm identity: | 525 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 124 | 
| Conread position: | 112-735 | 
| Cow position: | chr6:61829030-61829663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 638 | 
| Alignm identity: | 474 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 128 | 
| Conread position: | 113-530 | 
| Cow position: | chr6:41414540-41414124 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 68, 118 | 
| Conread position: | 114-850 | 
| Cow position: | chr6:14950863-14950104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 765 | 
| Alignm identity: | 567 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 197 | 
| Conread position: | 114-850 | 
| Cow position: | chr6:45480273-45479532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 758 | 
| Alignm identity: | 571 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 126 | 
| Conread position: | 116-584 | 
| Cow position: | chr6:57181626-57182089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 15 | 
| Conread position: | 121-310 | 
| Cow position: | chr6:28701884-28701703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 74, 0 | 
| Conread position: | 121-850 | 
| Cow position: | chr6:50121117-50120377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 750 | 
| Alignm identity: | 564 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 113 | 
| Conread position: | 131-735 | 
| Cow position: | chr6:530060-529459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 618 | 
| Alignm identity: | 443 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 66 | 
| Conread position: | 131-751 | 
| Cow position: | chr6:3573617-3574236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 631 | 
| Alignm identity: | 476 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 68 | 
| Conread position: | 131-850 | 
| Cow position: | chr6:60332163-60332901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 743 | 
| Alignm identity: | 567 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 109 | 
| Conread position: | 133-473 | 
| Cow position: | chr6:1380632-1380295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 50, 24 | 
| Conread position: | 136-760 | 
| Cow position: | chr6:6556786-6557424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 480 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 104 | 
| Conread position: | 137-732 | 
| Cow position: | chr6:58605356-58605961 (view UCSC Genome Browser custom track) | 
| Alignm length: | 618 | 
| Alignm identity: | 450 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 99 | 
| Conread position: | 137-848 | 
| Cow position: | chr6:24632418-24631701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 738 | 
| Alignm identity: | 515 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 20 | 
| Conread position: | 138-847 | 
| Cow position: | chr6:30317114-30316377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 746 | 
| Alignm identity: | 503 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 43, 95 | 
| Conread position: | 138-848 | 
| Cow position: | chr6:9234339-9235066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 733 | 
| Alignm identity: | 552 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 102 | 
| Conread position: | 143-849 | 
| Cow position: | chr6:6182871-6182172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 719 | 
| Alignm identity: | 542 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 14 | 
| Conread position: | 148-391 | 
| Cow position: | chr6:13315476-13315232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 33, 89 | 
| Conread position: | 148-850 | 
| Cow position: | chr6:22044171-22043454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 724 | 
| Alignm identity: | 557 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 87 | 
| Conread position: | 151-711 | 
| Cow position: | chr6:2641387-2641948 (view UCSC Genome Browser custom track) | 
| Alignm length: | 568 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 5e-31 | 
| Alignm gaps (pig, cow): | 30, 89 | 
| Conread position: | 154-431 | 
| Cow position: | chr6:1262725-1263003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 81 | 
| Conread position: | 181-493 | 
| Cow position: | chr6:17927298-17927607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 7 | 
| Conread position: | 181-539 | 
| Cow position: | chr6:39897824-39898180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 55 | 
| Conread position: | 181-765 | 
| Cow position: | chr6:15153985-15154572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 600 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 15 | 
| Conread position: | 181-842 | 
| Cow position: | chr6:58030654-58031318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 677 | 
| Alignm identity: | 510 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 50 | 
| Conread position: | 181-850 | 
| Cow position: | chr6:32419827-32420496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 682 | 
| Alignm identity: | 507 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 44 | 
| Conread position: | 181-850 | 
| Cow position: | chr6:57521048-57521731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 688 | 
| Alignm identity: | 525 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 55 | 
| Conread position: | 182-819 | 
| Cow position: | chr6:1498076-1498726 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 460 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 151, 54 | 
| Conread position: | 183-850 | 
| Cow position: | chr6:55945550-55944886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 680 | 
| Alignm identity: | 442 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 6, 43 | 
| Conread position: | 185-848 | 
| Cow position: | chr6:30077404-30076717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 697 | 
| Alignm identity: | 440 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 148, 49 | 
| Conread position: | 186-729 | 
| Cow position: | chr6:33508144-33508674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 555 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 107, 47 | 
| Conread position: | 196-621 | 
| Cow position: | chr6:2452737-2453164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 137, 40 | 
| Conread position: | 196-841 | 
| Cow position: | chr6:58880104-58880741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 137, 27 | 
| Conread position: | 198-489 | 
| Cow position: | chr6:16699097-16699386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 27 | 
| Conread position: | 206-849 | 
| Cow position: | chr6:31940766-31941422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 510 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 30 | 
| Conread position: | 206-850 | 
| Cow position: | chr6:705905-706554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 494 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 30 | 
| Conread position: | 228-588 | 
| Cow position: | chr6:67211673-67211315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 57 | 
| Conread position: | 230-526 | 
| Cow position: | chr6:49625753-49626047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 106, 53 | 
| Conread position: | 236-380 | 
| Cow position: | chr6:46372897-46372755 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 97, 46 | 
| Conread position: | 236-749 | 
| Cow position: | chr6:67173481-67174003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 525 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 46 | 
| Conread position: | 236-848 | 
| Cow position: | chr6:32427085-32427677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 626 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 40, 48 | 
| Conread position: | 236-850 | 
| Cow position: | chr6:1105223-1104605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 637 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 46 | 
| Conread position: | 236-850 | 
| Cow position: | chr6:4388666-4389268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 625 | 
| Alignm identity: | 469 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 47 | 
| Conread position: | 236-850 | 
| Cow position: | chr6:33983749-33984352 (view UCSC Genome Browser custom track) | 
| Alignm length: | 624 | 
| Alignm identity: | 445 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 217, 87 | 
| Conread position: | 240-769 | 
| Cow position: | chr6:47171012-47171534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 539 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 53 | 
| Conread position: | 241-569 | 
| Cow position: | chr6:40759961-40760281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 51 | 
| Conread position: | 241-584 | 
| Cow position: | chr6:55042190-55041854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 7 | 
| Conread position: | 242-647 | 
| Cow position: | chr6:58016291-58016694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 15 | 
| Conread position: | 243-419 | 
| Cow position: | chr6:40730130-40730305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 90, 39 | 
| Conread position: | 243-850 | 
| Cow position: | chr6:2089216-2089825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 622 | 
| Alignm identity: | 473 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 49 | 
| Conread position: | 243-850 | 
| Cow position: | chr6:12997355-12997972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 621 | 
| Alignm identity: | 478 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 26 | 
| Conread position: | 243-850 | 
| Cow position: | chr6:33809501-33808878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 625 | 
| Alignm identity: | 481 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 39 | 
| Conread position: | 244-764 | 
| Cow position: | chr6:47150035-47149504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 536 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 38 | 
| Conread position: | 245-415 | 
| Cow position: | chr6:10680628-10680459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 172 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 88, 38 | 
| Conread position: | 249-609 | 
| Cow position: | chr6:18970492-18970136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 367 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 33 | 
| Conread position: | 251-849 | 
| Cow position: | chr6:35600620-35601232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 615 | 
| Alignm identity: | 448 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 32 | 
| Conread position: | 254-800 | 
| Cow position: | chr6:38438550-38439113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 419 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 38 | 
| Conread position: | 258-609 | 
| Cow position: | chr6:65892920-65892567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 12 | 
| Conread position: | 266-800 | 
| Cow position: | chr6:7105573-7105027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 554 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 17 | 
| Conread position: | 282-850 | 
| Cow position: | chr6:14897155-14897738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 587 | 
| Alignm identity: | 416 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 171, 46 | 
| Conread position: | 302-850 | 
| Cow position: | chr6:21711695-21712262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 568 | 
| Alignm identity: | 449 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 306-800 | 
| Cow position: | chr6:28481332-28481836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 516 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 46 | 
Show alignments to all cow chromosomes.
