• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Utr1-UTR010044B01
        

               
Conread position:
               
1-223
               

               
Cow position:
               
chrX:6280285-6280065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
35, 102
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chrX:34006704-34006486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
102, 173
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chrX:21767156-21767388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chrX:2117866-2117634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chrX:20741104-20740873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
102, 32
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chrX:40694179-40693880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chrX:47215090-47214795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
101, 55
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chrX:14459882-14459569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chrX:15142635-15142324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 27
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chrX:23453528-23453213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chrX:5281259-5280939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 236
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chrX:17664674-17664348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 239
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chrX:18243829-18243480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 32
               

               
Conread position:
               
1-350
               

               
Cow position:
               
chrX:20725494-20725847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 233
               

               
Conread position:
               
1-351
               

               
Cow position:
               
chrX:30167557-30167202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 124
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chrX:12345460-12345823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-378
               

               
Cow position:
               
chrX:34552915-34553293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 241
               

               
Conread position:
               
1-402
               

               
Cow position:
               
chrX:38150123-38150526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 160
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chrX:9260873-9261286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 234
               

               
Conread position:
               
1-419
               

               
Cow position:
               
chrX:21750977-21750563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 111
               

               
Conread position:
               
1-423
               

               
Cow position:
               
chrX:3465838-3465411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 240
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chrX:5549904-5550339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-431
               

               
Cow position:
               
chrX:22837505-22837940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-450
               

               
Cow position:
               
chrX:13281991-13282444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 82
               

               
Conread position:
               
1-452
               

               
Cow position:
               
chrX:6247678-6247234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 71
               

               
Conread position:
               
1-461
               

               
Cow position:
               
chrX:29094791-29094329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 234
               

               
Conread position:
               
1-463
               

               
Cow position:
               
chrX:12464530-12464999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 238
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chrX:21646757-21646284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 140
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chrX:13071922-13071441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 215
               

               
Conread position:
               
1-476
               

               
Cow position:
               
chrX:13092482-13092001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 215
               

               
Conread position:
               
1-484
               

               
Cow position:
               
chrX:387660-388145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
88, 134
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chrX:43437380-43436879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 242
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chrX:5426613-5427124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 239
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chrX:16023600-16024113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 167
               

               
Conread position:
               
1-520
               

               
Cow position:
               
chrX:11458285-11457766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 44
               

               
Conread position:
               
1-526
               

               
Cow position:
               
chrX:5298717-5298186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-526
               

               
Cow position:
               
chrX:38153184-38152667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 186
               

               
Conread position:
               
1-547
               

               
Cow position:
               
chrX:11951230-11950695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 137
               

               
Conread position:
               
1-564
               

               
Cow position:
               
chrX:24444546-24443963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 254
               

               
Conread position:
               
1-569
               

               
Cow position:
               
chrX:4557861-4558417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 94
               

               
Conread position:
               
1-577
               

               
Cow position:
               
chrX:12185608-12186206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 257
               

               
Conread position:
               
1-584
               

               
Cow position:
               
chrX:16045495-16046085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-584
               

               
Cow position:
               
chrX:29171257-29170669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-600
               

               
Cow position:
               
chrX:27595703-27595092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
617
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 235
               

               
Conread position:
               
1-608
               

               
Cow position:
               
chrX:21892032-21892650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 115
               

               
Conread position:
               
1-609
               

               
Cow position:
               
chrX:5294819-5294203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
450
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 160
               

               
Conread position:
               
1-636
               

               
Cow position:
               
chrX:12997387-12996740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 106
               

               
Conread position:
               
1-643
               

               
Cow position:
               
chrX:6855150-6854539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
464
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
332, 74
               

               
Conread position:
               
1-685
               

               
Cow position:
               
chrX:26756116-26755422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
535
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 238
               

               
Conread position:
               
1-687
               

               
Cow position:
               
chrX:16804342-16803645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
704
               

               
Alignm identity:
               
533
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 149
               

               
Conread position:
               
1-724
               

               
Cow position:
               
chrX:39697292-39698021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
552
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 136
               

               
Conread position:
               
1-727
               

               
Cow position:
               
chrX:4327163-4326419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 22
               

               
Conread position:
               
1-733
               

               
Cow position:
               
chrX:23222505-23221776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
563
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 243
               

               
Conread position:
               
1-765
               

               
Cow position:
               
chrX:6236316-6235551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
783
               

               
Alignm identity:
               
599
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 135
               

               
Conread position:
               
1-772
               

               
Cow position:
               
chrX:28606560-28605784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
792
               

               
Alignm identity:
               
571
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 13
               

               
Conread position:
               
1-775
               

               
Cow position:
               
chrX:43074427-43075190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
793
               

               
Alignm identity:
               
563
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 161
               

               
Conread position:
               
1-781
               

               
Cow position:
               
chrX:9095166-9095958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
799
               

               
Alignm identity:
               
570
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 238
               

               
Conread position:
               
1-787
               

               
Cow position:
               
chrX:32064644-32063844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
809
               

               
Alignm identity:
               
616
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-800
               

               
Cow position:
               
chrX:5360533-5361350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
822
               

               
Alignm identity:
               
612
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-804
               

               
Cow position:
               
chrX:15122638-15121821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
824
               

               
Alignm identity:
               
605
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 248
               

               
Conread position:
               
1-812
               

               
Cow position:
               
chrX:17891066-17891902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
843
               

               
Alignm identity:
               
629
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 213
               

               
Conread position:
               
1-819
               

               
Cow position:
               
chrX:26231235-26230396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
844
               

               
Alignm identity:
               
649
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-820
               

               
Cow position:
               
chrX:20357476-20356632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
849
               

               
Alignm identity:
               
640
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 238
               

               
Conread position:
               
1-826
               

               
Cow position:
               
chrX:29098943-29099785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
851
               

               
Alignm identity:
               
642
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 238
               

               
Conread position:
               
1-838
               

               
Cow position:
               
chrX:23388024-23387157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
877
               

               
Alignm identity:
               
665
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 253
               

               
Conread position:
               
1-841
               

               
Cow position:
               
chrX:1549489-1550349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
662
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 121
               

               
Conread position:
               
1-841
               

               
Cow position:
               
chrX:10413440-10412589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
879
               

               
Alignm identity:
               
612
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 200
               

               
Conread position:
               
1-841
               

               
Cow position:
               
chrX:22492560-22493391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
862
               

               
Alignm identity:
               
647
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 160
               

               
Conread position:
               
1-842
               

               
Cow position:
               
chrX:26442724-26441874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
652
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 215
               

               
Conread position:
               
1-842
               

               
Cow position:
               
chrX:32145733-32144883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
863
               

               
Alignm identity:
               
665
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 243
               

               
Conread position:
               
1-843
               

               
Cow position:
               
chrX:16809289-16808428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
868
               

               
Alignm identity:
               
658
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 149
               

               
Conread position:
               
1-843
               

               
Cow position:
               
chrX:24412551-24413416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
657
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 128
               

               
Conread position:
               
1-843
               

               
Cow position:
               
chrX:29891630-29892472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
626
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 147
               

               
Conread position:
               
1-847
               

               
Cow position:
               
chrX:30137332-30136476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
878
               

               
Alignm identity:
               
636
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 234
               

               
Conread position:
               
1-848
               

               
Cow position:
               
chrX:16781806-16782671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
659
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 241
               

               
Conread position:
               
1-848
               

               
Cow position:
               
chrX:24175422-24174561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
600
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 240
               

               
Conread position:
               
1-849
               

               
Cow position:
               
chrX:4906473-4905598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
883
               

               
Alignm identity:
               
672
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 244
               

               
Conread position:
               
1-849
               

               
Cow position:
               
chrX:12308239-12307365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
879
               

               
Alignm identity:
               
659
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:322429-323308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
886
               

               
Alignm identity:
               
661
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 253
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:672468-671610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
664
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 135
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:2480105-2479234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
877
               

               
Alignm identity:
               
656
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:2560424-2559567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
664
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 234
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:2578944-2579812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
665
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:3360346-3361214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
663
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 47
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:3373328-3372460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
657
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 234
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:5321188-5320325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
655
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 123
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:5332908-5332044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
652
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:5354777-5353910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
656
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 243
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:6580458-6581327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
659
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:7552278-7551410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
670
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 243
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:8640311-8641181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
667
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:9010857-9011720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
653
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:10867326-10866474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
664
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 134
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:11146813-11145944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
657
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 244
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:11462470-11461603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
658
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:12144622-12145495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
878
               

               
Alignm identity:
               
662
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:12359414-12360281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
661
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 122
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:13406762-13405897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
658
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 80
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:13929210-13928358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
871
               

               
Alignm identity:
               
653
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:14125721-14124853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
668
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 228
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:14597380-14598239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
654
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:14782822-14781953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
650
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:15261093-15260226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
660
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 244
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:15978428-15977560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
663
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:16278182-16279045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
668
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 239
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:16360479-16359616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
661
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:16525327-16526182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
871
               

               
Alignm identity:
               
651
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 184
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:16702207-16703064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
649
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 159
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:16710492-16711349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
644
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 159
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:17054094-17054962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
662
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:17782028-17782892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
664
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 160
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:18657281-18656412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
672
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 237
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:18951207-18950343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
671
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 215
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:19398301-19399171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
679
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:19474625-19473767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
666
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:19608200-19609069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
672
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:21226004-21226870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
664
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 243
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:21342919-21343787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
655
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:21389101-21389971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
644
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 243
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:21581966-21582835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
673
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 18
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:21793114-21793984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
671
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:21832415-21833262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
648
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 80
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:22539511-22538640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
678
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 239
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:22565161-22564294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
668
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:22611933-22612778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
645
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 229
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:22810419-22811282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
661
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 240
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:23021839-23022706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
651
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 21
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:23134122-23134971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
641
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 236
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:23573284-23572423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
670
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 148
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:24468599-24467732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
663
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 235
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:24589205-24588343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
665
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 239
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:24770333-24769464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
676
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:25450858-25451717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
651
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 239
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:26274669-26275531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
871
               

               
Alignm identity:
               
666
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 190
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:27423745-27422891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
648
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 216
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:27591497-27590641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
665
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 234
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:28753813-28752947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
665
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:29911858-29912732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
881
               

               
Alignm identity:
               
664
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 244
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:29916820-29915953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
664
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 92
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:29941704-29942543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
613
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 200
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:30164705-30163845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
643
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 42
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:30181401-30180534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
668
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 240
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:30229588-30228721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
659
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 243
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:31201364-31202234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
665
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 243
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:31495263-31496129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
661
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 49
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:31728000-31728856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
659
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 126
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:31979311-31978448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
679
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:36194619-36195485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
875
               

               
Alignm identity:
               
663
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 238
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:36536206-36535342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
659
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 243
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:37851669-37852532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
878
               

               
Alignm identity:
               
667
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 30
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:39561136-39560259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
883
               

               
Alignm identity:
               
668
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 129
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:39713076-39713944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
670
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 128
               

               
Conread position:
               
1-850
               

               
Cow position:
               
chrX:41848010-41847141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
874
               

               
Alignm identity:
               
677
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 286
               

               
Conread position:
               
2-240
               

               
Cow position:
               
chrX:36690930-36690678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
63, 158
               

               
Conread position:
               
2-279
               

               
Cow position:
               
chrX:20133629-20133370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
2-838
               

               
Cow position:
               
chrX:23395131-23395988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
862
               

               
Alignm identity:
               
660
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 240
               

               
Conread position:
               
2-848
               

               
Cow position:
               
chrX:21591818-21592682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
689
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 79
               

               
Conread position:
               
2-850
               

               
Cow position:
               
chrX:5247918-5248778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
642
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 122
               

               
Conread position:
               
2-850
               

               
Cow position:
               
chrX:11976922-11976053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
877
               

               
Alignm identity:
               
662
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 30
               

               
Conread position:
               
2-850
               

               
Cow position:
               
chrX:16035983-16035120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
876
               

               
Alignm identity:
               
634
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 232
               

               
Conread position:
               
2-850
               

               
Cow position:
               
chrX:16854841-16853997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
636
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 237
               

               
Conread position:
               
2-850
               

               
Cow position:
               
chrX:27983830-27982977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
630
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 243
               

               
Conread position:
               
3-850
               

               
Cow position:
               
chrX:23039456-23038604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
644
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 122
               

               
Conread position:
               
4-567
               

               
Cow position:
               
chrX:18462876-18463446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 236
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chrX:28648354-28648047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 237
               

               
Conread position:
               
5-366
               

               
Cow position:
               
chrX:12312475-12312108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 240
               

               
Conread position:
               
5-454
               

               
Cow position:
               
chrX:11074619-11074181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 77
               

               
Conread position:
               
5-529
               

               
Cow position:
               
chrX:13415899-13415385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 63
               

               
Conread position:
               
5-750
               

               
Cow position:
               
chrX:4767225-4767976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
554
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 244
               

               
Conread position:
               
5-841
               

               
Cow position:
               
chrX:23279554-23280393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
858
               

               
Alignm identity:
               
658
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 239
               

               
Conread position:
               
5-841
               

               
Cow position:
               
chrX:30090507-30089669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
853
               

               
Alignm identity:
               
642
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 143
               

               
Conread position:
               
5-848
               

               
Cow position:
               
chrX:20651950-20652801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
586
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
5-850
               

               
Cow position:
               
chrX:2381993-2382860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
873
               

               
Alignm identity:
               
633
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 224
               

               
Conread position:
               
5-850
               

               
Cow position:
               
chrX:27317758-27318624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
871
               

               
Alignm identity:
               
671
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 233
               

               
Conread position:
               
6-468
               

               
Cow position:
               
chrX:21317976-21318448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 61
               

               
Conread position:
               
6-721
               

               
Cow position:
               
chrX:26623274-26622565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
729
               

               
Alignm identity:
               
536
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 118
               

               
Conread position:
               
6-840
               

               
Cow position:
               
chrX:26507784-26508605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
855
               

               
Alignm identity:
               
570
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 147
               

               
Conread position:
               
7-327
               

               
Cow position:
               
chrX:37814680-37815004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 237
               

               
Conread position:
               
7-423
               

               
Cow position:
               
chrX:3418687-3418267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 122
               

               
Conread position:
               
7-444
               

               
Cow position:
               
chrX:2487182-2487614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 83
               

               
Conread position:
               
7-609
               

               
Cow position:
               
chrX:33829574-33830179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
614
               

               
Alignm identity:
               
455
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 59
               

               
Conread position:
               
7-759
               

               
Cow position:
               
chrX:7484336-7485106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
775
               

               
Alignm identity:
               
581
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 232
               

               
Conread position:
               
7-850
               

               
Cow position:
               
chrX:2813946-2813089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
658
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 237
               

               
Conread position:
               
7-850
               

               
Cow position:
               
chrX:4623424-4622561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
659
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 237
               

               
Conread position:
               
7-850
               

               
Cow position:
               
chrX:5865674-5866539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
659
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 233
               

               
Conread position:
               
7-850
               

               
Cow position:
               
chrX:7754436-7755294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
661
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 122
               

               
Conread position:
               
7-850
               

               
Cow position:
               
chrX:10529255-10528381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
882
               

               
Alignm identity:
               
659
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 232
               

               
Conread position:
               
7-850
               

               
Cow position:
               
chrX:14461848-14462702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
644
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 11
               

               
Conread position:
               
7-850
               

               
Cow position:
               
chrX:15622002-15621139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
655
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 232
               

               
Conread position:
               
7-850
               

               
Cow position:
               
chrX:18221944-18222806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
872
               

               
Alignm identity:
               
667
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 16
               

               
Conread position:
               
7-850
               

               
Cow position:
               
chrX:28519183-28518327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
641
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 229
               

               
Conread position:
               
7-850
               

               
Cow position:
               
chrX:28587511-28588364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
871
               

               
Alignm identity:
               
647
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 238
               

               
Conread position:
               
7-850
               

               
Cow position:
               
chrX:30053939-30053075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
869
               

               
Alignm identity:
               
662
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 232
               

               
Conread position:
               
7-850
               

               
Cow position:
               
chrX:30166130-30165279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
627
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 74
               

               
Conread position:
               
10-312
               

               
Cow position:
               
chrX:22577915-22577615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
90, 137
               

               
Conread position:
               
10-524
               

               
Cow position:
               
chrX:5640349-5639838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 183
               

               
Conread position:
               
10-847
               

               
Cow position:
               
chrX:28667417-28666562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
878
               

               
Alignm identity:
               
557
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 160
               

               
Conread position:
               
10-848
               

               
Cow position:
               
chrX:35532388-35533245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
864
               

               
Alignm identity:
               
662
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 234
               

               
Conread position:
               
10-850
               

               
Cow position:
               
chrX:3406804-3405960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
870
               

               
Alignm identity:
               
607
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 115
               

               
Conread position:
               
10-850
               

               
Cow position:
               
chrX:4342284-4343144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
866
               

               
Alignm identity:
               
661
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 234
               

               
Conread position:
               
11-273
               

               
Cow position:
               
chrX:3144338-3144601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
88, 24
               

               
Conread position:
               
11-421
               

               
Cow position:
               
chrX:35023276-35023674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 100
               

               
Conread position:
               
11-472
               

               
Cow position:
               
chrX:39564763-39564287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 242
               

               
Conread position:
               
11-657
               

               
Cow position:
               
chrX:40828562-40827919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
656
               

               
Alignm identity:
               
488
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
11-850
               

               
Cow position:
               
chrX:22077807-22076949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
865
               

               
Alignm identity:
               
667
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 228
               

               
Conread position:
               
13-328
               

               
Cow position:
               
chrX:9086245-9086564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 231
               

               
Conread position:
               
13-850
               

               
Cow position:
               
chrX:3082609-3081738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
878
               

               
Alignm identity:
               
652
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 237
               

               
Conread position:
               
18-848
               

               
Cow position:
               
chrX:26530515-26531356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
855
               

               
Alignm identity:
               
659
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 144
               

               
Conread position:
               
18-850
               

               
Cow position:
               
chrX:27304471-27305322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
858
               

               
Alignm identity:
               
648
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 226
               

               
Conread position:
               
19-263
               

               
Cow position:
               
chrX:360070-360320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 220
               

               
Conread position:
               
19-273
               

               
Cow position:
               
chrX:22126240-22125985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
80, 142
               

               
Conread position:
               
19-492
               

               
Cow position:
               
chrX:302663-303137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
65, 117
               

               
Conread position:
               
23-695
               

               
Cow position:
               
chrX:7120153-7120837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
689
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 216
               

               
Conread position:
               
23-838
               

               
Cow position:
               
chrX:2009161-2008329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
847
               

               
Alignm identity:
               
599
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 65
               

               
Conread position:
               
24-473
               

               
Cow position:
               
chrX:41880575-41880122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 220
               

               
Conread position:
               
24-613
               

               
Cow position:
               
chrX:24734216-24734807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
456
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 111
               

               
Conread position:
               
25-827
               

               
Cow position:
               
chrX:26446647-26447449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
819
               

               
Alignm identity:
               
612
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 203
               

               
Conread position:
               
26-798
               

               
Cow position:
               
chrX:3581486-3582285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
807
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 215
               

               
Conread position:
               
27-588
               

               
Cow position:
               
chrX:37487497-37488067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
444
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 48
               

               
Conread position:
               
27-632
               

               
Cow position:
               
chrX:24462889-24462278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
619
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 212
               

               
Conread position:
               
30-850
               

               
Cow position:
               
chrX:29225030-29225871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
846
               

               
Alignm identity:
               
652
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 209
               

               
Conread position:
               
31-468
               

               
Cow position:
               
chrX:19877384-19877838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 213
               

               
Conread position:
               
35-607
               

               
Cow position:
               
chrX:15349647-15349079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
298, 164
               

               
Conread position:
               
43-730
               

               
Cow position:
               
chrX:26617696-26618390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
706
               

               
Alignm identity:
               
523
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 196
               

               
Conread position:
               
45-727
               

               
Cow position:
               
chrX:34094273-34094969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
701
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 194
               

               
Conread position:
               
46-804
               

               
Cow position:
               
chrX:35287014-35287783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
552
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 100
               

               
Conread position:
               
47-850
               

               
Cow position:
               
chrX:7096026-7096851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
831
               

               
Alignm identity:
               
627
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 194
               

               
Conread position:
               
51-533
               

               
Cow position:
               
chrX:38588338-38587853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 191
               

               
Conread position:
               
51-696
               

               
Cow position:
               
chrX:27497405-27498060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 193
               

               
Conread position:
               
55-850
               

               
Cow position:
               
chrX:9127632-9128449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
822
               

               
Alignm identity:
               
611
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 189
               

               
Conread position:
               
55-850
               

               
Cow position:
               
chrX:9170028-9169221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
816
               

               
Alignm identity:
               
620
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 184
               

               
Conread position:
               
55-850
               

               
Cow position:
               
chrX:29908632-29907809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
828
               

               
Alignm identity:
               
610
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 191
               

               
Conread position:
               
56-850
               

               
Cow position:
               
chrX:39547981-39548792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
820
               

               
Alignm identity:
               
623
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 183
               

               
Conread position:
               
59-499
               

               
Cow position:
               
chrX:45112388-45112828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 180
               

               
Conread position:
               
59-635
               

               
Cow position:
               
chrX:30436037-30435448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 180
               

               
Conread position:
               
59-768
               

               
Cow position:
               
chrX:30965405-30964678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
732
               

               
Alignm identity:
               
547
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 180
               

               
Conread position:
               
59-847
               

               
Cow position:
               
chrX:29880698-29879890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
817
               

               
Alignm identity:
               
612
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 177
               

               
Conread position:
               
59-850
               

               
Cow position:
               
chrX:20800370-20801166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
814
               

               
Alignm identity:
               
578
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 180
               

               
Conread position:
               
61-386
               

               
Cow position:
               
chrX:4481280-4481612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 182
               

               
Conread position:
               
66-288
               

               
Cow position:
               
chrX:4063668-4063446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 83
               

               
Conread position:
               
72-573
               

               
Cow position:
               
chrX:32129374-32129878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 109
               

               
Conread position:
               
72-850
               

               
Cow position:
               
chrX:16041082-16040288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
804
               

               
Alignm identity:
               
601
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 63
               

               
Conread position:
               
73-850
               

               
Cow position:
               
chrX:30059492-30060281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
806
               

               
Alignm identity:
               
577
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 78
               

               
Conread position:
               
75-850
               

               
Cow position:
               
chrX:11409737-11408941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
801
               

               
Alignm identity:
               
610
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 169
               

               
Conread position:
               
76-411
               

               
Cow position:
               
chrX:2501187-2501526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 152
               

               
Conread position:
               
79-850
               

               
Cow position:
               
chrX:21767409-21768197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
797
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 151
               

               
Conread position:
               
81-424
               

               
Cow position:
               
chrX:24928398-24928746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 158
               

               
Conread position:
               
82-850
               

               
Cow position:
               
chrX:28879973-28879213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
786
               

               
Alignm identity:
               
594
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 158
               

               
Conread position:
               
84-385
               

               
Cow position:
               
chrX:46295974-46296278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 155
               

               
Conread position:
               
86-850
               

               
Cow position:
               
chrX:42223142-42222395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
578
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 149
               

               
Conread position:
               
94-848
               

               
Cow position:
               
chrX:6044826-6044098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
774
               

               
Alignm identity:
               
522
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 36
               

               
Conread position:
               
95-832
               

               
Cow position:
               
chrX:30135693-30134964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
542
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 141
               

               
Conread position:
               
95-850
               

               
Cow position:
               
chrX:41155932-41156704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
778
               

               
Alignm identity:
               
586
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 146
               

               
Conread position:
               
97-850
               

               
Cow position:
               
chrX:37080891-37080126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
584
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 138
               

               
Conread position:
               
102-397
               

               
Cow position:
               
chrX:22119377-22119081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 12
               

               
Conread position:
               
102-458
               

               
Cow position:
               
chrX:39387839-39387482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
72, 182
               

               
Conread position:
               
102-750
               

               
Cow position:
               
chrX:28132733-28133382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
663
               

               
Alignm identity:
               
480
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 5
               

               
Conread position:
               
102-801
               

               
Cow position:
               
chrX:10410438-10409747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
714
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
53, 64
               

               
Conread position:
               
102-850
               

               
Cow position:
               
chrX:8435570-8434810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
769
               

               
Alignm identity:
               
575
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 138
               

               
Conread position:
               
103-423
               

               
Cow position:
               
chrX:1948800-1948479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 137
               

               
Conread position:
               
103-652
               

               
Cow position:
               
chrX:24321998-24321440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 98
               

               
Conread position:
               
103-848
               

               
Cow position:
               
chrX:22579747-22578998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
766
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 127
               

               
Conread position:
               
103-850
               

               
Cow position:
               
chrX:21494065-21494808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
774
               

               
Alignm identity:
               
549
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 137
               

               
Conread position:
               
103-850
               

               
Cow position:
               
chrX:30836016-30836766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
766
               

               
Alignm identity:
               
581
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 132
               

               
Conread position:
               
105-584
               

               
Cow position:
               
chrX:22616743-22616259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 136
               

               
Conread position:
               
108-783
               

               
Cow position:
               
chrX:18024358-18023668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
695
               

               
Alignm identity:
               
527
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 123
               

               
Conread position:
               
109-325
               

               
Cow position:
               
chrX:31972486-31972274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
78, 36
               

               
Conread position:
               
109-500
               

               
Cow position:
               
chrX:30286046-30286434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 126
               

               
Conread position:
               
109-850
               

               
Cow position:
               
chrX:7572026-7572774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
760
               

               
Alignm identity:
               
564
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 120
               

               
Conread position:
               
109-850
               

               
Cow position:
               
chrX:38962214-38961453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
770
               

               
Alignm identity:
               
585
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 129
               

               
Conread position:
               
118-850
               

               
Cow position:
               
chrX:34221424-34222143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
762
               

               
Alignm identity:
               
547
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 121
               

               
Conread position:
               
121-850
               

               
Cow position:
               
chrX:5290037-5289293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
750
               

               
Alignm identity:
               
570
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 115
               

               
Conread position:
               
121-850
               

               
Cow position:
               
chrX:24293016-24292286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
751
               

               
Alignm identity:
               
559
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 107
               

               
Conread position:
               
121-850
               

               
Cow position:
               
chrX:40070956-40070217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
747
               

               
Alignm identity:
               
562
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
122-850
               

               
Cow position:
               
chrX:2047765-2048505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
749
               

               
Alignm identity:
               
567
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 35
               

               
Conread position:
               
122-850
               

               
Cow position:
               
chrX:27754073-27754822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
755
               

               
Alignm identity:
               
571
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 116
               

               
Conread position:
               
123-749
               

               
Cow position:
               
chrX:25818166-25817537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
639
               

               
Alignm identity:
               
481
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 60
               

               
Conread position:
               
123-850
               

               
Cow position:
               
chrX:2184889-2185633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
767
               

               
Alignm identity:
               
502
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 108
               

               
Conread position:
               
125-735
               

               
Cow position:
               
chrX:24345700-24346320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
625
               

               
Alignm identity:
               
474
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 115
               

               
Conread position:
               
136-850
               

               
Cow position:
               
chrX:38231606-38230874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
737
               

               
Alignm identity:
               
556
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 105
               

               
Conread position:
               
148-386
               

               
Cow position:
               
chrX:41305514-41305275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
31, 87
               

               
Conread position:
               
148-507
               

               
Cow position:
               
chrX:9067745-9068100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
185, 86
               

               
Conread position:
               
149-584
               

               
Cow position:
               
chrX:9535219-9535655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 8
               

               
Conread position:
               
149-584
               

               
Cow position:
               
chrX:9836588-9837027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 8
               

               
Conread position:
               
149-785
               

               
Cow position:
               
chrX:24316491-24317152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
501
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 86
               

               
Conread position:
               
151-829
               

               
Cow position:
               
chrX:29082753-29083439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
699
               

               
Alignm identity:
               
529
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 84
               

               
Conread position:
               
153-476
               

               
Cow position:
               
chrX:4134234-4133910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 87
               

               
Conread position:
               
154-850
               

               
Cow position:
               
chrX:29759381-29760080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 81
               

               
Conread position:
               
157-353
               

               
Cow position:
               
chrX:39694492-39694684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
24, 76
               

               
Conread position:
               
174-494
               

               
Cow position:
               
chrX:45042377-45042068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 13
               

               
Conread position:
               
181-414
               

               
Cow position:
               
chrX:15176426-15176196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
152, 50
               

               
Conread position:
               
181-635
               

               
Cow position:
               
chrX:20741569-20742022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 56
               

               
Conread position:
               
181-674
               

               
Cow position:
               
chrX:5375565-5375068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 55
               

               
Conread position:
               
181-750
               

               
Cow position:
               
chrX:29287707-29288279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 52
               

               
Conread position:
               
181-850
               

               
Cow position:
               
chrX:23342280-23341599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
528
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 45
               

               
Conread position:
               
181-850
               

               
Cow position:
               
chrX:27615524-27616196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
684
               

               
Alignm identity:
               
525
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 55
               

               
Conread position:
               
182-850
               

               
Cow position:
               
chrX:30200275-30199599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
686
               

               
Alignm identity:
               
524
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 49
               

               
Conread position:
               
183-472
               

               
Cow position:
               
chrX:25449199-25449488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
151, 14
               

               
Conread position:
               
183-831
               

               
Cow position:
               
chrX:5365877-5365225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 16
               

               
Conread position:
               
188-850
               

               
Cow position:
               
chrX:18193409-18194083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
681
               

               
Alignm identity:
               
534
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 10
               

               
Conread position:
               
190-533
               

               
Cow position:
               
chrX:15590706-15590371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 35
               

               
Conread position:
               
194-491
               

               
Cow position:
               
chrX:37839872-37840167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 42
               

               
Conread position:
               
195-609
               

               
Cow position:
               
chrX:19396957-19397369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
141, 29
               

               
Conread position:
               
195-850
               

               
Cow position:
               
chrX:3650102-3649430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
679
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 41
               

               
Conread position:
               
195-850
               

               
Cow position:
               
chrX:20953257-20953926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
674
               

               
Alignm identity:
               
500
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 89
               

               
Conread position:
               
197-507
               

               
Cow position:
               
chrX:41906004-41905695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
136, 8
               

               
Conread position:
               
206-800
               

               
Cow position:
               
chrX:21661754-21662376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
461
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 30
               

               
Conread position:
               
206-850
               

               
Cow position:
               
chrX:5647368-5646711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 30
               

               
Conread position:
               
206-850
               

               
Cow position:
               
chrX:23985986-23986643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
512
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 30
               

               
Conread position:
               
207-524
               

               
Cow position:
               
chrX:31964667-31964978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 22
               

               
Conread position:
               
208-840
               

               
Cow position:
               
chrX:36691580-36692217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 77
               

               
Conread position:
               
218-717
               

               
Cow position:
               
chrX:6656269-6655783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 15
               

               
Conread position:
               
230-850
               

               
Cow position:
               
chrX:29849860-29849236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 52
               

               
Conread position:
               
232-848
               

               
Cow position:
               
chrX:15151908-15151285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
468
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 85
               

               
Conread position:
               
233-850
               

               
Cow position:
               
chrX:38228549-38227918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
496
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 8
               

               
Conread position:
               
235-850
               

               
Cow position:
               
chrX:21685372-21686012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
643
               

               
Alignm identity:
               
494
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 188
               

               
Conread position:
               
236-525
               

               
Cow position:
               
chrX:13912179-13911892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
115, 56
               

               
Conread position:
               
236-561
               

               
Cow position:
               
chrX:864871-865195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 46
               

               
Conread position:
               
236-661
               

               
Cow position:
               
chrX:17228738-17229160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 46
               

               
Conread position:
               
236-776
               

               
Cow position:
               
chrX:21818685-21818165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 31
               

               
Conread position:
               
236-827
               

               
Cow position:
               
chrX:16085895-16085291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
606
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 46
               

               
Conread position:
               
236-850
               

               
Cow position:
               
chrX:6371943-6372574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
486
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 46
               

               
Conread position:
               
236-850
               

               
Cow position:
               
chrX:7276727-7277327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 46
               

               
Conread position:
               
236-850
               

               
Cow position:
               
chrX:9642665-9642039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
492
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 46
               

               
Conread position:
               
236-850
               

               
Cow position:
               
chrX:14802056-14801425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
635
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 46
               

               
Conread position:
               
236-850
               

               
Cow position:
               
chrX:21414630-21415260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 46
               

               
Conread position:
               
236-850
               

               
Cow position:
               
chrX:27758472-27759100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 46
               

               
Conread position:
               
236-850
               

               
Cow position:
               
chrX:34760829-34761459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
632
               

               
Alignm identity:
               
477
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 36
               

               
Conread position:
               
238-431
               

               
Cow position:
               
chrX:32585302-32585113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
95, 12
               

               
Conread position:
               
238-846
               

               
Cow position:
               
chrX:28633689-28633087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
616
               

               
Alignm identity:
               
452
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 44
               

               
Conread position:
               
241-749
               

               
Cow position:
               
chrX:502919-502429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 42
               

               
Conread position:
               
241-850
               

               
Cow position:
               
chrX:22869587-22870215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
631
               

               
Alignm identity:
               
482
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 41
               

               
Conread position:
               
241-850
               

               
Cow position:
               
chrX:44193668-44193047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
469
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 40
               

               
Conread position:
               
243-633
               

               
Cow position:
               
chrX:9228131-9227735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 50
               

               
Conread position:
               
243-850
               

               
Cow position:
               
chrX:20020342-20020970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
485
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 39
               

               
Conread position:
               
243-850
               

               
Cow position:
               
chrX:30172936-30172314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
626
               

               
Alignm identity:
               
466
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 39
               

               
Conread position:
               
245-508
               

               
Cow position:
               
chrX:23523021-23522766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
89, 50
               

               
Conread position:
               
259-609
               

               
Cow position:
               
chrX:13056812-13057165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
74, 197
               

               
Conread position:
               
262-446
               

               
Cow position:
               
chrX:900841-900656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 24
               

               
Conread position:
               
263-587
               

               
Cow position:
               
chrX:8104716-8104393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 20
               

               
Conread position:
               
275-413
               

               
Cow position:
               
chrX:42009396-42009534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
58, 8
               

               
Conread position:
               
277-765
               

               
Cow position:
               
chrX:4406689-4407184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 6
               

               
Conread position:
               
277-850
               

               
Cow position:
               
chrX:34442624-34442049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 6
               

               
Conread position:
               
277-850
               

               
Cow position:
               
chrX:45401198-45400648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
588
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 6
               

               
Conread position:
               
278-725
               

               
Cow position:
               
chrX:6201337-6201788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 201
               

               
Conread position:
               
282-538
               

               
Cow position:
               
chrX:27028939-27029196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 206
               

               
Conread position:
               
283-490
               

               
Cow position:
               
chrX:721668-721877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
284-824
               

               
Cow position:
               
chrX:15569066-15568527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 196
               
Show alignments to all cow chromosomes.