Cow genome map

Conread name: Utr1-UTR010045E09

Conread position: 2-250
Cow position:
Alignm length: 250
Alignm identity: 165
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 108, 93

Conread position: 3-422
Cow position:
Alignm length: 424
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 295, 53

Conread position: 3-563
Cow position:
Alignm length: 583
Alignm identity: 371
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 119, 20

Conread position: 4-549
Cow position:
Alignm length: 562
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 86

Conread position: 4-549
Cow position:
Alignm length: 555
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 86

Conread position: 5-161
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 5-486
Cow position:
Alignm length: 493
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 85

Conread position: 5-533
Cow position:
Alignm length: 536
Alignm identity: 327
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 270, 85

Conread position: 5-549
Cow position:
Alignm length: 553
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 29

Conread position: 5-549
Cow position:
Alignm length: 555
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 85

Conread position: 5-561
Cow position:
Alignm length: 580
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 65

Conread position: 5-563
Cow position:
Alignm length: 569
Alignm identity: 444
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 85

Conread position: 5-564
Cow position:
Alignm length: 571
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 90

Conread position: 6-145
Cow position:
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 84, 0

Conread position: 6-228
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 83, 0

Conread position: 6-252
Cow position:
Alignm length: 247
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 0

Conread position: 6-281
Cow position:
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 6-284
Cow position:
Alignm length: 279
Alignm identity: 204
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 66, 0

Conread position: 6-325
Cow position:
Alignm length: 321
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-356
Cow position:
Alignm length: 352
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-374
Cow position:
Alignm length: 372
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 26

Conread position: 6-454
Cow position:
Alignm length: 455
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 13

Conread position: 6-487
Cow position:
Alignm length: 492
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 80

Conread position: 6-522
Cow position:
Alignm length: 531
Alignm identity: 391
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 18

Conread position: 6-530
Cow position:
Alignm length: 534
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-536
Cow position:
Alignm length: 546
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 83

Conread position: 6-538
Cow position:
Alignm length: 541
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-538
Cow position:
Alignm length: 541
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-539
Cow position:
Alignm length: 545
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 86

Conread position: 6-548
Cow position:
Alignm length: 553
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 84

Conread position: 6-549
Cow position:
Alignm length: 553
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 84

Conread position: 6-549
Cow position:
Alignm length: 555
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 227, 84

Conread position: 6-549
Cow position:
Alignm length: 553
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 409
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 84

Conread position: 6-557
Cow position:
Alignm length: 562
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-562
Cow position:
Alignm length: 577
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 97

Conread position: 6-563
Cow position:
Alignm length: 570
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 83

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-563
Cow position:
Alignm length: 566
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 13

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 89

Conread position: 6-563
Cow position:
Alignm length: 569
Alignm identity: 440
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 341

Conread position: 6-564
Cow position:
Alignm length: 572
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 329, 84

Conread position: 6-564
Cow position:
Alignm length: 569
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 43

Conread position: 6-566
Cow position:
Alignm length: 571
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-567
Cow position:
Alignm length: 570
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 8

Conread position: 6-567
Cow position:
Alignm length: 572
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 84

Conread position: 9-263
Cow position:
Alignm length: 255
Alignm identity: 194
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 85, 0

Conread position: 9-552
Cow position:
Alignm length: 570
Alignm identity: 408
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 75

Conread position: 9-563
Cow position:
Alignm length: 564
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 86

Conread position: 10-221
Cow position:
Alignm length: 212
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 0

Conread position: 10-378
Cow position:
Alignm length: 374
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 86

Conread position: 10-535
Cow position:
Alignm length: 536
Alignm identity: 342
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 243, 85

Conread position: 10-563
Cow position:
Alignm length: 565
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 9

Conread position: 10-565
Cow position:
Alignm length: 565
Alignm identity: 375
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 74

Conread position: 12-263
Cow position:
Alignm length: 252
Alignm identity: 174
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 12-557
Cow position:
Alignm length: 557
Alignm identity: 397
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 17

Conread position: 12-563
Cow position:
Alignm length: 556
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 83

Conread position: 13-564
Cow position:
Alignm length: 560
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 332, 83

Conread position: 15-523
Cow position:
Alignm length: 524
Alignm identity: 344
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 80, 114

Conread position: 15-549
Cow position:
Alignm length: 545
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 30

Conread position: 15-562
Cow position:
Alignm length: 558
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 75

Conread position: 19-549
Cow position:
Alignm length: 541
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 279, 71

Conread position: 21-403
Cow position:
Alignm length: 387
Alignm identity: 269
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 178, 69

Conread position: 22-261
Cow position:
Alignm length: 240
Alignm identity: 165
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 22-359
Cow position:
Alignm length: 338
Alignm identity: 223
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 109, 0

Conread position: 22-562
Cow position:
Alignm length: 553
Alignm identity: 365
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 62, 75

Conread position: 25-539
Cow position:
Alignm length: 527
Alignm identity: 324
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 65

Conread position: 32-505
Cow position:
Alignm length: 480
Alignm identity: 304
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 329, 66

Conread position: 32-536
Cow position:
Alignm length: 519
Alignm identity: 364
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 22

Conread position: 33-550
Cow position:
Alignm length: 528
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 240

Conread position: 36-558
Cow position:
Alignm length: 531
Alignm identity: 384
Alignm E-value: 0
Alignm gaps (pig, cow): 266, 61

Conread position: 38-558
Cow position:
Alignm length: 544
Alignm identity: 340
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 7, 53

Conread position: 46-564
Cow position:
Alignm length: 533
Alignm identity: 344
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 225, 49

Conread position: 49-283
Cow position:
Alignm length: 238
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 47

Conread position: 57-422
Cow position:
Alignm length: 370
Alignm identity: 250
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 145, 46

Conread position: 64-306
Cow position:
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 31

Conread position: 73-547
Cow position:
Alignm length: 480
Alignm identity: 317
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 288, 23

Conread position: 89-516
Cow position:
Alignm length: 453
Alignm identity: 329
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 178

Conread position: 89-563
Cow position:
Alignm length: 483
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 213, 117

Conread position: 93-533
Cow position:
Alignm length: 453
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 20

Conread position: 96-564
Cow position:
Alignm length: 488
Alignm identity: 322
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 27, 158

Conread position: 100-564
Cow position:
Alignm length: 475
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 65

Conread position: 110-563
Cow position:
Alignm length: 467
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 236

Conread position: 113-421
Cow position:
Alignm length: 313
Alignm identity: 223
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 189, 61

Conread position: 117-271
Cow position:
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 132-562
Cow position:
Alignm length: 442
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 214

Conread position: 143-453
Cow position:
Alignm length: 316
Alignm identity: 214
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 51, 211

Conread position: 159-563
Cow position:
Alignm length: 416
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 187

Conread position: 181-563
Cow position:
Alignm length: 395
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 21

Conread position: 192-558
Cow position:
Alignm length: 375
Alignm identity: 247
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 169, 35

Conread position: 192-564
Cow position:
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 82

Conread position: 194-559
Cow position:
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 159

Conread position: 198-427
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 97, 50

Conread position: 216-560
Cow position:
Alignm length: 355
Alignm identity: 234
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 100, 129

Conread position: 231-482
Cow position:
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 83

Conread position: 232-411
Cow position:
Alignm length: 183
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 130, 110

Conread position: 237-360
Cow position:
Alignm length: 125
Alignm identity: 103
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 65, 108

Conread position: 247-560
Cow position:
Alignm length: 323
Alignm identity: 213
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 113, 21

Conread position: 257-531
Cow position:
Alignm length: 297
Alignm identity: 218
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 42, 90

Conread position: 268-473
Cow position:
Alignm length: 214
Alignm identity: 163
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 10, 78

Conread position: 268-567
Cow position:
Alignm length: 305
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 84

Conread position: 270-563
Cow position:
Alignm length: 304
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 42

Conread position: 297-563
Cow position:
Alignm length: 278
Alignm identity: 203
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 23, 55

Conread position: 343-564
Cow position:
Alignm length: 229
Alignm identity: 174
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 22, 0

Conread position: 347-560
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 26, 54

Conread position: 360-567
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 431-562
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 38, 105

Conread position: 431-562
Cow position:
Alignm length: 133
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 446-548
Cow position:
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 0

Show alignments to all cow chromosomes.