Cow genome map

Conread name: Utr1-UTR010045E09

Conread position: 4-521
Cow position:
Alignm length: 522
Alignm identity: 403
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 6

Conread position: 5-245
Cow position:
Alignm length: 241
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 5-410
Cow position:
Alignm length: 408
Alignm identity: 265
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 217, 19

Conread position: 5-420
Cow position:
Alignm length: 431
Alignm identity: 279
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 83, 169

Conread position: 5-549
Cow position:
Alignm length: 556
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 253, 32

Conread position: 5-549
Cow position:
Alignm length: 555
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 85

Conread position: 5-549
Cow position:
Alignm length: 555
Alignm identity: 405
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 85

Conread position: 5-563
Cow position:
Alignm length: 570
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 84

Conread position: 5-563
Cow position:
Alignm length: 564
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 90

Conread position: 6-165
Cow position:
Alignm length: 161
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 135, 83

Conread position: 6-178
Cow position:
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 6-194
Cow position:
Alignm length: 189
Alignm identity: 141
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 9, 0

Conread position: 6-211
Cow position:
Alignm length: 207
Alignm identity: 152
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 52, 84

Conread position: 6-271
Cow position:
Alignm length: 267
Alignm identity: 184
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 250, 76

Conread position: 6-277
Cow position:
Alignm length: 273
Alignm identity: 195
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 253, 83

Conread position: 6-320
Cow position:
Alignm length: 316
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-322
Cow position:
Alignm length: 321
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 6-466
Cow position:
Alignm length: 473
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 73

Conread position: 6-502
Cow position:
Alignm length: 515
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 184, 89

Conread position: 6-508
Cow position:
Alignm length: 511
Alignm identity: 385
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 89

Conread position: 6-538
Cow position:
Alignm length: 543
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-538
Cow position:
Alignm length: 544
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 261, 84

Conread position: 6-538
Cow position:
Alignm length: 542
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-538
Cow position:
Alignm length: 548
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 82

Conread position: 6-549
Cow position:
Alignm length: 553
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 90

Conread position: 6-549
Cow position:
Alignm length: 553
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 96

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 427
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-549
Cow position:
Alignm length: 553
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 407
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 84

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 84

Conread position: 6-549
Cow position:
Alignm length: 559
Alignm identity: 404
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 91

Conread position: 6-549
Cow position:
Alignm length: 554
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 53

Conread position: 6-549
Cow position:
Alignm length: 553
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 84

Conread position: 6-562
Cow position:
Alignm length: 568
Alignm identity: 429
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-562
Cow position:
Alignm length: 567
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 78

Conread position: 6-562
Cow position:
Alignm length: 566
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-562
Cow position:
Alignm length: 567
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-562
Cow position:
Alignm length: 584
Alignm identity: 434
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-563
Cow position:
Alignm length: 566
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 71

Conread position: 6-563
Cow position:
Alignm length: 564
Alignm identity: 433
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 89

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 89

Conread position: 6-563
Cow position:
Alignm length: 566
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 83

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-563
Cow position:
Alignm length: 573
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 67

Conread position: 6-563
Cow position:
Alignm length: 567
Alignm identity: 414
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 84

Conread position: 6-563
Cow position:
Alignm length: 569
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-563
Cow position:
Alignm length: 569
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 83

Conread position: 6-563
Cow position:
Alignm length: 562
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 83

Conread position: 6-563
Cow position:
Alignm length: 568
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 82

Conread position: 6-564
Cow position:
Alignm length: 575
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 168

Conread position: 6-564
Cow position:
Alignm length: 568
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 84

Conread position: 6-565
Cow position:
Alignm length: 570
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 358, 84

Conread position: 6-567
Cow position:
Alignm length: 581
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-567
Cow position:
Alignm length: 571
Alignm identity: 430
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 8-518
Cow position:
Alignm length: 520
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 7

Conread position: 8-563
Cow position:
Alignm length: 568
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 81

Conread position: 9-407
Cow position:
Alignm length: 409
Alignm identity: 259
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 86, 29

Conread position: 9-488
Cow position:
Alignm length: 495
Alignm identity: 312
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 282, 8

Conread position: 10-358
Cow position:
Alignm length: 353
Alignm identity: 244
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 104, 9

Conread position: 10-427
Cow position:
Alignm length: 420
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 85

Conread position: 10-515
Cow position:
Alignm length: 512
Alignm identity: 371
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 28

Conread position: 10-549
Cow position:
Alignm length: 550
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 62

Conread position: 10-559
Cow position:
Alignm length: 555
Alignm identity: 418
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 85

Conread position: 10-567
Cow position:
Alignm length: 569
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 75

Conread position: 11-427
Cow position:
Alignm length: 421
Alignm identity: 285
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 111, 85

Conread position: 11-539
Cow position:
Alignm length: 536
Alignm identity: 398
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 96

Conread position: 11-563
Cow position:
Alignm length: 561
Alignm identity: 431
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 79

Conread position: 12-279
Cow position:
Alignm length: 268
Alignm identity: 191
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 84, 0

Conread position: 12-282
Cow position:
Alignm length: 275
Alignm identity: 180
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 242, 60

Conread position: 12-549
Cow position:
Alignm length: 547
Alignm identity: 406
Alignm E-value: 0
Alignm gaps (pig, cow): 343, 83

Conread position: 12-562
Cow position:
Alignm length: 560
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 349, 78

Conread position: 13-566
Cow position:
Alignm length: 564
Alignm identity: 428
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 77

Conread position: 15-152
Cow position:
Alignm length: 138
Alignm identity: 104
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 15-522
Cow position:
Alignm length: 518
Alignm identity: 320
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 36

Conread position: 15-549
Cow position:
Alignm length: 545
Alignm identity: 413
Alignm E-value: 0
Alignm gaps (pig, cow): 283, 75

Conread position: 18-264
Cow position:
Alignm length: 248
Alignm identity: 169
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 77, 63

Conread position: 18-361
Cow position:
Alignm length: 344
Alignm identity: 230
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 78, 0

Conread position: 20-265
Cow position:
Alignm length: 247
Alignm identity: 185
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 155, 75

Conread position: 20-562
Cow position:
Alignm length: 557
Alignm identity: 390
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 79

Conread position: 22-510
Cow position:
Alignm length: 495
Alignm identity: 318
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 279, 62

Conread position: 24-397
Cow position:
Alignm length: 378
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 337, 67

Conread position: 24-559
Cow position:
Alignm length: 545
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 336, 86

Conread position: 29-530
Cow position:
Alignm length: 515
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 60

Conread position: 30-516
Cow position:
Alignm length: 491
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 386, 65

Conread position: 30-547
Cow position:
Alignm length: 526
Alignm identity: 396
Alignm E-value: 0
Alignm gaps (pig, cow): 269, 65

Conread position: 37-563
Cow position:
Alignm length: 547
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 53

Conread position: 40-562
Cow position:
Alignm length: 533
Alignm identity: 386
Alignm E-value: 0
Alignm gaps (pig, cow): 275, 50

Conread position: 43-412
Cow position:
Alignm length: 378
Alignm identity: 250
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 66

Conread position: 59-567
Cow position:
Alignm length: 518
Alignm identity: 379
Alignm E-value: 0
Alignm gaps (pig, cow): 302, 39

Conread position: 83-563
Cow position:
Alignm length: 500
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 7

Conread position: 89-412
Cow position:
Alignm length: 327
Alignm identity: 223
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 260, 82

Conread position: 101-563
Cow position:
Alignm length: 473
Alignm identity: 363
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 95

Conread position: 116-473
Cow position:
Alignm length: 367
Alignm identity: 271
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 44

Conread position: 116-496
Cow position:
Alignm length: 388
Alignm identity: 268
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 246, 100

Conread position: 120-394
Cow position:
Alignm length: 282
Alignm identity: 192
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 127, 136

Conread position: 126-427
Cow position:
Alignm length: 305
Alignm identity: 207
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 235, 141

Conread position: 126-427
Cow position:
Alignm length: 305
Alignm identity: 207
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 235, 141

Conread position: 129-550
Cow position:
Alignm length: 434
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 69

Conread position: 151-491
Cow position:
Alignm length: 348
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 137

Conread position: 161-322
Cow position:
Alignm length: 163
Alignm identity: 129
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 141, 86

Conread position: 177-549
Cow position:
Alignm length: 383
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 121, 168

Conread position: 177-563
Cow position:
Alignm length: 403
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 139

Conread position: 200-562
Cow position:
Alignm length: 373
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 145

Conread position: 216-523
Cow position:
Alignm length: 318
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 129

Conread position: 218-500
Cow position:
Alignm length: 287
Alignm identity: 182
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 61, 129

Conread position: 233-562
Cow position:
Alignm length: 339
Alignm identity: 227
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 63, 87

Conread position: 237-380
Cow position:
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 60, 106

Conread position: 254-562
Cow position:
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 98

Conread position: 263-427
Cow position:
Alignm length: 170
Alignm identity: 127
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 25, 90

Conread position: 263-565
Cow position:
Alignm length: 312
Alignm identity: 222
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 9, 48

Conread position: 268-559
Cow position:
Alignm length: 302
Alignm identity: 215
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 15, 78

Conread position: 275-403
Cow position:
Alignm length: 133
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 88, 69

Conread position: 305-567
Cow position:
Alignm length: 273
Alignm identity: 208
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 56, 39

Conread position: 312-523
Cow position:
Alignm length: 218
Alignm identity: 170
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 51, 39

Conread position: 314-530
Cow position:
Alignm length: 226
Alignm identity: 173
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 50, 37

Conread position: 318-539
Cow position:
Alignm length: 230
Alignm identity: 173
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 46, 14

Conread position: 360-564
Cow position:
Alignm length: 215
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 363-562
Cow position:
Alignm length: 208
Alignm identity: 157
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 15, 51

Conread position: 367-549
Cow position:
Alignm length: 190
Alignm identity: 143
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 6, 39

Conread position: 371-539
Cow position:
Alignm length: 175
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 34

Conread position: 375-559
Cow position:
Alignm length: 192
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 56, 39

Conread position: 386-564
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 52, 15

Show alignments to all cow chromosomes.