Cow genome map


           Conread name:
           Utr1-UTR010045E09
        

               Conread position:
               5-239
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               5-263
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               229, 63
               

               Conread position:
               5-361
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 85
               

               Conread position:
               5-523
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 86
               

               Conread position:
               5-550
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 83
               

               Conread position:
               5-562
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 85
               

               Conread position:
               5-563
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 90
               

               Conread position:
               5-564
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               449
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 212
               

               Conread position:
               6-211
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               76, 90
               

               Conread position:
               6-258
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               6-300
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 196
               

               Conread position:
               6-340
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 8
               

               Conread position:
               6-404
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               285
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               296, 85
               

               Conread position:
               6-473
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-515
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 83
               

               Conread position:
               6-538
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 82
               

               Conread position:
               6-539
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 89
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 32
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 85
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 90
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-558
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 34
               

               Conread position:
               6-559
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 89
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 85
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 9
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 82
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 89
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               298, 90
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-564
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-564
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 26
               

               Conread position:
               6-565
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 85
               

               Conread position:
               6-565
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 82
               

               Conread position:
               6-566
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 84
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 84
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 90
               

               Conread position:
               6-571
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               7-154
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               7-423
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               283
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               52, 12
               

               Conread position:
               8-339
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               217
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               164, 84
               

               Conread position:
               8-407
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 48
               

               Conread position:
               8-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 37
               

               Conread position:
               10-169
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               10-505
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               314
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               17, 81
               

               Conread position:
               10-549
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               312, 80
               

               Conread position:
               10-563
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 85
               

               Conread position:
               15-361
               

               Cow position:
               
               

               Alignm length:
               348
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 80
               

               Conread position:
               15-469
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 76
               

               Conread position:
               15-560
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 52
               

               Conread position:
               15-562
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 75
               

               Conread position:
               25-563
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 65
               

               Conread position:
               31-549
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 59
               

               Conread position:
               35-567
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 21
               

               Conread position:
               70-549
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               375
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 20
               

               Conread position:
               71-512
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 19
               

               Conread position:
               73-561
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               322
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               229, 23
               

               Conread position:
               105-562
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 162
               

               Conread position:
               115-359
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               53, 41
               

               Conread position:
               124-558
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 71
               

               Conread position:
               137-564
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 94
               

               Conread position:
               149-390
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               153, 102
               

               Conread position:
               166-550
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 32
               

               Conread position:
               231-427
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               165
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               71, 116
               

               Conread position:
               235-533
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 17
               

               Conread position:
               250-536
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               6, 54
               

               Conread position:
               269-560
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               33, 14
               

               Conread position:
               291-567
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               13, 54
               

               Conread position:
               360-549
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               12, 46
               

               Conread position:
               360-549
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               13, 46
               

               Conread position:
               391-549
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 91
               

               Conread position:
               403-570
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               430-564
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               38, 112
               
Show alignments to all cow chromosomes.