Cow genome map


           Conread name:
           Utr1-UTR010045E09
        

               Conread position:
               3-424
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               299, 87
               

               Conread position:
               3-562
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 12
               

               Conread position:
               4-522
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               348
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               88, 25
               

               Conread position:
               5-167
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               5-539
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               340
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               79, 25
               

               Conread position:
               5-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 85
               

               Conread position:
               5-549
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 85
               

               Conread position:
               5-562
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 85
               

               Conread position:
               5-563
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 91
               

               Conread position:
               5-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 86
               

               Conread position:
               6-121
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               6-135
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               6-144
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               6-265
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               248, 84
               

               Conread position:
               6-414
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 89
               

               Conread position:
               6-423
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               264
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               116, 90
               

               Conread position:
               6-482
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 39
               

               Conread position:
               6-537
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               354, 23
               

               Conread position:
               6-538
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-551
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 43
               

               Conread position:
               6-557
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               354, 84
               

               Conread position:
               6-559
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               300, 84
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 90
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 192
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 85
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 89
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 46
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 89
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 82
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               586
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 19
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 89
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 79
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 93
               

               Conread position:
               6-564
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 42
               

               Conread position:
               6-564
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 90
               

               Conread position:
               6-564
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-566
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 90
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               298, 89
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 89
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 84
               

               Conread position:
               7-557
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 77
               

               Conread position:
               7-559
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               354, 83
               

               Conread position:
               7-561
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 83
               

               Conread position:
               7-566
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               354, 77
               

               Conread position:
               8-562
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 82
               

               Conread position:
               8-572
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 82
               

               Conread position:
               9-537
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 47
               

               Conread position:
               10-549
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 80
               

               Conread position:
               10-549
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 86
               

               Conread position:
               10-562
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               371
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               182, 9
               

               Conread position:
               10-563
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               129, 65
               

               Conread position:
               10-566
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               351, 85
               

               Conread position:
               11-390
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               266
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               282, 89
               

               Conread position:
               12-413
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               271
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               194, 26
               

               Conread position:
               12-562
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 19
               

               Conread position:
               14-562
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 93
               

               Conread position:
               15-521
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 109
               

               Conread position:
               15-564
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 184
               

               Conread position:
               18-564
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 77
               

               Conread position:
               19-563
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               277, 71
               

               Conread position:
               20-322
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               276, 76
               

               Conread position:
               24-346
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 22
               

               Conread position:
               24-557
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               274, 71
               

               Conread position:
               32-558
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 64
               

               Conread position:
               34-564
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 59
               

               Conread position:
               59-549
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 36
               

               Conread position:
               59-560
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               333
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               243, 36
               

               Conread position:
               69-560
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               309
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               296, 35
               

               Conread position:
               70-561
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               323
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               234, 25
               

               Conread position:
               70-562
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 20
               

               Conread position:
               74-565
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 16
               

               Conread position:
               75-549
               

               Cow position:
               
               

               Alignm length:
               484
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 15
               

               Conread position:
               75-564
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               331
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               227, 20
               

               Conread position:
               79-568
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               317
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               117, 21
               

               Conread position:
               83-265
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               153, 146
               

               Conread position:
               84-500
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               38, 6
               

               Conread position:
               84-563
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 12
               

               Conread position:
               86-565
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               366
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 409
               

               Conread position:
               93-288
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               48, 103
               

               Conread position:
               110-413
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               190, 29
               

               Conread position:
               123-496
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               179, 83
               

               Conread position:
               127-337
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               69, 74
               

               Conread position:
               134-563
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 12
               

               Conread position:
               138-567
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 207
               

               Conread position:
               152-539
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 18
               

               Conread position:
               161-561
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               278
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               135, 13
               

               Conread position:
               177-563
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               187, 21
               

               Conread position:
               182-564
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 163
               

               Conread position:
               193-561
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 213
               

               Conread position:
               208-538
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 59
               

               Conread position:
               233-563
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 79
               

               Conread position:
               235-563
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 34
               

               Conread position:
               250-536
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               52, 29
               

               Conread position:
               260-563
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 87
               

               Conread position:
               305-564
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               59, 46
               

               Conread position:
               320-566
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               44, 24
               

               Conread position:
               325-517
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               37, 26
               

               Conread position:
               357-563
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               16, 61
               

               Conread position:
               371-557
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 34
               

               Conread position:
               376-563
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               48, 19
               

               Conread position:
               384-563
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 32
               

               Conread position:
               435-549
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               34, 0
               
Show alignments to all cow chromosomes.