Cow genome map


           Conread name:
           Utr1-UTR010045E09
        

               Conread position:
               4-521
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 44
               

               Conread position:
               4-549
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               298, 86
               

               Conread position:
               4-564
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               364
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               208, 22
               

               Conread position:
               5-251
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               5-531
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 85
               

               Conread position:
               5-563
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 281
               

               Conread position:
               5-563
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 86
               

               Conread position:
               6-271
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               164
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               6-287
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               6-396
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 83
               

               Conread position:
               6-423
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-458
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               311
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               79, 9
               

               Conread position:
               6-473
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-546
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-548
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 82
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 12
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 25
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-550
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 90
               

               Conread position:
               6-557
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 85
               

               Conread position:
               6-560
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 86
               

               Conread position:
               6-561
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 97
               

               Conread position:
               6-561
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 83
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 85
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 85
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               575
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 29
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 86
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               298, 17
               

               Conread position:
               6-564
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 38
               

               Conread position:
               6-564
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 92
               

               Conread position:
               6-564
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-564
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 82
               

               Conread position:
               6-566
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 14
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 206
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 78
               

               Conread position:
               7-137
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               7-563
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               262, 41
               

               Conread position:
               8-301
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               276, 11
               

               Conread position:
               8-489
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               350, 20
               

               Conread position:
               10-297
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 88
               

               Conread position:
               10-334
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 53
               

               Conread position:
               10-367
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               10-549
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 80
               

               Conread position:
               10-562
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 80
               

               Conread position:
               10-567
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               286, 85
               

               Conread position:
               12-536
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 83
               

               Conread position:
               15-563
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 30
               

               Conread position:
               15-564
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 49
               

               Conread position:
               15-564
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               348, 43
               

               Conread position:
               18-522
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 91
               

               Conread position:
               18-538
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               344, 77
               

               Conread position:
               30-297
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               239, 58
               

               Conread position:
               30-563
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 65
               

               Conread position:
               30-563
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 61
               

               Conread position:
               44-462
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               285
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               228, 112
               

               Conread position:
               84-563
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 6
               

               Conread position:
               93-563
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 98
               

               Conread position:
               94-565
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 122
               

               Conread position:
               150-567
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 195
               

               Conread position:
               158-533
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 187
               

               Conread position:
               233-328
               

               Cow position:
               
               

               Alignm length:
               97
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               245-562
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               43, 48
               

               Conread position:
               248-549
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 104
               

               Conread position:
               263-480
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               6, 93
               

               Conread position:
               271-564
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               17, 75
               

               Conread position:
               292-559
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               71, 23
               

               Conread position:
               293-562
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               208
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               6, 52
               

               Conread position:
               320-560
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               44, 31
               

               Conread position:
               348-508
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 60
               

               Conread position:
               386-549
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               386-563
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               42, 27
               

               Conread position:
               387-547
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               41, 18
               

               Conread position:
               394-562
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               35, 19
               

               Conread position:
               406-549
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               18, 0
               
Show alignments to all cow chromosomes.