Cow genome map


           Conread name:
           Utr1-UTR010045E09
        

               Conread position:
               1-558
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 84
               

               Conread position:
               2-563
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 93
               

               Conread position:
               4-221
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               15, 74
               

               Conread position:
               5-409
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 27
               

               Conread position:
               5-427
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 40
               

               Conread position:
               5-427
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 79
               

               Conread position:
               5-469
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 38
               

               Conread position:
               5-519
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 351
               

               Conread position:
               5-539
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 89
               

               Conread position:
               5-561
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               365
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               296, 85
               

               Conread position:
               6-167
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               6-225
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               177, 83
               

               Conread position:
               6-284
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               6-336
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 25
               

               Conread position:
               6-339
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 85
               

               Conread position:
               6-361
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 52
               

               Conread position:
               6-377
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               267
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               165, 17
               

               Conread position:
               6-424
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-427
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 85
               

               Conread position:
               6-464
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 18
               

               Conread position:
               6-521
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               278, 17
               

               Conread position:
               6-538
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 341
               

               Conread position:
               6-548
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 14
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 82
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 96
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 84
               

               Conread position:
               6-557
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               353, 43
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 83
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 90
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 52
               

               Conread position:
               6-564
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               366, 83
               

               Conread position:
               6-566
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               7-565
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 90
               

               Conread position:
               8-411
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               111, 32
               

               Conread position:
               10-307
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               213
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               236, 86
               

               Conread position:
               10-513
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               325
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               413, 85
               

               Conread position:
               10-549
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 65
               

               Conread position:
               10-549
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 80
               

               Conread position:
               10-562
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               351, 9
               

               Conread position:
               10-563
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 80
               

               Conread position:
               10-563
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 85
               

               Conread position:
               15-225
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               15-549
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 76
               

               Conread position:
               15-562
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 224
               

               Conread position:
               20-559
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               355
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               28, 85
               

               Conread position:
               27-354
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 72
               

               Conread position:
               31-563
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 39
               

               Conread position:
               35-564
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               267, 24
               

               Conread position:
               36-427
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 37
               

               Conread position:
               42-312
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               43-423
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 45
               

               Conread position:
               46-333
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               46-488
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               250, 49
               

               Conread position:
               61-564
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 29
               

               Conread position:
               81-323
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               14, 76
               

               Conread position:
               84-563
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               214, 6
               

               Conread position:
               104-516
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               257, 197
               

               Conread position:
               113-425
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               181, 218
               

               Conread position:
               116-427
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               180, 158
               

               Conread position:
               116-556
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 82
               

               Conread position:
               141-371
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               225, 73
               

               Conread position:
               152-449
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 46
               

               Conread position:
               204-549
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 28
               

               Conread position:
               231-548
               

               Cow position:
               
               

               Alignm length:
               329
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 23
               

               Conread position:
               231-549
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 125
               

               Conread position:
               244-536
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 32
               

               Conread position:
               268-564
               

               Cow position:
               
               

               Alignm length:
               307
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               34, 84
               

               Conread position:
               271-561
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               25, 74
               

               Conread position:
               271-562
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 57
               

               Conread position:
               271-563
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 81
               

               Conread position:
               314-557
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               49, 37
               

               Conread position:
               363-567
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               10, 43
               

               Conread position:
               371-567
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               61, 52
               

               Conread position:
               377-563
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               48, 37
               

               Conread position:
               379-567
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               443-562
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 0
               
Show alignments to all cow chromosomes.