• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
Utr1-UTR010045E09
        

               
Conread position:
               
3-408
               

               
Cow position:
               
chr2:10733595-10733196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
299, 11
               

               
Conread position:
               
4-288
               

               
Cow position:
               
chr2:43363941-43364218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
4-463
               

               
Cow position:
               
chr2:3749151-3749613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 11
               

               
Conread position:
               
5-328
               

               
Cow position:
               
chr2:1491181-1490865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 86
               

               
Conread position:
               
5-335
               

               
Cow position:
               
chr2:47604553-47604239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
313, 26
               

               
Conread position:
               
5-373
               

               
Cow position:
               
chr2:41149290-41149652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
5-411
               

               
Cow position:
               
chr2:6877735-6878126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 159
               

               
Conread position:
               
5-497
               

               
Cow position:
               
chr2:4235416-4235897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 91
               

               
Conread position:
               
5-549
               

               
Cow position:
               
chr2:47039168-47038624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 85
               

               
Conread position:
               
5-560
               

               
Cow position:
               
chr2:15580739-15580187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
5-561
               

               
Cow position:
               
chr2:63293332-63292763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
400
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 84
               

               
Conread position:
               
5-563
               

               
Cow position:
               
chr2:44935838-44935283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 71
               

               
Conread position:
               
5-563
               

               
Cow position:
               
chr2:46945913-46946471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 85
               

               
Conread position:
               
5-563
               

               
Cow position:
               
chr2:47810256-47810817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 79
               

               
Conread position:
               
5-567
               

               
Cow position:
               
chr2:49471487-49472055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 85
               

               
Conread position:
               
6-127
               

               
Cow position:
               
chr2:15578416-15578294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
6-139
               

               
Cow position:
               
chr2:2363397-2363527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
6-208
               

               
Cow position:
               
chr2:54736865-54737066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
6-214
               

               
Cow position:
               
chr2:27817018-27817225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
6-222
               

               
Cow position:
               
chr2:24921588-24921802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
6-225
               

               
Cow position:
               
chr2:36031814-36031611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
6-225
               

               
Cow position:
               
chr2:51305662-51305448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
190, 90
               

               
Conread position:
               
6-265
               

               
Cow position:
               
chr2:8117494-8117750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
6-277
               

               
Cow position:
               
chr2:45214014-45213744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
6-330
               

               
Cow position:
               
chr2:25888962-25888640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 84
               

               
Conread position:
               
6-333
               

               
Cow position:
               
chr2:5519748-5519419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 84
               

               
Conread position:
               
6-333
               

               
Cow position:
               
chr2:67421600-67421276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 84
               

               
Conread position:
               
6-374
               

               
Cow position:
               
chr2:782494-782142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
20, 73
               

               
Conread position:
               
6-409
               

               
Cow position:
               
chr2:976029-975631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
274, 84
               

               
Conread position:
               
6-414
               

               
Cow position:
               
chr2:20028035-20028437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
196, 79
               

               
Conread position:
               
6-424
               

               
Cow position:
               
chr2:52680670-52681082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
290, 86
               

               
Conread position:
               
6-427
               

               
Cow position:
               
chr2:32458765-32458347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 89
               

               
Conread position:
               
6-436
               

               
Cow position:
               
chr2:3729976-3730400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 85
               

               
Conread position:
               
6-437
               

               
Cow position:
               
chr2:12224907-12224474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 84
               

               
Conread position:
               
6-464
               

               
Cow position:
               
chr2:56438477-56438027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 23
               

               
Conread position:
               
6-473
               

               
Cow position:
               
chr2:24145519-24145984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 13
               

               
Conread position:
               
6-516
               

               
Cow position:
               
chr2:202409-201908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 89
               

               
Conread position:
               
6-518
               

               
Cow position:
               
chr2:85356525-85356019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 85
               

               
Conread position:
               
6-537
               

               
Cow position:
               
chr2:57334446-57334975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
402
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 84
               

               
Conread position:
               
6-538
               

               
Cow position:
               
chr2:283451-282913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 84
               

               
Conread position:
               
6-548
               

               
Cow position:
               
chr2:14560439-14560969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
417
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 89
               

               
Conread position:
               
6-548
               

               
Cow position:
               
chr2:51991288-51990741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 53
               

               
Conread position:
               
6-549
               

               
Cow position:
               
chr2:2413555-2413006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 84
               

               
Conread position:
               
6-549
               

               
Cow position:
               
chr2:5871087-5870564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 94
               

               
Conread position:
               
6-549
               

               
Cow position:
               
chr2:9907155-9907703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 82
               

               
Conread position:
               
6-549
               

               
Cow position:
               
chr2:25031233-25030686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 8
               

               
Conread position:
               
6-549
               

               
Cow position:
               
chr2:26920938-26921486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
414
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 84
               

               
Conread position:
               
6-549
               

               
Cow position:
               
chr2:39420837-39421369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
407
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 92
               

               
Conread position:
               
6-549
               

               
Cow position:
               
chr2:41656330-41656872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 84
               

               
Conread position:
               
6-549
               

               
Cow position:
               
chr2:44090541-44091091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 84
               

               
Conread position:
               
6-550
               

               
Cow position:
               
chr2:52152610-52152073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 85
               

               
Conread position:
               
6-551
               

               
Cow position:
               
chr2:78741377-78741925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
410
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 17
               

               
Conread position:
               
6-557
               

               
Cow position:
               
chr2:5481392-5480871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 89
               

               
Conread position:
               
6-559
               

               
Cow position:
               
chr2:2357214-2356666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
297, 67
               

               
Conread position:
               
6-559
               

               
Cow position:
               
chr2:2380370-2380907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 84
               

               
Conread position:
               
6-560
               

               
Cow position:
               
chr2:16288497-16289026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 42
               

               
Conread position:
               
6-561
               

               
Cow position:
               
chr2:78761729-78762272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 35
               

               
Conread position:
               
6-561
               

               
Cow position:
               
chr2:80516313-80516862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 43
               

               
Conread position:
               
6-562
               

               
Cow position:
               
chr2:6959987-6960550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 84
               

               
Conread position:
               
6-562
               

               
Cow position:
               
chr2:16077054-16076493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 87
               

               
Conread position:
               
6-562
               

               
Cow position:
               
chr2:49603973-49604519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
250, 39
               

               
Conread position:
               
6-562
               

               
Cow position:
               
chr2:52061911-52062470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 84
               

               
Conread position:
               
6-562
               

               
Cow position:
               
chr2:57142445-57141883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 84
               

               
Conread position:
               
6-563
               

               
Cow position:
               
chr2:422309-422872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
437
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 89
               

               
Conread position:
               
6-563
               

               
Cow position:
               
chr2:10844094-10843546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 85
               

               
Conread position:
               
6-563
               

               
Cow position:
               
chr2:11159885-11159323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 82
               

               
Conread position:
               
6-563
               

               
Cow position:
               
chr2:13046436-13045902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
365, 81
               

               
Conread position:
               
6-563
               

               
Cow position:
               
chr2:19009476-19010036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 17
               

               
Conread position:
               
6-563
               

               
Cow position:
               
chr2:22077030-22077591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 83
               

               
Conread position:
               
6-563
               

               
Cow position:
               
chr2:28650983-28650427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 84
               

               
Conread position:
               
6-563
               

               
Cow position:
               
chr2:42672142-42671584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 84
               

               
Conread position:
               
6-563
               

               
Cow position:
               
chr2:44345957-44346519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 94
               

               
Conread position:
               
6-563
               

               
Cow position:
               
chr2:44992038-44991492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 84
               

               
Conread position:
               
6-563
               

               
Cow position:
               
chr2:50983986-50983425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
435
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 84
               

               
Conread position:
               
6-563
               

               
Cow position:
               
chr2:53328993-53329550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 84
               

               
Conread position:
               
6-563
               

               
Cow position:
               
chr2:65939205-65938646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 83
               

               
Conread position:
               
6-563
               

               
Cow position:
               
chr2:72922587-72922027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 84
               

               
Conread position:
               
6-563
               

               
Cow position:
               
chr2:81256048-81256609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 205
               

               
Conread position:
               
6-564
               

               
Cow position:
               
chr2:5905606-5905058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 84
               

               
Conread position:
               
6-564
               

               
Cow position:
               
chr2:10269415-10268855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
425
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 78
               

               
Conread position:
               
6-564
               

               
Cow position:
               
chr2:41685755-41686323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
431
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 84
               

               
Conread position:
               
6-564
               

               
Cow position:
               
chr2:52615713-52616279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
432
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 84
               

               
Conread position:
               
6-565
               

               
Cow position:
               
chr2:176289-175722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
418
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 13
               

               
Conread position:
               
6-567
               

               
Cow position:
               
chr2:2185015-2184448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
433
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 84
               

               
Conread position:
               
6-567
               

               
Cow position:
               
chr2:3325325-3324756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 340
               

               
Conread position:
               
6-567
               

               
Cow position:
               
chr2:6772920-6772364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 39
               

               
Conread position:
               
6-567
               

               
Cow position:
               
chr2:32654593-32655146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 64
               

               
Conread position:
               
6-567
               

               
Cow position:
               
chr2:80956401-80955828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
577
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 344
               

               
Conread position:
               
6-567
               

               
Cow position:
               
chr2:82166859-82167417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 74
               

               
Conread position:
               
7-563
               

               
Cow position:
               
chr2:10186979-10186429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 89
               

               
Conread position:
               
7-563
               

               
Cow position:
               
chr2:50076847-50077400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
354, 82
               

               
Conread position:
               
8-334
               

               
Cow position:
               
chr2:32388811-32389127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 24
               

               
Conread position:
               
8-503
               

               
Cow position:
               
chr2:52655717-52656210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 87
               

               
Conread position:
               
8-559
               

               
Cow position:
               
chr2:1673403-1672867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 37
               

               
Conread position:
               
8-559
               

               
Cow position:
               
chr2:28621579-28621028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 21
               

               
Conread position:
               
9-221
               

               
Cow position:
               
chr2:75251007-75251210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
9-549
               

               
Cow position:
               
chr2:16899490-16900039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
430
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 96
               

               
Conread position:
               
10-221
               

               
Cow position:
               
chr2:37790901-37790697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
180, 67
               

               
Conread position:
               
10-557
               

               
Cow position:
               
chr2:59414434-59413882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
292, 80
               

               
Conread position:
               
11-360
               

               
Cow position:
               
chr2:43366679-43366338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
61, 86
               

               
Conread position:
               
11-428
               

               
Cow position:
               
chr2:72682885-72682468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 92
               

               
Conread position:
               
11-455
               

               
Cow position:
               
chr2:26865296-26864860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 79
               

               
Conread position:
               
11-465
               

               
Cow position:
               
chr2:67430313-67430749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
151, 84
               

               
Conread position:
               
11-565
               

               
Cow position:
               
chr2:20903882-20903363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
291, 62
               

               
Conread position:
               
12-538
               

               
Cow position:
               
chr2:42334020-42333511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 84
               

               
Conread position:
               
12-564
               

               
Cow position:
               
chr2:50321547-50322087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
281, 83
               

               
Conread position:
               
12-564
               

               
Cow position:
               
chr2:72109270-72108740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
52, 90
               

               
Conread position:
               
14-410
               

               
Cow position:
               
chr2:20921531-20921141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
288, 82
               

               
Conread position:
               
15-376
               

               
Cow position:
               
chr2:38372096-38372444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
84, 36
               

               
Conread position:
               
15-462
               

               
Cow position:
               
chr2:52174064-52173624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
346, 94
               

               
Conread position:
               
15-481
               

               
Cow position:
               
chr2:54649547-54649100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 119
               

               
Conread position:
               
15-502
               

               
Cow position:
               
chr2:80586354-80586850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
160, 80
               

               
Conread position:
               
15-549
               

               
Cow position:
               
chr2:212978-212431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 303
               

               
Conread position:
               
15-563
               

               
Cow position:
               
chr2:10712180-10711632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 81
               

               
Conread position:
               
18-298
               

               
Cow position:
               
chr2:75676617-75676348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
19-550
               

               
Cow position:
               
chr2:4405093-4404557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 69
               

               
Conread position:
               
20-558
               

               
Cow position:
               
chr2:769133-768589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 74
               

               
Conread position:
               
24-563
               

               
Cow position:
               
chr2:34565666-34565126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
394
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 6
               

               
Conread position:
               
25-563
               

               
Cow position:
               
chr2:11969500-11968965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 27
               

               
Conread position:
               
29-409
               

               
Cow position:
               
chr2:20876349-20875993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
333, 62
               

               
Conread position:
               
29-561
               

               
Cow position:
               
chr2:20874887-20874378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
333, 62
               

               
Conread position:
               
30-144
               

               
Cow position:
               
chr2:6879968-6880083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
30-469
               

               
Cow position:
               
chr2:43958892-43959318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
299, 34
               

               
Conread position:
               
33-563
               

               
Cow position:
               
chr2:41171958-41172484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 57
               

               
Conread position:
               
34-564
               

               
Cow position:
               
chr2:7901553-7902083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 46
               

               
Conread position:
               
35-412
               

               
Cow position:
               
chr2:27611812-27611440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
136, 72
               

               
Conread position:
               
35-563
               

               
Cow position:
               
chr2:26868547-26869071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 60
               

               
Conread position:
               
40-310
               

               
Cow position:
               
chr2:46465934-46465670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
44-536
               

               
Cow position:
               
chr2:7210985-7211477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 51
               

               
Conread position:
               
47-465
               

               
Cow position:
               
chr2:53552458-53552873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
279, 48
               

               
Conread position:
               
53-563
               

               
Cow position:
               
chr2:2102176-2101666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
308, 37
               

               
Conread position:
               
56-386
               

               
Cow position:
               
chr2:324525-324198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
100, 39
               

               
Conread position:
               
59-517
               

               
Cow position:
               
chr2:50402569-50403025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
62, 16
               

               
Conread position:
               
60-531
               

               
Cow position:
               
chr2:10294429-10294910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 16
               

               
Conread position:
               
61-519
               

               
Cow position:
               
chr2:61130989-61130573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
55, 29
               

               
Conread position:
               
67-359
               

               
Cow position:
               
chr2:40245362-40245649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
69-560
               

               
Cow position:
               
chr2:45921937-45921461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
53, 26
               

               
Conread position:
               
70-427
               

               
Cow position:
               
chr2:46402952-46402605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
22, 107
               

               
Conread position:
               
70-557
               

               
Cow position:
               
chr2:5814104-5813587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 20
               

               
Conread position:
               
83-468
               

               
Cow position:
               
chr2:10730236-10729849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 12
               

               
Conread position:
               
83-563
               

               
Cow position:
               
chr2:28792565-28793055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 7
               

               
Conread position:
               
88-563
               

               
Cow position:
               
chr2:44106769-44106305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 45
               

               
Conread position:
               
89-563
               

               
Cow position:
               
chr2:36979704-36980179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 63
               

               
Conread position:
               
93-563
               

               
Cow position:
               
chr2:53473830-53473357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 113
               

               
Conread position:
               
94-378
               

               
Cow position:
               
chr2:34475560-34475290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
100-563
               

               
Cow position:
               
chr2:28643784-28643329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
261, 173
               

               
Conread position:
               
101-559
               

               
Cow position:
               
chr2:28746807-28747261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
213, 64
               

               
Conread position:
               
104-561
               

               
Cow position:
               
chr2:290489-290031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
55, 19
               

               
Conread position:
               
118-562
               

               
Cow position:
               
chr2:15578222-15577768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 136
               

               
Conread position:
               
119-563
               

               
Cow position:
               
chr2:1490620-1490172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
128-468
               

               
Cow position:
               
chr2:73191301-73191630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
170, 78
               

               
Conread position:
               
134-387
               

               
Cow position:
               
chr2:34618105-34618357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
168, 41
               

               
Conread position:
               
142-557
               

               
Cow position:
               
chr2:2363558-2363982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 169
               

               
Conread position:
               
155-562
               

               
Cow position:
               
chr2:39621677-39622089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 112
               

               
Conread position:
               
156-564
               

               
Cow position:
               
chr2:3837590-3837205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 39
               

               
Conread position:
               
158-564
               

               
Cow position:
               
chr2:36054243-36053847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 75
               

               
Conread position:
               
180-544
               

               
Cow position:
               
chr2:14821926-14822286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 20
               

               
Conread position:
               
188-564
               

               
Cow position:
               
chr2:74391694-74391300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
80, 145
               

               
Conread position:
               
192-559
               

               
Cow position:
               
chr2:5485808-5485452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 13
               

               
Conread position:
               
200-369
               

               
Cow position:
               
chr2:3837726-3837897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
102, 43
               

               
Conread position:
               
227-563
               

               
Cow position:
               
chr2:24921860-24922204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 118
               

               
Conread position:
               
245-502
               

               
Cow position:
               
chr2:66309612-66309349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
65, 23
               

               
Conread position:
               
249-424
               

               
Cow position:
               
chr2:8118045-8118222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
15, 97
               

               
Conread position:
               
260-558
               

               
Cow position:
               
chr2:36031241-36030935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 127
               

               
Conread position:
               
263-550
               

               
Cow position:
               
chr2:10612130-10611835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 90
               

               
Conread position:
               
268-558
               

               
Cow position:
               
chr2:51305232-51304937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
46, 15
               

               
Conread position:
               
279-531
               

               
Cow position:
               
chr2:52350317-52350574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
23, 64
               

               
Conread position:
               
287-564
               

               
Cow position:
               
chr2:59963708-59963425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
9, 65
               

               
Conread position:
               
296-549
               

               
Cow position:
               
chr2:54737043-54737298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
128, 98
               

               
Conread position:
               
313-564
               

               
Cow position:
               
chr2:45213741-45213480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
50, 38
               

               
Conread position:
               
325-564
               

               
Cow position:
               
chr2:32389345-32389590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
326-530
               

               
Cow position:
               
chr2:47603893-47603688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
334-563
               

               
Cow position:
               
chr2:4926607-4926372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
29, 17
               

               
Conread position:
               
335-549
               

               
Cow position:
               
chr2:67419729-67419509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
346-564
               

               
Cow position:
               
chr2:28616625-28616403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
17, 153
               

               
Conread position:
               
348-549
               

               
Cow position:
               
chr2:2088591-2088383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
16, 69
               

               
Conread position:
               
348-562
               

               
Cow position:
               
chr2:5474098-5474319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
16, 60
               

               
Conread position:
               
431-562
               

               
Cow position:
               
chr2:49590072-49590204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
435-549
               

               
Cow position:
               
chr2:57588372-57588486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.