Cow genome map


           Conread name:
           Utr1-UTR010045E09
        

               Conread position:
               2-563
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 93
               

               Conread position:
               5-533
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 9
               

               Conread position:
               5-563
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 14
               

               Conread position:
               6-110
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               84
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-161
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               60, 85
               

               Conread position:
               6-162
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               6-241
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               6-286
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               6-317
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 79
               

               Conread position:
               6-350
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               298, 84
               

               Conread position:
               6-380
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 86
               

               Conread position:
               6-548
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 96
               

               Conread position:
               6-550
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 17
               

               Conread position:
               6-556
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 80
               

               Conread position:
               6-557
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 93
               

               Conread position:
               6-557
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 85
               

               Conread position:
               6-557
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               354, 89
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 342
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 88
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 83
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 13
               

               Conread position:
               7-563
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 83
               

               Conread position:
               8-348
               

               Cow position:
               
               

               Alignm length:
               343
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 83
               

               Conread position:
               10-356
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               185, 86
               

               Conread position:
               10-462
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               301
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               82, 166
               

               Conread position:
               11-280
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 44
               

               Conread position:
               11-359
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               258, 8
               

               Conread position:
               11-549
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 350
               

               Conread position:
               11-564
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 8
               

               Conread position:
               12-315
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               60, 92
               

               Conread position:
               15-348
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               115, 69
               

               Conread position:
               15-422
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 75
               

               Conread position:
               15-564
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               372
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               147, 25
               

               Conread position:
               32-539
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               330, 27
               

               Conread position:
               41-563
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 49
               

               Conread position:
               44-420
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               252
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               318, 51
               

               Conread position:
               45-281
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               144, 155
               

               Conread position:
               48-425
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               247, 42
               

               Conread position:
               60-410
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               236, 52
               

               Conread position:
               76-540
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               310
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               45, 20
               

               Conread position:
               84-563
               

               Cow position:
               
               

               Alignm length:
               490
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               215, 261
               

               Conread position:
               89-563
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               213, 86
               

               Conread position:
               126-560
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 337
               

               Conread position:
               143-567
               

               Cow position:
               
               

               Alignm length:
               435
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 202
               

               Conread position:
               154-566
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 103
               

               Conread position:
               156-557
               

               Cow position:
               
               

               Alignm length:
               412
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 42
               

               Conread position:
               200-545
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 145
               

               Conread position:
               212-564
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 133
               

               Conread position:
               320-564
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               44, 21
               

               Conread position:
               390-549
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               38, 11
               

               Conread position:
               432-562
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               39, 0
               
Show alignments to all cow chromosomes.