Cow genome map


           Conread name:
           Utr1-UTR010045E09
        

               Conread position:
               2-563
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 17
               

               Conread position:
               5-190
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               5-240
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               5-361
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 85
               

               Conread position:
               5-481
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 90
               

               Conread position:
               5-563
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 85
               

               Conread position:
               5-567
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 5
               

               Conread position:
               6-228
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               6-264
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               6-331
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 84
               

               Conread position:
               6-372
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               298, 39
               

               Conread position:
               6-394
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-402
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               227, 81
               

               Conread position:
               6-503
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 117
               

               Conread position:
               6-536
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 90
               

               Conread position:
               6-539
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 89
               

               Conread position:
               6-548
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               270, 84
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               581
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 174
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 84
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 83
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 78
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 20
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               252, 9
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 89
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 89
               

               Conread position:
               6-566
               

               Cow position:
               
               

               Alignm length:
               597
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 183
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               298, 83
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               298, 101
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               582
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 99
               

               Conread position:
               7-549
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 95
               

               Conread position:
               7-563
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 82
               

               Conread position:
               8-563
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 82
               

               Conread position:
               9-411
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 87
               

               Conread position:
               9-563
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 81
               

               Conread position:
               10-302
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 80
               

               Conread position:
               10-380
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 38
               

               Conread position:
               10-427
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               264
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               215, 57
               

               Conread position:
               10-508
               

               Cow position:
               
               

               Alignm length:
               509
               

               Alignm identity:
               368
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 87
               

               Conread position:
               10-522
               

               Cow position:
               
               

               Alignm length:
               525
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 82
               

               Conread position:
               10-563
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               353, 89
               

               Conread position:
               10-563
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 9
               

               Conread position:
               11-461
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 34
               

               Conread position:
               11-514
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               341
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               17, 24
               

               Conread position:
               15-332
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               292, 76
               

               Conread position:
               18-563
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 77
               

               Conread position:
               23-548
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               275, 67
               

               Conread position:
               25-548
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 64
               

               Conread position:
               25-563
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               382
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 52
               

               Conread position:
               29-509
               

               Cow position:
               
               

               Alignm length:
               496
               

               Alignm identity:
               320
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               66, 74
               

               Conread position:
               30-563
               

               Cow position:
               
               

               Alignm length:
               544
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 19
               

               Conread position:
               51-550
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               247, 45
               

               Conread position:
               89-518
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 254
               

               Conread position:
               92-548
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               182, 106
               

               Conread position:
               94-564
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 226
               

               Conread position:
               117-563
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 237
               

               Conread position:
               126-505
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               255
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               57, 49
               

               Conread position:
               128-469
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 217
               

               Conread position:
               128-549
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 217
               

               Conread position:
               181-563
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 164
               

               Conread position:
               206-563
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 25
               

               Conread position:
               235-557
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 26
               

               Conread position:
               253-563
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               224
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               27, 39
               

               Conread position:
               259-563
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 24
               

               Conread position:
               310-562
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               54, 41
               

               Conread position:
               331-563
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               33, 20
               

               Conread position:
               371-558
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               58, 43
               

               Conread position:
               372-562
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               98, 58
               

               Conread position:
               386-564
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               430-557
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               41, 0
               
Show alignments to all cow chromosomes.