Cow genome map


           Conread name:
           Utr1-UTR010045E09
        

               Conread position:
               3-488
               

               Cow position:
               
               

               Alignm length:
               498
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 88
               

               Conread position:
               5-287
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               8, 25
               

               Conread position:
               5-549
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 85
               

               Conread position:
               5-562
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 84
               

               Conread position:
               5-562
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 85
               

               Conread position:
               6-173
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               6-194
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               6-194
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               6-194
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               6-221
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               6-272
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               6-306
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               142, 14
               

               Conread position:
               6-408
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 17
               

               Conread position:
               6-424
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 83
               

               Conread position:
               6-473
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 39
               

               Conread position:
               6-521
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 87
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 84
               

               Conread position:
               6-557
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               301, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 89
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 83
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               395
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 80
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 90
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 90
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 81
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 82
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-565
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 42
               

               Conread position:
               6-566
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 84
               

               Conread position:
               6-566
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 83
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 78
               

               Conread position:
               8-194
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               148
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               8-491
               

               Cow position:
               
               

               Alignm length:
               493
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 21
               

               Conread position:
               9-561
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               365
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               43, 90
               

               Conread position:
               10-237
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               172
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               10-245
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               213, 79
               

               Conread position:
               11-503
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 46
               

               Conread position:
               12-561
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 79
               

               Conread position:
               16-538
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 54
               

               Conread position:
               18-299
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               189, 78
               

               Conread position:
               18-564
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               280, 15
               

               Conread position:
               20-549
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               279, 70
               

               Conread position:
               22-427
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 125
               

               Conread position:
               60-521
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               238, 30
               

               Conread position:
               74-546
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 273
               

               Conread position:
               83-563
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 7
               

               Conread position:
               89-561
               

               Cow position:
               
               

               Alignm length:
               501
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 279
               

               Conread position:
               96-562
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 64
               

               Conread position:
               123-505
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               264
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               152, 179
               

               Conread position:
               134-563
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 29
               

               Conread position:
               167-563
               

               Cow position:
               
               

               Alignm length:
               414
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 65
               

               Conread position:
               180-561
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               263
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               117, 55
               

               Conread position:
               182-551
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 57
               

               Conread position:
               200-563
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 84
               

               Conread position:
               202-566
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               9, 42
               

               Conread position:
               231-563
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 114
               

               Conread position:
               235-524
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               66, 103
               

               Conread position:
               250-538
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 96
               

               Conread position:
               250-563
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 102
               

               Conread position:
               255-427
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               33, 79
               

               Conread position:
               297-563
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               137, 42
               

               Conread position:
               325-564
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               38, 5
               

               Conread position:
               345-563
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               15, 9
               

               Conread position:
               360-563
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               360-564
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 63
               
Show alignments to all cow chromosomes.