Cow genome map
| Conread name: | Utr1-UTR010045E09 |
| Conread position: | 3-488 |
| Cow position: | chr23:34174883-34175369 (view UCSC Genome Browser custom track) |
| Alignm length: | 498 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 88 |
| Conread position: | 5-287 |
| Cow position: | chr23:19017408-19017676 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 8, 25 |
| Conread position: | 5-549 |
| Cow position: | chr23:15176776-15177322 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 419 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 85 |
| Conread position: | 5-562 |
| Cow position: | chr23:4434166-4434720 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 84 |
| Conread position: | 5-562 |
| Cow position: | chr23:31446516-31447079 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 85 |
| Conread position: | 6-173 |
| Cow position: | chr23:1141264-1141425 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 6-194 |
| Cow position: | chr23:1330583-1330400 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 6-194 |
| Cow position: | chr23:2725561-2725746 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 6-194 |
| Cow position: | chr23:16616162-16615979 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 6-221 |
| Cow position: | chr23:2716054-2716263 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 6-272 |
| Cow position: | chr23:8980786-8980525 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 6-306 |
| Cow position: | chr23:22875926-22875632 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 220 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 142, 14 |
| Conread position: | 6-408 |
| Cow position: | chr23:16481648-16481268 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 17 |
| Conread position: | 6-424 |
| Cow position: | chr23:11778188-11778590 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 83 |
| Conread position: | 6-473 |
| Cow position: | chr23:4815777-4816250 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 39 |
| Conread position: | 6-521 |
| Cow position: | chr23:5875069-5874559 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 87 |
| Conread position: | 6-549 |
| Cow position: | chr23:2313535-2312989 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 84 |
| Conread position: | 6-549 |
| Cow position: | chr23:4359532-4360081 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 84 |
| Conread position: | 6-549 |
| Cow position: | chr23:16617148-16616595 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 84 |
| Conread position: | 6-549 |
| Cow position: | chr23:20301914-20302463 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 84 |
| Conread position: | 6-549 |
| Cow position: | chr23:28216993-28217541 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 84 |
| Conread position: | 6-557 |
| Cow position: | chr23:19950881-19950324 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 84 |
| Conread position: | 6-563 |
| Cow position: | chr23:967645-967085 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 84 |
| Conread position: | 6-563 |
| Cow position: | chr23:988938-988383 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 232, 89 |
| Conread position: | 6-563 |
| Cow position: | chr23:2027413-2026854 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 84 |
| Conread position: | 6-563 |
| Cow position: | chr23:2795859-2795303 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 84 |
| Conread position: | 6-563 |
| Cow position: | chr23:3881992-3881440 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 83 |
| Conread position: | 6-563 |
| Cow position: | chr23:4509809-4510342 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 80 |
| Conread position: | 6-563 |
| Cow position: | chr23:4640922-4640359 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 84 |
| Conread position: | 6-563 |
| Cow position: | chr23:5779383-5778822 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 90 |
| Conread position: | 6-563 |
| Cow position: | chr23:15220195-15219626 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 84 |
| Conread position: | 6-563 |
| Cow position: | chr23:15525316-15525875 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 90 |
| Conread position: | 6-563 |
| Cow position: | chr23:19489243-19489807 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 251, 81 |
| Conread position: | 6-563 |
| Cow position: | chr23:22147556-22146989 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 82 |
| Conread position: | 6-563 |
| Cow position: | chr23:30636599-30636036 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 84 |
| Conread position: | 6-563 |
| Cow position: | chr23:36031666-36031107 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 84 |
| Conread position: | 6-565 |
| Cow position: | chr23:7273363-7273898 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 432 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 203, 42 |
| Conread position: | 6-566 |
| Cow position: | chr23:27399206-27399770 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 84 |
| Conread position: | 6-566 |
| Cow position: | chr23:28913115-28913663 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 83 |
| Conread position: | 6-567 |
| Cow position: | chr23:4276661-4277224 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 78 |
| Conread position: | 8-194 |
| Cow position: | chr23:31595472-31595288 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 8-491 |
| Cow position: | chr23:1025345-1024871 (view UCSC Genome Browser custom track) |
| Alignm length: | 493 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 21 |
| Conread position: | 9-561 |
| Cow position: | chr23:26835991-26836536 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 365 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 43, 90 |
| Conread position: | 10-237 |
| Cow position: | chr23:2765670-2765449 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 172 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 10-245 |
| Cow position: | chr23:2574272-2574506 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 213, 79 |
| Conread position: | 11-503 |
| Cow position: | chr23:3013341-3013851 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 379 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 46 |
| Conread position: | 12-561 |
| Cow position: | chr23:19332688-19332146 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 79 |
| Conread position: | 16-538 |
| Cow position: | chr23:2757293-2757834 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 54 |
| Conread position: | 18-299 |
| Cow position: | chr23:7750107-7750387 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 189, 78 |
| Conread position: | 18-564 |
| Cow position: | chr23:4751729-4752252 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 15 |
| Conread position: | 20-549 |
| Cow position: | chr23:4888397-4888924 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 70 |
| Conread position: | 22-427 |
| Cow position: | chr23:2340121-2340518 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 125 |
| Conread position: | 60-521 |
| Cow position: | chr23:2524439-2523974 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 238, 30 |
| Conread position: | 74-546 |
| Cow position: | chr23:14974794-14974315 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 273 |
| Conread position: | 83-563 |
| Cow position: | chr23:14965967-14965487 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 7 |
| Conread position: | 89-561 |
| Cow position: | chr23:20156449-20155955 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 279 |
| Conread position: | 96-562 |
| Cow position: | chr23:38578083-38578538 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 64 |
| Conread position: | 123-505 |
| Cow position: | chr23:6216393-6216777 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 264 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 152, 179 |
| Conread position: | 134-563 |
| Cow position: | chr23:25684229-25683799 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 29 |
| Conread position: | 167-563 |
| Cow position: | chr23:31591946-31591537 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 65 |
| Conread position: | 180-561 |
| Cow position: | chr23:7047185-7046792 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 263 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 117, 55 |
| Conread position: | 182-551 |
| Cow position: | chr23:29474676-29474310 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 57 |
| Conread position: | 200-563 |
| Cow position: | chr23:1327565-1327209 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 84 |
| Conread position: | 202-566 |
| Cow position: | chr23:10903428-10903805 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 258 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 9, 42 |
| Conread position: | 231-563 |
| Cow position: | chr23:2716316-2716653 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 114 |
| Conread position: | 235-524 |
| Cow position: | chr23:2763831-2763547 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 66, 103 |
| Conread position: | 250-538 |
| Cow position: | chr23:31595292-31594996 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 96 |
| Conread position: | 250-563 |
| Cow position: | chr23:2574481-2574800 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 102 |
| Conread position: | 255-427 |
| Cow position: | chr23:31651604-31651437 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 33, 79 |
| Conread position: | 297-563 |
| Cow position: | chr23:8980317-8980056 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 137, 42 |
| Conread position: | 325-564 |
| Cow position: | chr23:16615974-16615733 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 38, 5 |
| Conread position: | 345-563 |
| Cow position: | chr23:29452278-29452053 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 360-563 |
| Cow position: | chr23:2765396-2765188 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 360-564 |
| Cow position: | chr23:22875616-22875420 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 63 |
Show alignments to all cow chromosomes.