Cow genome map
Conread name: | Utr1-UTR010045E09 |
Conread position: | 2-567 |
Cow position: | chr24:35838841-35838265 (view UCSC Genome Browser custom track) |
Alignm length: | 585 |
Alignm identity: | 448 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 282, 93 |
Conread position: | 3-564 |
Cow position: | chr24:12568040-12568576 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 378 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 12 |
Conread position: | 5-139 |
Cow position: | chr24:37301290-37301161 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 105 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 48, 10 |
Conread position: | 5-173 |
Cow position: | chr24:12207930-12208092 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 123 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 5-256 |
Cow position: | chr24:13021459-13021705 (view UCSC Genome Browser custom track) |
Alignm length: | 252 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 5-317 |
Cow position: | chr24:12288935-12288630 (view UCSC Genome Browser custom track) |
Alignm length: | 314 |
Alignm identity: | 231 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 297, 90 |
Conread position: | 5-393 |
Cow position: | chr24:36296955-36297345 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 265 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 17, 92 |
Conread position: | 5-424 |
Cow position: | chr24:12131703-12131280 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 278 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 19, 195 |
Conread position: | 5-427 |
Cow position: | chr24:39678219-39678618 (view UCSC Genome Browser custom track) |
Alignm length: | 428 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 136, 82 |
Conread position: | 5-508 |
Cow position: | chr24:12939995-12940489 (view UCSC Genome Browser custom track) |
Alignm length: | 510 |
Alignm identity: | 316 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 291, 91 |
Conread position: | 5-548 |
Cow position: | chr24:12114246-12113711 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 249, 93 |
Conread position: | 5-559 |
Cow position: | chr24:12236844-12237400 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 289, 102 |
Conread position: | 5-562 |
Cow position: | chr24:6537349-6537886 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 373 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 356, 43 |
Conread position: | 5-565 |
Cow position: | chr24:16140873-16141419 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 344 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 8, 62 |
Conread position: | 6-137 |
Cow position: | chr24:20268006-20268136 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 100 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 6-137 |
Cow position: | chr24:37216515-37216651 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 112 |
Alignm E-value: | 8e-29 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 6-277 |
Cow position: | chr24:13181550-13181293 (view UCSC Genome Browser custom track) |
Alignm length: | 272 |
Alignm identity: | 198 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 6-361 |
Cow position: | chr24:2635908-2636260 (view UCSC Genome Browser custom track) |
Alignm length: | 357 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 84 |
Conread position: | 6-374 |
Cow position: | chr24:6645206-6645570 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 273 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 84 |
Conread position: | 6-380 |
Cow position: | chr24:7060890-7061264 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 84 |
Conread position: | 6-380 |
Cow position: | chr24:17187334-17187704 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 285 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 287, 85 |
Conread position: | 6-427 |
Cow position: | chr24:14390933-14390525 (view UCSC Genome Browser custom track) |
Alignm length: | 426 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 78 |
Conread position: | 6-532 |
Cow position: | chr24:15392515-15392020 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 389 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 355, 86 |
Conread position: | 6-533 |
Cow position: | chr24:44017334-44017867 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 84 |
Conread position: | 6-549 |
Cow position: | chr24:6025308-6024761 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 401 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 85 |
Conread position: | 6-549 |
Cow position: | chr24:12485529-12484980 (view UCSC Genome Browser custom track) |
Alignm length: | 554 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 84 |
Conread position: | 6-549 |
Cow position: | chr24:13187976-13188510 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 383 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 84 |
Conread position: | 6-549 |
Cow position: | chr24:22792965-22793509 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 289, 84 |
Conread position: | 6-549 |
Cow position: | chr24:33739554-33739003 (view UCSC Genome Browser custom track) |
Alignm length: | 561 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 265, 37 |
Conread position: | 6-557 |
Cow position: | chr24:6083805-6084362 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 84 |
Conread position: | 6-557 |
Cow position: | chr24:9188943-9188387 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 289, 84 |
Conread position: | 6-559 |
Cow position: | chr24:6335483-6336029 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 34 |
Conread position: | 6-562 |
Cow position: | chr24:6434029-6434590 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 84 |
Conread position: | 6-562 |
Cow position: | chr24:36707648-36708196 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 392 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 241, 31 |
Conread position: | 6-563 |
Cow position: | chr24:6145148-6145719 (view UCSC Genome Browser custom track) |
Alignm length: | 577 |
Alignm identity: | 424 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 94 |
Conread position: | 6-563 |
Cow position: | chr24:12085988-12086549 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 420 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 84 |
Conread position: | 6-563 |
Cow position: | chr24:14384823-14384264 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 355, 84 |
Conread position: | 6-563 |
Cow position: | chr24:19833172-19833736 (view UCSC Genome Browser custom track) |
Alignm length: | 571 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 84 |
Conread position: | 6-563 |
Cow position: | chr24:33933156-33933717 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 82 |
Conread position: | 6-564 |
Cow position: | chr24:36560290-36559735 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 294, 17 |
Conread position: | 6-567 |
Cow position: | chr24:8029939-8030506 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 436 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 84 |
Conread position: | 9-323 |
Cow position: | chr24:13531742-13531431 (view UCSC Genome Browser custom track) |
Alignm length: | 317 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 70, 80 |
Conread position: | 10-439 |
Cow position: | chr24:12224687-12224241 (view UCSC Genome Browser custom track) |
Alignm length: | 451 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 42 |
Conread position: | 10-469 |
Cow position: | chr24:12161673-12162130 (view UCSC Genome Browser custom track) |
Alignm length: | 466 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 186, 60 |
Conread position: | 10-523 |
Cow position: | chr24:14885443-14884943 (view UCSC Genome Browser custom track) |
Alignm length: | 530 |
Alignm identity: | 356 |
Alignm E-value: | 4.06377e-44 |
Alignm gaps (pig, cow): | 54, 9 |
Conread position: | 10-563 |
Cow position: | chr24:1447362-1447905 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 380 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 256, 79 |
Conread position: | 10-564 |
Cow position: | chr24:12797968-12797417 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 85 |
Conread position: | 10-564 |
Cow position: | chr24:16649510-16648966 (view UCSC Genome Browser custom track) |
Alignm length: | 565 |
Alignm identity: | 415 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 87 |
Conread position: | 10-564 |
Cow position: | chr24:35841821-35841271 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 86 |
Conread position: | 11-549 |
Cow position: | chr24:16084867-16084322 (view UCSC Genome Browser custom track) |
Alignm length: | 548 |
Alignm identity: | 402 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 291, 79 |
Conread position: | 11-561 |
Cow position: | chr24:14873548-14873001 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 285, 80 |
Conread position: | 15-564 |
Cow position: | chr24:6351993-6352533 (view UCSC Genome Browser custom track) |
Alignm length: | 559 |
Alignm identity: | 360 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 315, 80 |
Conread position: | 18-567 |
Cow position: | chr24:4415723-4415175 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 422 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 284, 72 |
Conread position: | 32-300 |
Cow position: | chr24:6511315-6511047 (view UCSC Genome Browser custom track) |
Alignm length: | 274 |
Alignm identity: | 179 |
Alignm E-value: | 4e-23 |
Alignm gaps (pig, cow): | 130, 52 |
Conread position: | 47-563 |
Cow position: | chr24:17303767-17303265 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 346 |
Alignm E-value: | 8e-40 |
Alignm gaps (pig, cow): | 201, 44 |
Conread position: | 50-562 |
Cow position: | chr24:14584927-14585426 (view UCSC Genome Browser custom track) |
Alignm length: | 518 |
Alignm identity: | 387 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 322, 14 |
Conread position: | 61-321 |
Cow position: | chr24:584363-584102 (view UCSC Genome Browser custom track) |
Alignm length: | 264 |
Alignm identity: | 176 |
Alignm E-value: | 7e-28 |
Alignm gaps (pig, cow): | 80, 34 |
Conread position: | 64-503 |
Cow position: | chr24:22951982-22952427 (view UCSC Genome Browser custom track) |
Alignm length: | 450 |
Alignm identity: | 348 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 235, 24 |
Conread position: | 70-567 |
Cow position: | chr24:148763-148262 (view UCSC Genome Browser custom track) |
Alignm length: | 512 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 20 |
Conread position: | 73-563 |
Cow position: | chr24:9092418-9091934 (view UCSC Genome Browser custom track) |
Alignm length: | 500 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 288, 17 |
Conread position: | 75-570 |
Cow position: | chr24:40548731-40549232 (view UCSC Genome Browser custom track) |
Alignm length: | 508 |
Alignm identity: | 376 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 229 |
Conread position: | 81-565 |
Cow position: | chr24:6515180-6514699 (view UCSC Genome Browser custom track) |
Alignm length: | 497 |
Alignm identity: | 324 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 209, 9 |
Conread position: | 87-427 |
Cow position: | chr24:38635630-38635963 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 247 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 109, 35 |
Conread position: | 89-563 |
Cow position: | chr24:12335922-12335424 (view UCSC Genome Browser custom track) |
Alignm length: | 503 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 107, 274 |
Conread position: | 116-561 |
Cow position: | chr24:40654286-40654733 (view UCSC Genome Browser custom track) |
Alignm length: | 460 |
Alignm identity: | 307 |
Alignm E-value: | 1.00053e-42 |
Alignm gaps (pig, cow): | 18, 59 |
Conread position: | 134-538 |
Cow position: | chr24:37216919-37217325 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 316 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 212 |
Conread position: | 135-347 |
Cow position: | chr24:35987428-35987228 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 159 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 146-371 |
Cow position: | chr24:14333027-14333251 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 156 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 9, 128 |
Conread position: | 146-536 |
Cow position: | chr24:32331252-32331639 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 269 |
Alignm E-value: | 8.99998e-41 |
Alignm gaps (pig, cow): | 61, 75 |
Conread position: | 162-565 |
Cow position: | chr24:6660665-6660245 (view UCSC Genome Browser custom track) |
Alignm length: | 423 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 167 |
Conread position: | 201-562 |
Cow position: | chr24:17696985-17696628 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 98, 22 |
Conread position: | 233-503 |
Cow position: | chr24:13524134-13524395 (view UCSC Genome Browser custom track) |
Alignm length: | 277 |
Alignm identity: | 197 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 128, 55 |
Conread position: | 270-563 |
Cow position: | chr24:29187334-29187634 (view UCSC Genome Browser custom track) |
Alignm length: | 304 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 82 |
Conread position: | 310-558 |
Cow position: | chr24:12288303-12288045 (view UCSC Genome Browser custom track) |
Alignm length: | 262 |
Alignm identity: | 187 |
Alignm E-value: | 1e-31 |
Alignm gaps (pig, cow): | 54, 41 |
Conread position: | 351-564 |
Cow position: | chr24:6645837-6646056 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 167 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 22, 54 |
Conread position: | 370-549 |
Cow position: | chr24:7061543-7061726 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 145 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 54, 35 |
Conread position: | 386-549 |
Cow position: | chr24:5993059-5992892 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 129 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 38, 19 |
Conread position: | 432-549 |
Cow position: | chr24:43813983-43814101 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 94 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.