Cow genome map

Conread name: Utr1-UTR010045E09

Conread position: 2-567
Cow position: chr24:35838841-35838265 (view UCSC Genome Browser custom track)
Alignm length: 585
Alignm identity: 448
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 93

Conread position: 3-564
Cow position: chr24:12568040-12568576 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 12

Conread position: 5-139
Cow position: chr24:37301290-37301161 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 10

Conread position: 5-173
Cow position: chr24:12207930-12208092 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 5-256
Cow position: chr24:13021459-13021705 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 0

Conread position: 5-317
Cow position: chr24:12288935-12288630 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 297, 90

Conread position: 5-393
Cow position: chr24:36296955-36297345 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 265
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 92

Conread position: 5-424
Cow position: chr24:12131703-12131280 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 195

Conread position: 5-427
Cow position: chr24:39678219-39678618 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 82

Conread position: 5-508
Cow position: chr24:12939995-12940489 (view UCSC Genome Browser custom track)
Alignm length: 510
Alignm identity: 316
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 291, 91

Conread position: 5-548
Cow position: chr24:12114246-12113711 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 249, 93

Conread position: 5-559
Cow position: chr24:12236844-12237400 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 399
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 102

Conread position: 5-562
Cow position: chr24:6537349-6537886 (view UCSC Genome Browser custom track)
Alignm length: 567
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 356, 43

Conread position: 5-565
Cow position: chr24:16140873-16141419 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 344
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 8, 62

Conread position: 6-137
Cow position: chr24:20268006-20268136 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 6-137
Cow position: chr24:37216515-37216651 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 112
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 6-277
Cow position: chr24:13181550-13181293 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 64, 0

Conread position: 6-361
Cow position: chr24:2635908-2636260 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-374
Cow position: chr24:6645206-6645570 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-380
Cow position: chr24:7060890-7061264 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-380
Cow position: chr24:17187334-17187704 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 85

Conread position: 6-427
Cow position: chr24:14390933-14390525 (view UCSC Genome Browser custom track)
Alignm length: 426
Alignm identity: 323
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 78

Conread position: 6-532
Cow position: chr24:15392515-15392020 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 86

Conread position: 6-533
Cow position: chr24:44017334-44017867 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-549
Cow position: chr24:6025308-6024761 (view UCSC Genome Browser custom track)
Alignm length: 552
Alignm identity: 401
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 85

Conread position: 6-549
Cow position: chr24:12485529-12484980 (view UCSC Genome Browser custom track)
Alignm length: 554
Alignm identity: 416
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-549
Cow position: chr24:13187976-13188510 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 383
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-549
Cow position: chr24:22792965-22793509 (view UCSC Genome Browser custom track)
Alignm length: 553
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 84

Conread position: 6-549
Cow position: chr24:33739554-33739003 (view UCSC Genome Browser custom track)
Alignm length: 561
Alignm identity: 411
Alignm E-value: 0
Alignm gaps (pig, cow): 265, 37

Conread position: 6-557
Cow position: chr24:6083805-6084362 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 84

Conread position: 6-557
Cow position: chr24:9188943-9188387 (view UCSC Genome Browser custom track)
Alignm length: 562
Alignm identity: 426
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 84

Conread position: 6-559
Cow position: chr24:6335483-6336029 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 34

Conread position: 6-562
Cow position: chr24:6434029-6434590 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 423
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 6-562
Cow position: chr24:36707648-36708196 (view UCSC Genome Browser custom track)
Alignm length: 569
Alignm identity: 392
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 31

Conread position: 6-563
Cow position: chr24:6145148-6145719 (view UCSC Genome Browser custom track)
Alignm length: 577
Alignm identity: 424
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 94

Conread position: 6-563
Cow position: chr24:12085988-12086549 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 420
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 84

Conread position: 6-563
Cow position: chr24:14384823-14384264 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 410
Alignm E-value: 0
Alignm gaps (pig, cow): 355, 84

Conread position: 6-563
Cow position: chr24:19833172-19833736 (view UCSC Genome Browser custom track)
Alignm length: 571
Alignm identity: 438
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 84

Conread position: 6-563
Cow position: chr24:33933156-33933717 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 417
Alignm E-value: 0
Alignm gaps (pig, cow): 296, 82

Conread position: 6-564
Cow position: chr24:36560290-36559735 (view UCSC Genome Browser custom track)
Alignm length: 568
Alignm identity: 432
Alignm E-value: 0
Alignm gaps (pig, cow): 294, 17

Conread position: 6-567
Cow position: chr24:8029939-8030506 (view UCSC Genome Browser custom track)
Alignm length: 572
Alignm identity: 436
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 84

Conread position: 9-323
Cow position: chr24:13531742-13531431 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 80

Conread position: 10-439
Cow position: chr24:12224687-12224241 (view UCSC Genome Browser custom track)
Alignm length: 451
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 42

Conread position: 10-469
Cow position: chr24:12161673-12162130 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 60

Conread position: 10-523
Cow position: chr24:14885443-14884943 (view UCSC Genome Browser custom track)
Alignm length: 530
Alignm identity: 356
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 54, 9

Conread position: 10-563
Cow position: chr24:1447362-1447905 (view UCSC Genome Browser custom track)
Alignm length: 563
Alignm identity: 380
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 79

Conread position: 10-564
Cow position: chr24:12797968-12797417 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 419
Alignm E-value: 0
Alignm gaps (pig, cow): 292, 85

Conread position: 10-564
Cow position: chr24:16649510-16648966 (view UCSC Genome Browser custom track)
Alignm length: 565
Alignm identity: 415
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 87

Conread position: 10-564
Cow position: chr24:35841821-35841271 (view UCSC Genome Browser custom track)
Alignm length: 566
Alignm identity: 394
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 86

Conread position: 11-549
Cow position: chr24:16084867-16084322 (view UCSC Genome Browser custom track)
Alignm length: 548
Alignm identity: 402
Alignm E-value: 0
Alignm gaps (pig, cow): 291, 79

Conread position: 11-561
Cow position: chr24:14873548-14873001 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 285, 80

Conread position: 15-564
Cow position: chr24:6351993-6352533 (view UCSC Genome Browser custom track)
Alignm length: 559
Alignm identity: 360
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 315, 80

Conread position: 18-567
Cow position: chr24:4415723-4415175 (view UCSC Genome Browser custom track)
Alignm length: 560
Alignm identity: 422
Alignm E-value: 0
Alignm gaps (pig, cow): 284, 72

Conread position: 32-300
Cow position: chr24:6511315-6511047 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 179
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 130, 52

Conread position: 47-563
Cow position: chr24:17303767-17303265 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 346
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 201, 44

Conread position: 50-562
Cow position: chr24:14584927-14585426 (view UCSC Genome Browser custom track)
Alignm length: 518
Alignm identity: 387
Alignm E-value: 0
Alignm gaps (pig, cow): 322, 14

Conread position: 61-321
Cow position: chr24:584363-584102 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 176
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 80, 34

Conread position: 64-503
Cow position: chr24:22951982-22952427 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 24

Conread position: 70-567
Cow position: chr24:148763-148262 (view UCSC Genome Browser custom track)
Alignm length: 512
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 20

Conread position: 73-563
Cow position: chr24:9092418-9091934 (view UCSC Genome Browser custom track)
Alignm length: 500
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 288, 17

Conread position: 75-570
Cow position: chr24:40548731-40549232 (view UCSC Genome Browser custom track)
Alignm length: 508
Alignm identity: 376
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 229

Conread position: 81-565
Cow position: chr24:6515180-6514699 (view UCSC Genome Browser custom track)
Alignm length: 497
Alignm identity: 324
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 209, 9

Conread position: 87-427
Cow position: chr24:38635630-38635963 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 35

Conread position: 89-563
Cow position: chr24:12335922-12335424 (view UCSC Genome Browser custom track)
Alignm length: 503
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 274

Conread position: 116-561
Cow position: chr24:40654286-40654733 (view UCSC Genome Browser custom track)
Alignm length: 460
Alignm identity: 307
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 18, 59

Conread position: 134-538
Cow position: chr24:37216919-37217325 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 212

Conread position: 135-347
Cow position: chr24:35987428-35987228 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 159
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 146-371
Cow position: chr24:14333027-14333251 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 9, 128

Conread position: 146-536
Cow position: chr24:32331252-32331639 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 269
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 61, 75

Conread position: 162-565
Cow position: chr24:6660665-6660245 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 167

Conread position: 201-562
Cow position: chr24:17696985-17696628 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 22

Conread position: 233-503
Cow position: chr24:13524134-13524395 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 197
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 128, 55

Conread position: 270-563
Cow position: chr24:29187334-29187634 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 82

Conread position: 310-558
Cow position: chr24:12288303-12288045 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 187
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 41

Conread position: 351-564
Cow position: chr24:6645837-6646056 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 54

Conread position: 370-549
Cow position: chr24:7061543-7061726 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 54, 35

Conread position: 386-549
Cow position: chr24:5993059-5992892 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 38, 19

Conread position: 432-549
Cow position: chr24:43813983-43814101 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 39, 0

Show alignments to all cow chromosomes.