Cow genome map


           Conread name:
           Utr1-UTR010045E09
        

               Conread position:
               2-567
               

               Cow position:
               
               

               Alignm length:
               585
               

               Alignm identity:
               448
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 93
               

               Conread position:
               3-564
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               378
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 12
               

               Conread position:
               5-139
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               48, 10
               

               Conread position:
               5-173
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               5-256
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               5-317
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 90
               

               Conread position:
               5-393
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 92
               

               Conread position:
               5-424
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 195
               

               Conread position:
               5-427
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 82
               

               Conread position:
               5-508
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               316
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               291, 91
               

               Conread position:
               5-548
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               249, 93
               

               Conread position:
               5-559
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 102
               

               Conread position:
               5-562
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               356, 43
               

               Conread position:
               5-565
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               344
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               8, 62
               

               Conread position:
               6-137
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               6-137
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               6-277
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               6-361
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-374
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-380
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-380
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 85
               

               Conread position:
               6-427
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 78
               

               Conread position:
               6-532
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               389
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 86
               

               Conread position:
               6-533
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 85
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               561
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 37
               

               Conread position:
               6-557
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-557
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 84
               

               Conread position:
               6-559
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 34
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               241, 31
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 94
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               243, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 82
               

               Conread position:
               6-564
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 17
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               436
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               9-323
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 80
               

               Conread position:
               10-439
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 42
               

               Conread position:
               10-469
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               186, 60
               

               Conread position:
               10-523
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               356
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               54, 9
               

               Conread position:
               10-563
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               256, 79
               

               Conread position:
               10-564
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 85
               

               Conread position:
               10-564
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 87
               

               Conread position:
               10-564
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 86
               

               Conread position:
               11-549
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               291, 79
               

               Conread position:
               11-561
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 80
               

               Conread position:
               15-564
               

               Cow position:
               
               

               Alignm length:
               559
               

               Alignm identity:
               360
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               315, 80
               

               Conread position:
               18-567
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 72
               

               Conread position:
               32-300
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               130, 52
               

               Conread position:
               47-563
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               346
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               201, 44
               

               Conread position:
               50-562
               

               Cow position:
               
               

               Alignm length:
               518
               

               Alignm identity:
               387
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               322, 14
               

               Conread position:
               61-321
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               80, 34
               

               Conread position:
               64-503
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               235, 24
               

               Conread position:
               70-567
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 20
               

               Conread position:
               73-563
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 17
               

               Conread position:
               75-570
               

               Cow position:
               
               

               Alignm length:
               508
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 229
               

               Conread position:
               81-565
               

               Cow position:
               
               

               Alignm length:
               497
               

               Alignm identity:
               324
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               209, 9
               

               Conread position:
               87-427
               

               Cow position:
               
               

               Alignm length:
               346
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 35
               

               Conread position:
               89-563
               

               Cow position:
               
               

               Alignm length:
               503
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 274
               

               Conread position:
               116-561
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               307
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               18, 59
               

               Conread position:
               134-538
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 212
               

               Conread position:
               135-347
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               146-371
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               9, 128
               

               Conread position:
               146-536
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               269
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               61, 75
               

               Conread position:
               162-565
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 167
               

               Conread position:
               201-562
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 22
               

               Conread position:
               233-503
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               128, 55
               

               Conread position:
               270-563
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 82
               

               Conread position:
               310-558
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               54, 41
               

               Conread position:
               351-564
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 54
               

               Conread position:
               370-549
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               54, 35
               

               Conread position:
               386-549
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               38, 19
               

               Conread position:
               432-549
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 0
               
Show alignments to all cow chromosomes.