Cow genome map


           Conread name:
           Utr1-UTR010045E09
        

               Conread position:
               3-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               357, 92
               

               Conread position:
               4-256
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               4-564
               

               Cow position:
               
               

               Alignm length:
               578
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               298, 100
               

               Conread position:
               5-419
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 85
               

               Conread position:
               5-508
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 90
               

               Conread position:
               5-560
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 81
               

               Conread position:
               5-563
               

               Cow position:
               
               

               Alignm length:
               571
               

               Alignm identity:
               435
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 14
               

               Conread position:
               5-564
               

               Cow position:
               
               

               Alignm length:
               565
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 90
               

               Conread position:
               6-265
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 197
               

               Conread position:
               6-310
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 40
               

               Conread position:
               6-548
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 90
               

               Conread position:
               6-556
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 89
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 89
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 78
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 57
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               427
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 89
               

               Conread position:
               6-564
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 50
               

               Conread position:
               6-566
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 105
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 84
               

               Conread position:
               6-582
               

               Cow position:
               
               

               Alignm length:
               584
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               10-289
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               10-321
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 85
               

               Conread position:
               11-548
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               246, 79
               

               Conread position:
               11-560
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               373
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               236, 80
               

               Conread position:
               12-516
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               351
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               19, 165
               

               Conread position:
               12-563
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               290, 78
               

               Conread position:
               12-564
               

               Cow position:
               
               

               Alignm length:
               577
               

               Alignm identity:
               373
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               301, 83
               

               Conread position:
               15-549
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               398
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               287, 75
               

               Conread position:
               15-557
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 94
               

               Conread position:
               35-549
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               261, 55
               

               Conread position:
               45-335
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               60-225
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               60-505
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               283
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               62, 35
               

               Conread position:
               60-539
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               242, 24
               

               Conread position:
               115-563
               

               Cow position:
               
               

               Alignm length:
               459
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 7
               

               Conread position:
               151-523
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 202
               

               Conread position:
               164-559
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 96
               

               Conread position:
               200-557
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 208
               

               Conread position:
               212-514
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               150, 130
               

               Conread position:
               230-549
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 122
               

               Conread position:
               245-555
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               59, 166
               

               Conread position:
               291-563
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               63, 41
               

               Conread position:
               297-563
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 54
               

               Conread position:
               431-562
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 0
               
Show alignments to all cow chromosomes.