Cow genome map
| Conread name: | Utr1-UTR010045E09 |
| Conread position: | 3-563 |
| Cow position: | chr25:18060844-18060295 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 92 |
| Conread position: | 4-256 |
| Cow position: | chr25:24171773-24172021 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 4-564 |
| Cow position: | chr25:36240290-36240857 (view UCSC Genome Browser custom track) |
| Alignm length: | 578 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 100 |
| Conread position: | 5-419 |
| Cow position: | chr25:33991312-33990902 (view UCSC Genome Browser custom track) |
| Alignm length: | 419 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 85 |
| Conread position: | 5-508 |
| Cow position: | chr25:18027885-18027373 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 90 |
| Conread position: | 5-560 |
| Cow position: | chr25:12759850-12759296 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 81 |
| Conread position: | 5-563 |
| Cow position: | chr25:17468948-17468395 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 14 |
| Conread position: | 5-564 |
| Cow position: | chr25:18092763-18093318 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 297, 90 |
| Conread position: | 6-265 |
| Cow position: | chr25:18411547-18411286 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 197 |
| Conread position: | 6-310 |
| Cow position: | chr25:34347246-34346943 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 40 |
| Conread position: | 6-548 |
| Cow position: | chr25:20777152-20776610 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 84 |
| Conread position: | 6-549 |
| Cow position: | chr25:19916828-19917377 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 406 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 90 |
| Conread position: | 6-556 |
| Cow position: | chr25:11375601-11375048 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 89 |
| Conread position: | 6-562 |
| Cow position: | chr25:25506395-25506955 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 89 |
| Conread position: | 6-563 |
| Cow position: | chr25:8674660-8675223 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 84 |
| Conread position: | 6-563 |
| Cow position: | chr25:14015922-14016472 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 78 |
| Conread position: | 6-563 |
| Cow position: | chr25:18890270-18889708 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 84 |
| Conread position: | 6-563 |
| Cow position: | chr25:22147240-22147802 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 57 |
| Conread position: | 6-563 |
| Cow position: | chr25:26279011-26279566 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 84 |
| Conread position: | 6-563 |
| Cow position: | chr25:34656700-34656139 (view UCSC Genome Browser custom track) |
| Alignm length: | 564 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 89 |
| Conread position: | 6-564 |
| Cow position: | chr25:11933777-11933223 (view UCSC Genome Browser custom track) |
| Alignm length: | 566 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 50 |
| Conread position: | 6-566 |
| Cow position: | chr25:13780781-13781342 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 105 |
| Conread position: | 6-567 |
| Cow position: | chr25:35362674-35362118 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 295, 84 |
| Conread position: | 6-582 |
| Cow position: | chr25:20629322-20629892 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 84 |
| Conread position: | 10-289 |
| Cow position: | chr25:18302526-18302817 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 10-321 |
| Cow position: | chr25:26866974-26867272 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 85 |
| Conread position: | 11-548 |
| Cow position: | chr25:26921981-26922508 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 79 |
| Conread position: | 11-560 |
| Cow position: | chr25:20494112-20494653 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 373 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 236, 80 |
| Conread position: | 12-516 |
| Cow position: | chr25:33243606-33244080 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 351 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 19, 165 |
| Conread position: | 12-563 |
| Cow position: | chr25:18276073-18275521 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 78 |
| Conread position: | 12-564 |
| Cow position: | chr25:19288596-19288038 (view UCSC Genome Browser custom track) |
| Alignm length: | 577 |
| Alignm identity: | 373 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 301, 83 |
| Conread position: | 15-549 |
| Cow position: | chr25:17589794-17589261 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 75 |
| Conread position: | 15-557 |
| Cow position: | chr25:18255601-18255071 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 94 |
| Conread position: | 35-549 |
| Cow position: | chr25:32579741-32580258 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 55 |
| Conread position: | 45-335 |
| Cow position: | chr25:18173143-18173436 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 60-225 |
| Cow position: | chr25:17563120-17562958 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 60-505 |
| Cow position: | chr25:24218314-24217871 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 283 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 62, 35 |
| Conread position: | 60-539 |
| Cow position: | chr25:17560811-17560349 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 242, 24 |
| Conread position: | 115-563 |
| Cow position: | chr25:12942847-12942393 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 7 |
| Conread position: | 151-523 |
| Cow position: | chr25:23345451-23345070 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 202 |
| Conread position: | 164-559 |
| Cow position: | chr25:33665967-33665570 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 96 |
| Conread position: | 200-557 |
| Cow position: | chr25:27022629-27022265 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 208 |
| Conread position: | 212-514 |
| Cow position: | chr25:18421618-18421928 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 150, 130 |
| Conread position: | 230-549 |
| Cow position: | chr25:18195131-18194805 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 122 |
| Conread position: | 245-555 |
| Cow position: | chr25:18645860-18645542 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 59, 166 |
| Conread position: | 291-563 |
| Cow position: | chr25:9544094-9544368 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 203 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 63, 41 |
| Conread position: | 297-563 |
| Cow position: | chr25:18303436-18303707 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 54 |
| Conread position: | 431-562 |
| Cow position: | chr25:6172077-6172209 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.