Cow genome map


           Conread name:
           Utr1-UTR010045E09
        

               Conread position:
               4-297
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               29, 15
               

               Conread position:
               5-567
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               357, 79
               

               Conread position:
               5-567
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 5
               

               Conread position:
               6-214
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               6-214
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               6-225
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               6-297
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               6-359
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 87
               

               Conread position:
               6-394
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               356, 9
               

               Conread position:
               6-427
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               342, 39
               

               Conread position:
               6-537
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 49
               

               Conread position:
               6-547
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 49
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 83
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 82
               

               Conread position:
               6-557
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               425
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 87
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 13
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               439
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 85
               

               Conread position:
               10-272
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               66, 34
               

               Conread position:
               10-465
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 47
               

               Conread position:
               10-557
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               396
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               288, 80
               

               Conread position:
               10-563
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               351, 86
               

               Conread position:
               12-269
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 187
               

               Conread position:
               12-468
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               285
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               83, 286
               

               Conread position:
               12-549
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 78
               

               Conread position:
               15-305
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               31-549
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               400
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 42
               

               Conread position:
               44-223
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               162, 51
               

               Conread position:
               83-561
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 13
               

               Conread position:
               99-306
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               102-265
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               128-330
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               174, 58
               

               Conread position:
               205-549
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 202
               

               Conread position:
               233-549
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 119
               

               Conread position:
               255-521
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 92
               

               Conread position:
               256-562
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 98
               

               Conread position:
               256-562
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 97
               

               Conread position:
               257-567
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 95
               

               Conread position:
               258-538
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               103, 21
               

               Conread position:
               276-549
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               22, 69
               

               Conread position:
               279-488
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               23, 66
               

               Conread position:
               283-563
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 36
               
Show alignments to all cow chromosomes.