Cow genome map
| Conread name: | Utr1-UTR010045E09 |
| Conread position: | 4-297 |
| Cow position: | chr26:12665737-12666024 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 211 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 5-567 |
| Cow position: | chr26:3691572-3692125 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 79 |
| Conread position: | 5-567 |
| Cow position: | chr26:12588799-12588233 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 5 |
| Conread position: | 6-214 |
| Cow position: | chr26:9850866-9850649 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 6-214 |
| Cow position: | chr26:9854332-9854115 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 6-225 |
| Cow position: | chr26:9112232-9112450 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 6-297 |
| Cow position: | chr26:6850408-6850119 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 6-359 |
| Cow position: | chr26:11537067-11536719 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 87 |
| Conread position: | 6-394 |
| Cow position: | chr26:11301565-11301942 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 258 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 356, 9 |
| Conread position: | 6-427 |
| Cow position: | chr26:20254837-20255240 (view UCSC Genome Browser custom track) |
| Alignm length: | 427 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 342, 39 |
| Conread position: | 6-537 |
| Cow position: | chr26:20262615-20263152 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 49 |
| Conread position: | 6-547 |
| Cow position: | chr26:3031043-3030517 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 49 |
| Conread position: | 6-549 |
| Cow position: | chr26:2198393-2198940 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 84 |
| Conread position: | 6-549 |
| Cow position: | chr26:2352592-2352046 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 83 |
| Conread position: | 6-549 |
| Cow position: | chr26:9563592-9563044 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 416 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 84 |
| Conread position: | 6-549 |
| Cow position: | chr26:18854854-18855402 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 82 |
| Conread position: | 6-557 |
| Cow position: | chr26:15144991-15144438 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 84 |
| Conread position: | 6-562 |
| Cow position: | chr26:5674933-5675486 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 425 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 87 |
| Conread position: | 6-563 |
| Cow position: | chr26:4605414-4604860 (view UCSC Genome Browser custom track) |
| Alignm length: | 563 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 13 |
| Conread position: | 6-563 |
| Cow position: | chr26:17397164-17396603 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 84 |
| Conread position: | 6-563 |
| Cow position: | chr26:19351747-19351186 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 439 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 84 |
| Conread position: | 6-567 |
| Cow position: | chr26:11254292-11253724 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 85 |
| Conread position: | 10-272 |
| Cow position: | chr26:28423927-28423667 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 66, 34 |
| Conread position: | 10-465 |
| Cow position: | chr26:16904550-16905001 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 323 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 47 |
| Conread position: | 10-557 |
| Cow position: | chr26:30782538-30783065 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 396 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 80 |
| Conread position: | 10-563 |
| Cow position: | chr26:12574623-12574081 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 351, 86 |
| Conread position: | 12-269 |
| Cow position: | chr26:23605128-23604873 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 187 |
| Conread position: | 12-468 |
| Cow position: | chr26:25033731-25034191 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 285 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 83, 286 |
| Conread position: | 12-549 |
| Cow position: | chr26:8869649-8870196 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 402 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 78 |
| Conread position: | 15-305 |
| Cow position: | chr26:3074302-3074584 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 31-549 |
| Cow position: | chr26:30589578-30589058 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 42 |
| Conread position: | 44-223 |
| Cow position: | chr26:6602010-6602189 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 162, 51 |
| Conread position: | 83-561 |
| Cow position: | chr26:12656138-12656598 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 13 |
| Conread position: | 99-306 |
| Cow position: | chr26:9845754-9845548 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 102-265 |
| Cow position: | chr26:12659829-12659666 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 128-330 |
| Cow position: | chr26:21350263-21350465 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 174, 58 |
| Conread position: | 205-549 |
| Cow position: | chr26:8918814-8919164 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 202 |
| Conread position: | 233-549 |
| Cow position: | chr26:18852211-18852533 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 119 |
| Conread position: | 255-521 |
| Cow position: | chr26:23603753-23603481 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 92 |
| Conread position: | 256-562 |
| Cow position: | chr26:9849913-9849599 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 98 |
| Conread position: | 256-562 |
| Cow position: | chr26:9853423-9853110 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 97 |
| Conread position: | 257-567 |
| Cow position: | chr26:9112753-9113070 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 95 |
| Conread position: | 258-538 |
| Cow position: | chr26:9845558-9845275 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 206 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 103, 21 |
| Conread position: | 276-549 |
| Cow position: | chr26:4806507-4806247 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 210 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 22, 69 |
| Conread position: | 279-488 |
| Cow position: | chr26:4334182-4334398 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 23, 66 |
| Conread position: | 283-563 |
| Cow position: | chr26:6849395-6849109 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 36 |
Show alignments to all cow chromosomes.