Cow genome map
| Conread name: | Utr1-UTR010045E09 |
| Conread position: | 2-563 |
| Cow position: | chr27:25002828-25002270 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 358, 94 |
| Conread position: | 4-563 |
| Cow position: | chr27:14460755-14460191 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 298, 66 |
| Conread position: | 5-427 |
| Cow position: | chr27:5906733-5907173 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 294 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 194, 20 |
| Conread position: | 5-562 |
| Cow position: | chr27:15541030-15541593 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 429 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 85 |
| Conread position: | 5-563 |
| Cow position: | chr27:9993499-9992938 (view UCSC Genome Browser custom track) |
| Alignm length: | 571 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 294, 47 |
| Conread position: | 6-213 |
| Cow position: | chr27:13897898-13898100 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 6-354 |
| Cow position: | chr27:25999352-25999018 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 246 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 40, 13 |
| Conread position: | 6-424 |
| Cow position: | chr27:28890434-28890845 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 271 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 188, 46 |
| Conread position: | 6-521 |
| Cow position: | chr27:2364454-2364973 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 84 |
| Conread position: | 6-528 |
| Cow position: | chr27:23334866-23335409 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 84 |
| Conread position: | 6-539 |
| Cow position: | chr27:25805178-25804655 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 296, 84 |
| Conread position: | 6-548 |
| Cow position: | chr27:26324517-26325065 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 84 |
| Conread position: | 6-549 |
| Cow position: | chr27:892915-893458 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 84 |
| Conread position: | 6-549 |
| Cow position: | chr27:16034689-16034143 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 26 |
| Conread position: | 6-557 |
| Cow position: | chr27:1209055-1209610 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 21 |
| Conread position: | 6-563 |
| Cow position: | chr27:5910570-5911128 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 43 |
| Conread position: | 6-563 |
| Cow position: | chr27:15278362-15277808 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 83 |
| Conread position: | 6-563 |
| Cow position: | chr27:27051367-27051949 (view UCSC Genome Browser custom track) |
| Alignm length: | 591 |
| Alignm identity: | 436 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 184, 90 |
| Conread position: | 6-563 |
| Cow position: | chr27:27662597-27663160 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 422 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 84 |
| Conread position: | 6-564 |
| Cow position: | chr27:26556272-26555739 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 409 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 42 |
| Conread position: | 6-567 |
| Cow position: | chr27:16439033-16439597 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 433 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 269, 86 |
| Conread position: | 7-187 |
| Cow position: | chr27:25116950-25117126 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 103, 51 |
| Conread position: | 8-214 |
| Cow position: | chr27:5997024-5996823 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 10-550 |
| Cow position: | chr27:26227007-26227538 (view UCSC Genome Browser custom track) |
| Alignm length: | 551 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 236, 77 |
| Conread position: | 18-350 |
| Cow position: | chr27:3996661-3996329 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 127, 78 |
| Conread position: | 138-287 |
| Cow position: | chr27:8561422-8561574 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 163-539 |
| Cow position: | chr27:22316442-22316824 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 177-557 |
| Cow position: | chr27:27753324-27752937 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 168 |
| Conread position: | 177-563 |
| Cow position: | chr27:16432297-16432681 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 44 |
| Conread position: | 236-482 |
| Cow position: | chr27:27197438-27197194 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 66, 112 |
| Conread position: | 240-530 |
| Cow position: | chr27:15638420-15638125 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 105 |
| Conread position: | 300-549 |
| Cow position: | chr27:8561541-8561792 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 33, 5 |
| Conread position: | 387-566 |
| Cow position: | chr27:28078533-28078714 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 60 |
Show alignments to all cow chromosomes.