Cow genome map


           Conread name:
           Utr1-UTR010045E09
        

               Conread position:
               4-229
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               11, 87
               

               Conread position:
               4-558
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 16
               

               Conread position:
               5-286
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               5-300
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 68
               

               Conread position:
               5-549
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 405
               

               Conread position:
               5-563
               

               Cow position:
               
               

               Alignm length:
               573
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               294, 85
               

               Conread position:
               6-193
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               6-253
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               6-253
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               6-296
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               6-420
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 70
               

               Conread position:
               6-422
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-427
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 38
               

               Conread position:
               6-518
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 84
               

               Conread position:
               6-534
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 84
               

               Conread position:
               6-536
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-536
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-548
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               269, 84
               

               Conread position:
               6-549
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               418
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               6-551
               

               Cow position:
               
               

               Alignm length:
               555
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 84
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 70
               

               Conread position:
               6-562
               

               Cow position:
               
               

               Alignm length:
               567
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 44
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 13
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               432
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 166
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               563
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               416
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 78
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 84
               

               Conread position:
               6-563
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 84
               

               Conread position:
               6-564
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 88
               

               Conread position:
               6-564
               

               Cow position:
               
               

               Alignm length:
               568
               

               Alignm identity:
               438
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 84
               

               Conread position:
               6-566
               

               Cow position:
               
               

               Alignm length:
               570
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               296, 84
               

               Conread position:
               6-566
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               355, 84
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               580
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 45
               

               Conread position:
               6-567
               

               Cow position:
               
               

               Alignm length:
               572
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               292, 84
               

               Conread position:
               7-306
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               7-553
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               430
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 12
               

               Conread position:
               10-370
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               146, 66
               

               Conread position:
               10-380
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               335, 14
               

               Conread position:
               10-558
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 103
               

               Conread position:
               10-563
               

               Cow position:
               
               

               Alignm length:
               562
               

               Alignm identity:
               417
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 82
               

               Conread position:
               10-567
               

               Cow position:
               
               

               Alignm length:
               569
               

               Alignm identity:
               426
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               289, 80
               

               Conread position:
               12-193
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               12-194
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               12-331
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               284, 86
               

               Conread position:
               12-549
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               399
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 11
               

               Conread position:
               15-497
               

               Cow position:
               
               

               Alignm length:
               492
               

               Alignm identity:
               317
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               346, 76
               

               Conread position:
               15-549
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               283, 30
               

               Conread position:
               15-557
               

               Cow position:
               
               

               Alignm length:
               560
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 114
               

               Conread position:
               30-339
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               31-252
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 59
               

               Conread position:
               31-537
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               394
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 59
               

               Conread position:
               31-562
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               268, 65
               

               Conread position:
               31-563
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               271, 59
               

               Conread position:
               32-266
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               53-564
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               247, 268
               

               Conread position:
               58-563
               

               Cow position:
               
               

               Alignm length:
               516
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 37
               

               Conread position:
               61-194
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               70-563
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 20
               

               Conread position:
               74-562
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               225, 16
               

               Conread position:
               83-549
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 7
               

               Conread position:
               90-468
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               92, 99
               

               Conread position:
               105-562
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               194, 26
               

               Conread position:
               113-561
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 250
               

               Conread position:
               116-287
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               38, 83
               

               Conread position:
               141-566
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 59
               

               Conread position:
               155-349
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               150
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               158-566
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 187
               

               Conread position:
               232-552
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               130, 62
               

               Conread position:
               236-563
               

               Cow position:
               
               

               Alignm length:
               339
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 5
               

               Conread position:
               243-563
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 89
               

               Conread position:
               243-563
               

               Cow position:
               
               

               Alignm length:
               331
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 109
               

               Conread position:
               254-563
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 99
               

               Conread position:
               291-559
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               11, 61
               

               Conread position:
               297-562
               

               Cow position:
               
               

               Alignm length:
               285
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               66, 11
               

               Conread position:
               297-564
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               67, 54
               

               Conread position:
               297-568
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 54
               

               Conread position:
               310-562
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               54, 44
               

               Conread position:
               349-521
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 57
               

               Conread position:
               363-549
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               12, 52
               

               Conread position:
               363-564
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               161
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               10, 51
               

               Conread position:
               382-567
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 32
               

               Conread position:
               393-562
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               33, 12
               

               Conread position:
               395-549
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 10
               

               Conread position:
               432-565
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               39, 0
               
Show alignments to all cow chromosomes.