Cow genome map
Conread name: | Utr1-UTR010045E09 |
Conread position: | 4-229 |
Cow position: | chr28:5796565-5796784 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 170 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 11, 87 |
Conread position: | 4-558 |
Cow position: | chr28:10619355-10618810 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 406 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 143, 16 |
Conread position: | 5-286 |
Cow position: | chr28:22827799-22828073 (view UCSC Genome Browser custom track) |
Alignm length: | 282 |
Alignm identity: | 197 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 86, 0 |
Conread position: | 5-300 |
Cow position: | chr28:17330774-17330487 (view UCSC Genome Browser custom track) |
Alignm length: | 297 |
Alignm identity: | 217 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 228, 68 |
Conread position: | 5-549 |
Cow position: | chr28:7822000-7822553 (view UCSC Genome Browser custom track) |
Alignm length: | 556 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 101, 405 |
Conread position: | 5-563 |
Cow position: | chr28:8378313-8378878 (view UCSC Genome Browser custom track) |
Alignm length: | 573 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 294, 85 |
Conread position: | 6-193 |
Cow position: | chr28:13522474-13522660 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 146 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 6-253 |
Cow position: | chr28:1168417-1168174 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 195 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 6-253 |
Cow position: | chr28:34593590-34593832 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 188 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 6-296 |
Cow position: | chr28:29819317-29819604 (view UCSC Genome Browser custom track) |
Alignm length: | 291 |
Alignm identity: | 224 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 84, 0 |
Conread position: | 6-420 |
Cow position: | chr28:26426525-26426117 (view UCSC Genome Browser custom track) |
Alignm length: | 419 |
Alignm identity: | 309 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 70 |
Conread position: | 6-422 |
Cow position: | chr28:15950728-15951142 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 323 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 84 |
Conread position: | 6-427 |
Cow position: | chr28:7816981-7817371 (view UCSC Genome Browser custom track) |
Alignm length: | 427 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 38 |
Conread position: | 6-518 |
Cow position: | chr28:15920719-15920200 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 385 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 289, 84 |
Conread position: | 6-534 |
Cow position: | chr28:5565608-5566134 (view UCSC Genome Browser custom track) |
Alignm length: | 538 |
Alignm identity: | 405 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 172, 84 |
Conread position: | 6-536 |
Cow position: | chr28:782145-782677 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 84 |
Conread position: | 6-536 |
Cow position: | chr28:17667765-17667231 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 419 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 84 |
Conread position: | 6-548 |
Cow position: | chr28:24587180-24587729 (view UCSC Genome Browser custom track) |
Alignm length: | 552 |
Alignm identity: | 408 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 269, 84 |
Conread position: | 6-549 |
Cow position: | chr28:14750295-14750842 (view UCSC Genome Browser custom track) |
Alignm length: | 553 |
Alignm identity: | 418 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 84 |
Conread position: | 6-551 |
Cow position: | chr28:8721695-8721152 (view UCSC Genome Browser custom track) |
Alignm length: | 555 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 268, 84 |
Conread position: | 6-562 |
Cow position: | chr28:1815120-1814559 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 70 |
Conread position: | 6-562 |
Cow position: | chr28:13459718-13460278 (view UCSC Genome Browser custom track) |
Alignm length: | 567 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 84 |
Conread position: | 6-563 |
Cow position: | chr28:1387643-1387091 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 44 |
Conread position: | 6-563 |
Cow position: | chr28:2591668-2592224 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 423 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 13 |
Conread position: | 6-563 |
Cow position: | chr28:7001735-7002299 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 84 |
Conread position: | 6-563 |
Cow position: | chr28:9953882-9954442 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 432 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 135, 166 |
Conread position: | 6-563 |
Cow position: | chr28:10582238-10581675 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 84 |
Conread position: | 6-563 |
Cow position: | chr28:12150069-12150613 (view UCSC Genome Browser custom track) |
Alignm length: | 563 |
Alignm identity: | 411 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 84 |
Conread position: | 6-563 |
Cow position: | chr28:14705924-14705362 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 416 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 78 |
Conread position: | 6-563 |
Cow position: | chr28:17388228-17388791 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 293, 84 |
Conread position: | 6-563 |
Cow position: | chr28:32792632-32792071 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 84 |
Conread position: | 6-564 |
Cow position: | chr28:5812456-5812999 (view UCSC Genome Browser custom track) |
Alignm length: | 566 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 88 |
Conread position: | 6-564 |
Cow position: | chr28:21358767-21359312 (view UCSC Genome Browser custom track) |
Alignm length: | 568 |
Alignm identity: | 438 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 355, 84 |
Conread position: | 6-566 |
Cow position: | chr28:2083351-2083908 (view UCSC Genome Browser custom track) |
Alignm length: | 570 |
Alignm identity: | 421 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 84 |
Conread position: | 6-566 |
Cow position: | chr28:18520714-18520145 (view UCSC Genome Browser custom track) |
Alignm length: | 576 |
Alignm identity: | 437 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 355, 84 |
Conread position: | 6-567 |
Cow position: | chr28:9155537-9154970 (view UCSC Genome Browser custom track) |
Alignm length: | 580 |
Alignm identity: | 434 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 45 |
Conread position: | 6-567 |
Cow position: | chr28:13441130-13440563 (view UCSC Genome Browser custom track) |
Alignm length: | 572 |
Alignm identity: | 431 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 292, 84 |
Conread position: | 7-306 |
Cow position: | chr28:15681641-15681933 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 234 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 88, 0 |
Conread position: | 7-553 |
Cow position: | chr28:7901103-7901661 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 430 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 234, 12 |
Conread position: | 10-370 |
Cow position: | chr28:9262898-9263242 (view UCSC Genome Browser custom track) |
Alignm length: | 365 |
Alignm identity: | 236 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 146, 66 |
Conread position: | 10-380 |
Cow position: | chr28:10591617-10591264 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 241 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 335, 14 |
Conread position: | 10-558 |
Cow position: | chr28:21325540-21326088 (view UCSC Genome Browser custom track) |
Alignm length: | 564 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 218, 103 |
Conread position: | 10-563 |
Cow position: | chr28:4381067-4380535 (view UCSC Genome Browser custom track) |
Alignm length: | 562 |
Alignm identity: | 417 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 82 |
Conread position: | 10-567 |
Cow position: | chr28:22261400-22260836 (view UCSC Genome Browser custom track) |
Alignm length: | 569 |
Alignm identity: | 426 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 289, 80 |
Conread position: | 12-193 |
Cow position: | chr28:18089248-18089071 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 129 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 12-194 |
Cow position: | chr28:2846740-2846565 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 137 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 77, 0 |
Conread position: | 12-331 |
Cow position: | chr28:32331648-32331335 (view UCSC Genome Browser custom track) |
Alignm length: | 321 |
Alignm identity: | 213 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 284, 86 |
Conread position: | 12-549 |
Cow position: | chr28:6780575-6780038 (view UCSC Genome Browser custom track) |
Alignm length: | 550 |
Alignm identity: | 399 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 150, 11 |
Conread position: | 15-497 |
Cow position: | chr28:18102170-18101700 (view UCSC Genome Browser custom track) |
Alignm length: | 492 |
Alignm identity: | 317 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 346, 76 |
Conread position: | 15-549 |
Cow position: | chr28:1952890-1953425 (view UCSC Genome Browser custom track) |
Alignm length: | 547 |
Alignm identity: | 403 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 283, 30 |
Conread position: | 15-557 |
Cow position: | chr28:34648693-34649247 (view UCSC Genome Browser custom track) |
Alignm length: | 560 |
Alignm identity: | 377 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 114 |
Conread position: | 30-339 |
Cow position: | chr28:24652062-24652360 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 238 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 31-252 |
Cow position: | chr28:5752105-5751884 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 173 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 147, 59 |
Conread position: | 31-537 |
Cow position: | chr28:1504627-1505135 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 394 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 268, 59 |
Conread position: | 31-562 |
Cow position: | chr28:15378220-15377684 (view UCSC Genome Browser custom track) |
Alignm length: | 539 |
Alignm identity: | 397 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 268, 65 |
Conread position: | 31-563 |
Cow position: | chr28:3193019-3192482 (view UCSC Genome Browser custom track) |
Alignm length: | 543 |
Alignm identity: | 410 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 271, 59 |
Conread position: | 32-266 |
Cow position: | chr28:2989909-2989683 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 174 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 53-564 |
Cow position: | chr28:10871266-10871777 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 214 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 247, 268 |
Conread position: | 58-563 |
Cow position: | chr28:24667380-24667888 (view UCSC Genome Browser custom track) |
Alignm length: | 516 |
Alignm identity: | 393 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 90, 37 |
Conread position: | 61-194 |
Cow position: | chr28:12648937-12648805 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 101 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 70-563 |
Cow position: | chr28:33252131-33252621 (view UCSC Genome Browser custom track) |
Alignm length: | 505 |
Alignm identity: | 371 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 232, 20 |
Conread position: | 74-562 |
Cow position: | chr28:12410395-12409917 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 225, 16 |
Conread position: | 83-549 |
Cow position: | chr28:5114976-5114516 (view UCSC Genome Browser custom track) |
Alignm length: | 477 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 216, 7 |
Conread position: | 90-468 |
Cow position: | chr28:24306834-24306453 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 243 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 92, 99 |
Conread position: | 105-562 |
Cow position: | chr28:7740340-7740789 (view UCSC Genome Browser custom track) |
Alignm length: | 468 |
Alignm identity: | 346 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 194, 26 |
Conread position: | 113-561 |
Cow position: | chr28:7790445-7789977 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 43, 250 |
Conread position: | 116-287 |
Cow position: | chr28:15035640-15035470 (view UCSC Genome Browser custom track) |
Alignm length: | 173 |
Alignm identity: | 134 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 38, 83 |
Conread position: | 141-566 |
Cow position: | chr28:9137168-9136740 (view UCSC Genome Browser custom track) |
Alignm length: | 436 |
Alignm identity: | 328 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 152, 59 |
Conread position: | 155-349 |
Cow position: | chr28:22233794-22233600 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 150 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 158-566 |
Cow position: | chr28:2724993-2724579 (view UCSC Genome Browser custom track) |
Alignm length: | 420 |
Alignm identity: | 312 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 140, 187 |
Conread position: | 232-552 |
Cow position: | chr28:22065765-22065445 (view UCSC Genome Browser custom track) |
Alignm length: | 328 |
Alignm identity: | 219 |
Alignm E-value: | 8e-32 |
Alignm gaps (pig, cow): | 130, 62 |
Conread position: | 236-563 |
Cow position: | chr28:5751730-5751396 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 260 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 5 |
Conread position: | 243-563 |
Cow position: | chr28:1167899-1167572 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 250 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 89 |
Conread position: | 243-563 |
Cow position: | chr28:34593961-34594288 (view UCSC Genome Browser custom track) |
Alignm length: | 331 |
Alignm identity: | 245 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 59, 109 |
Conread position: | 254-563 |
Cow position: | chr28:29819726-29820043 (view UCSC Genome Browser custom track) |
Alignm length: | 319 |
Alignm identity: | 232 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 99 |
Conread position: | 291-559 |
Cow position: | chr28:2846142-2845869 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 200 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 11, 61 |
Conread position: | 297-562 |
Cow position: | chr28:2989678-2989398 (view UCSC Genome Browser custom track) |
Alignm length: | 285 |
Alignm identity: | 205 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 66, 11 |
Conread position: | 297-564 |
Cow position: | chr28:1931947-1931672 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 202 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 67, 54 |
Conread position: | 297-568 |
Cow position: | chr28:5797470-5797746 (view UCSC Genome Browser custom track) |
Alignm length: | 281 |
Alignm identity: | 211 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 66, 54 |
Conread position: | 310-562 |
Cow position: | chr28:17324300-17324036 (view UCSC Genome Browser custom track) |
Alignm length: | 267 |
Alignm identity: | 188 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 54, 44 |
Conread position: | 349-521 |
Cow position: | chr28:22828104-22828283 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 143 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 12, 57 |
Conread position: | 363-549 |
Cow position: | chr28:22233293-22233104 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 139 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 12, 52 |
Conread position: | 363-564 |
Cow position: | chr28:10071089-10071290 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 161 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 10, 51 |
Conread position: | 382-567 |
Cow position: | chr28:13490275-13490466 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 142 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 47, 32 |
Conread position: | 393-562 |
Cow position: | chr28:30805552-30805379 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 131 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 33, 12 |
Conread position: | 395-549 |
Cow position: | chr28:6539124-6538966 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 125 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 31, 10 |
Conread position: | 432-565 |
Cow position: | chr28:24652939-24652805 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 103 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 39, 0 |
Show alignments to all cow chromosomes.